RNA–Protein interactions for RNA: ENST00000552422.5

CNOT2-238, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 3

Gene CNOT2, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-238	ENST00000552422	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	9.23	□□□□□ -0.93
CNOT2-238	ENST00000552422	ABTB2	Q8N961	1025 aa		9.23	□□□□□ -0.93
CNOT2-238	ENST00000552422	MAP2	P11137	1827 aa	Known RBP	9.23	□□□□□ -0.93
CNOT2-238	ENST00000552422	AFF2	P51816	1311 aa		9.23	□□□□□ -0.93
CNOT2-238	ENST00000552422	OVOS2	A0A0J9YW53	1432 aa		9.22	□□□□□ -0.93
CNOT2-238	ENST00000552422	OVOS2	Q6IE36	1432 aa		9.22	□□□□□ -0.93
CNOT2-238	ENST00000552422	BCL9L	Q86UU0	1499 aa		9.22	□□□□□ -0.93
CNOT2-238	ENST00000552422	WNK3	Q9BYP7	1800 aa		9.22	□□□□□ -0.93
CNOT2-238	ENST00000552422	ABCC6	O95255	1503 aa		9.22	□□□□□ -0.93
CNOT2-238	ENST00000552422	TERT	O14746	1132 aa	Known RBP	9.22	□□□□□ -0.93
CNOT2-238	ENST00000552422	RAB15	P59190	212 aa		9.22	□□□□□ -0.93
CNOT2-238	ENST00000552422	NFX1	Q12986	1120 aa	Known RBP	9.22	□□□□□ -0.93
CNOT2-238	ENST00000552422	C8orf37	Q96NL8	207 aa		9.22	□□□□□ -0.93
CNOT2-238	ENST00000552422	BRWD3	Q6RI45	1802 aa		9.21	□□□□□ -0.93
CNOT2-238	ENST00000552422	ZBBX	A8MT70	800 aa		9.21	□□□□□ -0.94
CNOT2-238	ENST00000552422	NUTM2G	Q5VZR2	741 aa		9.21	□□□□□ -0.94
CNOT2-238	ENST00000552422	ZNF772	Q68DY9	489 aa	Predicted RBP	9.21	□□□□□ -0.94
CNOT2-238	ENST00000552422	NLRP13	Q86W25	1043 aa		9.21	□□□□□ -0.94
CNOT2-238	ENST00000552422	FNBP4	Q8N3X1	1017 aa	Predicted RBP	9.21	□□□□□ -0.94
CNOT2-238	ENST00000552422	NGLY1	Q96IV0	654 aa		9.21	□□□□□ -0.94
CNOT2-238	ENST00000552422	TSEN34	Q9BSV6	310 aa	Known RBP	9.21	□□□□□ -0.94
CNOT2-238	ENST00000552422	CPD	O75976	1380 aa		9.21	□□□□□ -0.94
CNOT2-238	ENST00000552422	USP31	Q70CQ4	1352 aa		9.21	□□□□□ -0.94
CNOT2-238	ENST00000552422	GLI3	P10071	1580 aa		9.2	□□□□□ -0.94
CNOT2-238	ENST00000552422	FAM208A	Q9UK61	1670 aa	Known RBP	9.2	□□□□□ -0.94
CNOT2-238	ENST00000552422	APBB1	O00213	710 aa		9.2	□□□□□ -0.94
CNOT2-238	ENST00000552422	CBLB	Q13191	982 aa		9.2	□□□□□ -0.94
CNOT2-238	ENST00000552422	LCE2A	Q5TA79	106 aa	Predicted RBP	9.2	□□□□□ -0.94
CNOT2-238	ENST00000552422	MTMR14	Q8NCE2	650 aa		9.2	□□□□□ -0.94
CNOT2-238	ENST00000552422	NXF1	Q9UBU9	619 aa	Known RBP	9.2	□□□□□ -0.94
CNOT2-238	ENST00000552422	KIAA0232	Q92628	1395 aa		9.2	□□□□□ -0.94
CNOT2-238	ENST00000552422	ATRN	O75882	1429 aa		9.2	□□□□□ -0.94
CNOT2-238	ENST00000552422	SOBP	A7XYQ1	873 aa		9.19	□□□□□ -0.94
CNOT2-238	ENST00000552422	MAN1A2	O60476	641 aa		9.19	□□□□□ -0.94
CNOT2-238	ENST00000552422	FBXO45	P0C2W1	286 aa		9.19	□□□□□ -0.94
CNOT2-238	ENST00000552422	POTEA	Q6S8J7	498 aa		9.19	□□□□□ -0.94
CNOT2-238	ENST00000552422	NME9	Q86XW9	330 aa		9.19	□□□□□ -0.94
CNOT2-238	ENST00000552422	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	9.19	□□□□□ -0.94	1e-6	■■□□□ 11.9
CNOT2-238	ENST00000552422	SNRK	Q9NRH2	765 aa		9.19	□□□□□ -0.94
CNOT2-238	ENST00000552422	PCDHB9	Q9Y5E1	797 aa		9.19	□□□□□ -0.94
CNOT2-238	ENST00000552422	NDUFB9	Q9Y6M9	179 aa		9.19	□□□□□ -0.94
CNOT2-238	ENST00000552422	KIF7	Q2M1P5	1343 aa		9.19	□□□□□ -0.94
CNOT2-238	ENST00000552422	CDK12	Q9NYV4	1490 aa	Predicted RBP	9.19	□□□□□ -0.94
CNOT2-238	ENST00000552422	CAMTA1	Q9Y6Y1	1673 aa		9.19	□□□□□ -0.94
CNOT2-238	ENST00000552422	RGPD2	P0DJD1	1756 aa		9.19	□□□□□ -0.94
CNOT2-238	ENST00000552422	SOCS7	O14512	581 aa		9.18	□□□□□ -0.94
CNOT2-238	ENST00000552422	GC	P02774	474 aa		9.18	□□□□□ -0.94
CNOT2-238	ENST00000552422	SLC16A10	Q8TF71	515 aa		9.18	□□□□□ -0.94
CNOT2-238	ENST00000552422	NSD3	Q9BZ95	1437 aa		9.18	□□□□□ -0.94
CNOT2-238	ENST00000552422	USP21	Q9UK80	565 aa		9.18	□□□□□ -0.94
CNOT2-238	ENST00000552422	PEAK1	Q9H792	1746 aa		9.17	□□□□□ -0.94
CNOT2-238	ENST00000552422	THSD7A	Q9UPZ6	1657 aa		9.17	□□□□□ -0.94
CNOT2-238	ENST00000552422	CCDC7	Q96M83	1385 aa		9.17	□□□□□ -0.94
CNOT2-238	ENST00000552422	FAM83G	A6ND36	823 aa		9.17	□□□□□ -0.94
CNOT2-238	ENST00000552422	ILDR2	Q71H61	639 aa		9.17	□□□□□ -0.94
CNOT2-238	ENST00000552422	PRDM11	Q9NQV5	511 aa		9.17	□□□□□ -0.94
CNOT2-238	ENST00000552422	COL5A2	P05997	1499 aa	Predicted RBP	9.16	□□□□□ -0.94
CNOT2-238	ENST00000552422	VEGFB	P49765	207 aa		9.16	□□□□□ -0.94
CNOT2-238	ENST00000552422	ZC3H6	P61129	1189 aa	Known RBP	9.16	□□□□□ -0.94
CNOT2-238	ENST00000552422		Q6ZVU0	165 aa		9.16	□□□□□ -0.94
CNOT2-238	ENST00000552422	UNC5CL	Q8IV45	518 aa		9.16	□□□□□ -0.94
CNOT2-238	ENST00000552422	KCNH5	Q8NCM2	988 aa		9.16	□□□□□ -0.94
CNOT2-238	ENST00000552422	POLR3GL	Q9BT43	218 aa		9.16	□□□□□ -0.94
CNOT2-238	ENST00000552422	TMPRSS4	Q9NRS4	437 aa		9.16	□□□□□ -0.94
CNOT2-238	ENST00000552422	PARP4	Q9UKK3	1724 aa	Known RBP	9.16	□□□□□ -0.94
CNOT2-238	ENST00000552422	RGS12	O14924	1447 aa		9.15	□□□□□ -0.94
CNOT2-238	ENST00000552422	AATK	Q6ZMQ8	1374 aa		9.15	□□□□□ -0.94
CNOT2-238	ENST00000552422	WASHC2A	Q641Q2	1341 aa		9.15	□□□□□ -0.94
CNOT2-238	ENST00000552422	ESPN	B1AK53	854 aa		9.15	□□□□□ -0.94
CNOT2-238	ENST00000552422	ERVH48-1	M5A8F1	160 aa		9.15	□□□□□ -0.94
CNOT2-238	ENST00000552422	FYB1	O15117	783 aa		9.15	□□□□□ -0.94
CNOT2-238	ENST00000552422	NR1H3	Q13133	447 aa		9.15	□□□□□ -0.94
CNOT2-238	ENST00000552422	NPAS3	Q8IXF0	933 aa		9.15	□□□□□ -0.94
CNOT2-238	ENST00000552422	ZNF784	Q8NCA9	323 aa	Predicted RBP	9.15	□□□□□ -0.94
CNOT2-238	ENST00000552422	QTRT2	Q9H974	415 aa	Known RBP	9.15	□□□□□ -0.94
CNOT2-238	ENST00000552422	BTG4	Q9NY30	223 aa		9.15	□□□□□ -0.94
CNOT2-238	ENST00000552422	TRPC5	Q9UL62	973 aa	Predicted RBP	9.15	□□□□□ -0.94
CNOT2-238	ENST00000552422	CGNL1	Q0VF96	1302 aa		9.14	□□□□□ -0.95
CNOT2-238	ENST00000552422	ZEB1	P37275	1124 aa	Predicted RBP	9.14	□□□□□ -0.95
CNOT2-238	ENST00000552422	RBM6	P78332	1123 aa	Known RBP	9.14	□□□□□ -0.95
CNOT2-238	ENST00000552422	CHRNA2	Q15822	529 aa		9.14	□□□□□ -0.95
CNOT2-238	ENST00000552422	ARHGEF25	Q86VW2	580 aa		9.14	□□□□□ -0.95
CNOT2-238	ENST00000552422	SEPT12	Q8IYM1	358 aa		9.14	□□□□□ -0.95
CNOT2-238	ENST00000552422	AGBL1	Q96MI9	1066 aa		9.14	□□□□□ -0.95
CNOT2-238	ENST00000552422	ZNF330	Q9Y3S2	320 aa	Predicted RBP	9.14	□□□□□ -0.95
CNOT2-238	ENST00000552422	NSD2	O96028	1365 aa		9.13	□□□□□ -0.95
CNOT2-238	ENST00000552422	TTLL8	A6PVC2	850 aa		9.13	□□□□□ -0.95
CNOT2-238	ENST00000552422	RXRB	P28702	533 aa		9.13	□□□□□ -0.95
CNOT2-238	ENST00000552422	RELB	Q01201	579 aa		9.13	□□□□□ -0.95
CNOT2-238	ENST00000552422	VPS72	Q15906	364 aa		9.13	□□□□□ -0.95
CNOT2-238	ENST00000552422	COG3	Q96JB2	828 aa		9.13	□□□□□ -0.95
CNOT2-238	ENST00000552422	PANK3	Q9H999	370 aa		9.13	□□□□□ -0.95
CNOT2-238	ENST00000552422	LRRC37A3	O60309	1634 aa		9.13	□□□□□ -0.95
CNOT2-238	ENST00000552422	SPINT1	O43278	529 aa		9.12	□□□□□ -0.95
CNOT2-238	ENST00000552422	GIGYF1	O75420	1035 aa	Predicted RBP	9.12	□□□□□ -0.95
CNOT2-238	ENST00000552422	ZNF592	Q92610	1267 aa		9.12	□□□□□ -0.95
CNOT2-238	ENST00000552422	GGNBP2	Q9H3C7	697 aa		9.12	□□□□□ -0.95
CNOT2-238	ENST00000552422	PRM3	Q9NNZ6	103 aa		9.12	□□□□□ -0.95
CNOT2-238	ENST00000552422	DNMT3L	Q9UJW3	386 aa		9.12	□□□□□ -0.95
CNOT2-238	ENST00000552422	BLM	P54132	1417 aa	Predicted RBP	9.12	□□□□□ -0.95

Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms