RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 CSF1RP07333 972 aa16.86■□□□□ 0.29
RAB3IP-216ENST00000552199 CASTP20810 708 aaKnown RBP16.86■□□□□ 0.29
RAB3IP-216ENST00000552199 CREB3L3Q68CJ9 461 aa16.86■□□□□ 0.29
RAB3IP-216ENST00000552199 NEUROD6Q96NK8 337 aa16.86■□□□□ 0.29
RAB3IP-216ENST00000552199 FBXO3Q9UK99 471 aa16.86■□□□□ 0.29
RAB3IP-216ENST00000552199 ANKRD36CQ5JPF3 1778 aa16.86■□□□□ 0.29
RAB3IP-216ENST00000552199 CDHR2Q9BYE9 1310 aa16.86■□□□□ 0.29
RAB3IP-216ENST00000552199 ZKSCAN1P17029 563 aaPredicted RBP16.86■□□□□ 0.29
RAB3IP-216ENST00000552199 KCNJ4P48050 445 aa16.86■□□□□ 0.29
RAB3IP-216ENST00000552199 AK2P54819 239 aa16.86■□□□□ 0.29
RAB3IP-216ENST00000552199 TIMM10P62072 90 aa16.86■□□□□ 0.29
RAB3IP-216ENST00000552199 NLRP10Q86W26 655 aa16.86■□□□□ 0.29
RAB3IP-216ENST00000552199 DNAJC2Q99543 621 aaKnown RBP16.86■□□□□ 0.29
RAB3IP-216ENST00000552199 PUS3Q9BZE2 481 aaKnown RBP16.86■□□□□ 0.29
RAB3IP-216ENST00000552199 ZSWIM6Q9HCJ5 1215 aa16.86■□□□□ 0.29
RAB3IP-216ENST00000552199 ZNF609O15014 1411 aa16.85■□□□□ 0.29
RAB3IP-216ENST00000552199 JCADQ9P266 1359 aa16.85■□□□□ 0.29
RAB3IP-216ENST00000552199 SPATA31A5Q5VU36 1347 aa16.85■□□□□ 0.29
RAB3IP-216ENST00000552199 SPATA31A7Q8IWB4 1347 aa16.85■□□□□ 0.29
RAB3IP-216ENST00000552199 NWD2Q9ULI1 1742 aa16.85■□□□□ 0.29
RAB3IP-216ENST00000552199 NUTM2BA6NNL0 878 aaPredicted RBP16.85■□□□□ 0.29
RAB3IP-216ENST00000552199 NUTM2EB1AL46 878 aaPredicted RBP16.85■□□□□ 0.29
RAB3IP-216ENST00000552199 IL6STP40189 918 aaPredicted RBP16.85■□□□□ 0.29
RAB3IP-216ENST00000552199 ADCK5Q3MIX3 580 aa16.85■□□□□ 0.29
RAB3IP-216ENST00000552199 NUTM2AQ8IVF1 878 aaPredicted RBP16.85■□□□□ 0.29
RAB3IP-216ENST00000552199 JAKMIP1Q96N16 626 aaKnown RBP16.85■□□□□ 0.29
RAB3IP-216ENST00000552199 LIMCH1Q9UPQ0 1083 aa16.85■□□□□ 0.29
RAB3IP-216ENST00000552199 NDUFB9Q9Y6M9 179 aa16.85■□□□□ 0.29
RAB3IP-216ENST00000552199 NUP98P52948 1817 aa16.85■□□□□ 0.29
RAB3IP-216ENST00000552199 ERVV-1B6SEH8 477 aa16.84■□□□□ 0.29
RAB3IP-216ENST00000552199 RUFY3Q7L099 469 aa16.84■□□□□ 0.29
RAB3IP-216ENST00000552199 ZNF589Q86UQ0 364 aaPredicted RBP16.84■□□□□ 0.29
RAB3IP-216ENST00000552199 CEP126Q9P2H0 1117 aa16.84■□□□□ 0.29
RAB3IP-216ENST00000552199 SLC27A2O14975 620 aa16.84■□□□□ 0.29
RAB3IP-216ENST00000552199 CPA1P15085 419 aa16.84■□□□□ 0.29
RAB3IP-216ENST00000552199 GPTP24298 496 aa16.84■□□□□ 0.29
RAB3IP-216ENST00000552199 VPS53Q5VIR6 699 aa16.84■□□□□ 0.29
RAB3IP-216ENST00000552199 MARCH10Q8NA82 808 aaPredicted RBP16.84■□□□□ 0.29
RAB3IP-216ENST00000552199 CYP46A1Q9Y6A2 500 aa16.84■□□□□ 0.29
RAB3IP-216ENST00000552199 TOM1O60784 492 aa16.83■□□□□ 0.28
RAB3IP-216ENST00000552199 TAF5LO75529 589 aa16.83■□□□□ 0.28
RAB3IP-216ENST00000552199 MCTP1Q6DN14 999 aa16.83■□□□□ 0.28
RAB3IP-216ENST00000552199 KBTBD3Q8NAB2 608 aa16.83■□□□□ 0.28
RAB3IP-216ENST00000552199 PDRG1Q9NUG6 133 aa16.83■□□□□ 0.28
RAB3IP-216ENST00000552199 CCDC9Q9Y3X0 531 aaKnown RBP16.83■□□□□ 0.28
RAB3IP-216ENST00000552199 A0A1B0GUL7 405 aa16.82■□□□□ 0.28
RAB3IP-216ENST00000552199 BRD1O95696 1058 aa16.82■□□□□ 0.28
RAB3IP-216ENST00000552199 PIP4K2BP78356 416 aa16.82■□□□□ 0.28
RAB3IP-216ENST00000552199 IFIT5Q13325 482 aaKnown RBP16.82■□□□□ 0.28
RAB3IP-216ENST00000552199 L1TD1Q5T7N2 865 aaKnown RBP16.82■□□□□ 0.28
RAB3IP-216ENST00000552199 RNF20Q5VTR2 975 aa16.82■□□□□ 0.28
RAB3IP-216ENST00000552199 BARGINQ6ZT62 677 aa16.82■□□□□ 0.28
RAB3IP-216ENST00000552199 DDX46Q7L014 1031 aaKnown RBP16.82■□□□□ 0.28
RAB3IP-216ENST00000552199 TICAM2Q86XR7 235 aa16.82■□□□□ 0.28
RAB3IP-216ENST00000552199 DZIP3Q86Y13 1208 aaKnown RBP16.82■□□□□ 0.28
RAB3IP-216ENST00000552199 SYNE4Q8N205 404 aa16.82■□□□□ 0.28
RAB3IP-216ENST00000552199 SLIT2O94813 1529 aa16.82■□□□□ 0.28
RAB3IP-216ENST00000552199 FSD2A1L4K1 749 aa16.82■□□□□ 0.28
RAB3IP-216ENST00000552199 PAG1Q9NWQ8 432 aa16.82■□□□□ 0.28
RAB3IP-216ENST00000552199 PALLDQ8WX93 1383 aa16.82■□□□□ 0.28
RAB3IP-216ENST00000552199 PSMA5P28066 241 aa16.81■□□□□ 0.28
RAB3IP-216ENST00000552199 MCMDC2Q4G0Z9 681 aa16.81■□□□□ 0.28
RAB3IP-216ENST00000552199 TAF7LQ5H9L4 462 aa16.81■□□□□ 0.28
RAB3IP-216ENST00000552199 USPL1Q5W0Q7 1092 aa16.81■□□□□ 0.28
RAB3IP-216ENST00000552199 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.81■□□□□ 0.28
RAB3IP-216ENST00000552199 ACSBG1Q96GR2 724 aa16.81■□□□□ 0.28
RAB3IP-216ENST00000552199 CCDC85AQ96PX6 553 aaPredicted RBP16.81■□□□□ 0.28
RAB3IP-216ENST00000552199 TBC1D2BQ9UPU7 963 aa16.81■□□□□ 0.28
RAB3IP-216ENST00000552199 AKAP2Q9Y2D5 859 aa16.81■□□□□ 0.28
RAB3IP-216ENST00000552199 RPAP1Q9BWH6 1393 aaPredicted RBP16.81■□□□□ 0.28
RAB3IP-216ENST00000552199 MYH3P11055 1940 aa16.81■□□□□ 0.28
RAB3IP-216ENST00000552199 TSGA10IPQ3SY00 556 aa16.8■□□□□ 0.28
RAB3IP-216ENST00000552199 INTS5Q6P9B9 1019 aaKnown RBP16.8■□□□□ 0.28
RAB3IP-216ENST00000552199 TTLL11Q8NHH1 800 aa16.8■□□□□ 0.28
RAB3IP-216ENST00000552199 ZSCAN31Q96LW9 406 aaPredicted RBP16.8■□□□□ 0.28
RAB3IP-216ENST00000552199 HMG20BQ9P0W2 317 aa16.8■□□□□ 0.28
RAB3IP-216ENST00000552199 SPEF2Q9C093 1822 aa16.8■□□□□ 0.28
RAB3IP-216ENST00000552199 GOLGA6L3A6NEY3 463 aa16.8■□□□□ 0.28
RAB3IP-216ENST00000552199 GOLIM4O00461 696 aa16.8■□□□□ 0.28
RAB3IP-216ENST00000552199 IFIT1P09914 478 aaKnown RBP16.8■□□□□ 0.28
RAB3IP-216ENST00000552199 EIF5P55010 431 aaKnown RBP16.8■□□□□ 0.28
RAB3IP-216ENST00000552199 ZNF34Q8IZ26 560 aa16.8■□□□□ 0.28
RAB3IP-216ENST00000552199 LARP6Q9BRS8 491 aaKnown RBP16.8■□□□□ 0.28
RAB3IP-216ENST00000552199 LMBRD1Q9NUN5 540 aa16.8■□□□□ 0.28
RAB3IP-216ENST00000552199 CCDC87Q9NVE4 849 aa16.8■□□□□ 0.28
RAB3IP-216ENST00000552199 TRMT112Q9UI30 125 aaKnown RBP16.8■□□□□ 0.28
RAB3IP-216ENST00000552199 SH3TC1Q8TE82 1336 aa16.79■□□□□ 0.28
RAB3IP-216ENST00000552199 IRS4O14654 1257 aaPredicted RBP16.79■□□□□ 0.28
RAB3IP-216ENST00000552199 CHGBP05060 677 aa16.79■□□□□ 0.28
RAB3IP-216ENST00000552199 CTSWP56202 376 aa16.79■□□□□ 0.28
RAB3IP-216ENST00000552199 KLHL40Q2TBA0 621 aa16.79■□□□□ 0.28
RAB3IP-216ENST00000552199 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.79■□□□□ 0.28
RAB3IP-216ENST00000552199 A0A0G2JS52 829 aa16.78■□□□□ 0.28
RAB3IP-216ENST00000552199 ATP6V1AP38606 617 aa16.78■□□□□ 0.28
RAB3IP-216ENST00000552199 SEC62Q99442 399 aaKnown RBP16.78■□□□□ 0.28
RAB3IP-216ENST00000552199 SH2B1Q9NRF2 756 aaPredicted RBP16.78■□□□□ 0.28
RAB3IP-216ENST00000552199 DDX49Q9Y6V7 483 aaKnown RBP16.78■□□□□ 0.28
RAB3IP-216ENST00000552199 RREB1Q92766 1687 aa16.78■□□□□ 0.28
RAB3IP-216ENST00000552199 LOC102724428A0A0B4J2F2 783 aa16.78■□□□□ 0.28
RAB3IP-216ENST00000552199 PDE8AO60658 829 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms