RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 CRAMP1Q96RY5 1269 aa13.95□□□□□ -0.18
SLC48A1-209ENST00000552003 RTFDC1Q9BY42 306 aaPredicted RBP13.95□□□□□ -0.18
SLC48A1-209ENST00000552003 RBBP6Q7Z6E9 1792 aaKnown RBP13.95□□□□□ -0.18
SLC48A1-209ENST00000552003 NPM2Q86SE8 214 aaKnown RBP13.94□□□□□ -0.18
SLC48A1-209ENST00000552003 OTUD5Q96G74 571 aa13.94□□□□□ -0.18
SLC48A1-209ENST00000552003 NUP98P52948 1817 aa13.94□□□□□ -0.18
SLC48A1-209ENST00000552003 EN2P19622 333 aaPredicted RBP13.93□□□□□ -0.18
SLC48A1-209ENST00000552003 GTF2E1P29083 439 aaPredicted RBP13.93□□□□□ -0.18
SLC48A1-209ENST00000552003 TRIM26Q12899 539 aaPredicted RBP13.93□□□□□ -0.18
SLC48A1-209ENST00000552003 MOB2Q70IA6 237 aa13.93□□□□□ -0.18
SLC48A1-209ENST00000552003 RPGRQ92834 1020 aaKnown RBP13.93□□□□□ -0.18
SLC48A1-209ENST00000552003 VPS33BQ9H267 617 aa13.93□□□□□ -0.18
SLC48A1-209ENST00000552003 ATP6V0A2Q9Y487 856 aa13.93□□□□□ -0.18
SLC48A1-209ENST00000552003 UBN2Q6ZU65 1347 aa13.92□□□□□ -0.18
SLC48A1-209ENST00000552003 H7C1D1 291 aa13.92□□□□□ -0.18
SLC48A1-209ENST00000552003 RGL2O15211 777 aa13.92□□□□□ -0.18
SLC48A1-209ENST00000552003 KIAA2012Q0VF49 1180 aa13.92□□□□□ -0.18
SLC48A1-209ENST00000552003 TEFQ10587 303 aa13.92□□□□□ -0.18
SLC48A1-209ENST00000552003 DUOX1Q9NRD9 1551 aa13.92□□□□□ -0.18
SLC48A1-209ENST00000552003 TNIP1Q15025 636 aa13.91□□□□□ -0.18
SLC48A1-209ENST00000552003 RBM26Q5T8P6 1007 aaKnown RBP13.91□□□□□ -0.18
SLC48A1-209ENST00000552003 MORC1Q86VD1 984 aa13.91□□□□□ -0.18
SLC48A1-209ENST00000552003 CDCA5Q96FF9 252 aa13.91□□□□□ -0.18
SLC48A1-209ENST00000552003 NOM1Q5C9Z4 860 aaKnown RBP13.9□□□□□ -0.18
SLC48A1-209ENST00000552003 SUSD4Q5VX71 490 aa13.9□□□□□ -0.18
SLC48A1-209ENST00000552003 REM2Q8IYK8 340 aaPredicted RBP13.9□□□□□ -0.18
SLC48A1-209ENST00000552003 DPF2Q92785 391 aa13.9□□□□□ -0.18
SLC48A1-209ENST00000552003 RBM17Q96I25 401 aaKnown RBP13.9□□□□□ -0.18
SLC48A1-209ENST00000552003 PANK3Q9H999 370 aa13.9□□□□□ -0.18
SLC48A1-209ENST00000552003 KCNQ5Q9NR82 932 aa13.9□□□□□ -0.18
SLC48A1-209ENST00000552003 FOXD4L1Q9NU39 408 aa13.9□□□□□ -0.18
SLC48A1-209ENST00000552003 CEMIPQ8WUJ3 1361 aa13.9□□□□□ -0.18
SLC48A1-209ENST00000552003 TAF1P21675 1872 aa13.9□□□□□ -0.18
SLC48A1-209ENST00000552003 UNC80Q8N2C7 3258 aa13.89□□□□□ -0.19
SLC48A1-209ENST00000552003 PSMD14O00487 310 aa13.89□□□□□ -0.19
SLC48A1-209ENST00000552003 TM4SF4P48230 202 aa13.89□□□□□ -0.19
SLC48A1-209ENST00000552003 ABCC4O15439 1325 aa13.89□□□□□ -0.19
SLC48A1-209ENST00000552003 BTBD11A6QL63 1104 aa13.88□□□□□ -0.19
SLC48A1-209ENST00000552003 GNAT3A8MTJ3 354 aa13.88□□□□□ -0.19
SLC48A1-209ENST00000552003 H0YGN5 161 aa13.88□□□□□ -0.19
SLC48A1-209ENST00000552003 FKTNO75072 461 aa13.88□□□□□ -0.19
SLC48A1-209ENST00000552003 GPTP24298 496 aa13.88□□□□□ -0.19
SLC48A1-209ENST00000552003 CAP1Q01518 475 aa13.88□□□□□ -0.19
SLC48A1-209ENST00000552003 DCPSQ96C86 337 aaKnown RBP13.88□□□□□ -0.19
SLC48A1-209ENST00000552003 POLR3GLQ9BT43 218 aa13.88□□□□□ -0.19
SLC48A1-209ENST00000552003 RTL9Q8NET4 1388 aa13.87□□□□□ -0.19
SLC48A1-209ENST00000552003 NTSR2O95665 410 aa13.87□□□□□ -0.19
SLC48A1-209ENST00000552003 DPP8Q6V1X1 898 aaPredicted RBP13.87□□□□□ -0.19
SLC48A1-209ENST00000552003 NYXQ9GZU5 481 aa13.87□□□□□ -0.19
SLC48A1-209ENST00000552003 GGA3Q9NZ52 723 aa13.87□□□□□ -0.19
SLC48A1-209ENST00000552003 SCAF8Q9UPN6 1271 aaKnown RBP13.87□□□□□ -0.19
SLC48A1-209ENST00000552003 SCN9AQ15858 1988 aa13.87□□□□□ -0.19
SLC48A1-209ENST00000552003 UBE2Q2LH0YL09 131 aa13.86□□□□□ -0.19
SLC48A1-209ENST00000552003 SNRPA1P09661 255 aaKnown RBP13.86□□□□□ -0.19
SLC48A1-209ENST00000552003 TTLL7Q6ZT98 887 aa13.86□□□□□ -0.19
SLC48A1-209ENST00000552003 OTOP1Q7RTM1 612 aa13.86□□□□□ -0.19
SLC48A1-209ENST00000552003 MPNDQ8N594 471 aa13.86□□□□□ -0.19
SLC48A1-209ENST00000552003 SUPT20HQ8NEM7 779 aa13.86□□□□□ -0.19
SLC48A1-209ENST00000552003 CFHR5Q9BXR6 569 aa13.86□□□□□ -0.19
SLC48A1-209ENST00000552003 VCANP13611 3396 aa13.86□□□□□ -0.19
SLC48A1-209ENST00000552003 LAMB2P55268 1798 aa13.86□□□□□ -0.19
SLC48A1-209ENST00000552003 MKRN3Q13064 507 aaKnown RBP13.85□□□□□ -0.19
SLC48A1-209ENST00000552003 INTS3Q68E01 1043 aaKnown RBP13.85□□□□□ -0.19
SLC48A1-209ENST00000552003 CHRDL2Q6WN34 429 aa13.85□□□□□ -0.19
SLC48A1-209ENST00000552003 SP8Q8IXZ3 490 aa13.85□□□□□ -0.19
SLC48A1-209ENST00000552003 NGEFQ8N5V2 710 aa13.85□□□□□ -0.19
SLC48A1-209ENST00000552003 RBM27Q9P2N5 1060 aaKnown RBP13.85□□□□□ -0.19
SLC48A1-209ENST00000552003 TRIM17Q9Y577 477 aa13.85□□□□□ -0.19
SLC48A1-209ENST00000552003 IBTKQ9P2D0 1353 aaPredicted RBP13.84□□□□□ -0.19
SLC48A1-209ENST00000552003 KIF4BQ2VIQ3 1234 aa13.84□□□□□ -0.19
SLC48A1-209ENST00000552003 ZNF34Q8IZ26 560 aa13.84□□□□□ -0.19
SLC48A1-209ENST00000552003 DBNDD1Q9H9R9 158 aa13.84□□□□□ -0.19
SLC48A1-209ENST00000552003 COL4A1P02462 1669 aa13.83□□□□□ -0.2
SLC48A1-209ENST00000552003 PRAMEF18Q5VWM3 479 aa13.83□□□□□ -0.2
SLC48A1-209ENST00000552003 SULF1Q8IWU6 871 aa13.83□□□□□ -0.2
SLC48A1-209ENST00000552003 ARMC5Q96C12 935 aa13.83□□□□□ -0.2
SLC48A1-209ENST00000552003 MAP3K15Q6ZN16 1313 aa13.83□□□□□ -0.2
SLC48A1-209ENST00000552003 ERVV-1B6SEH8 477 aa13.82□□□□□ -0.2
SLC48A1-209ENST00000552003 ANGEL2Q5VTE6 544 aaKnown RBP13.82□□□□□ -0.2
SLC48A1-209ENST00000552003 PHACTR3Q96KR7 559 aa13.82□□□□□ -0.2
SLC48A1-209ENST00000552003 PTPN22Q9Y2R2 807 aa13.82□□□□□ -0.2
SLC48A1-209ENST00000552003 FKBP1BP68106 108 aa13.81□□□□□ -0.2
SLC48A1-209ENST00000552003 SLC10A5Q5PT55 438 aa13.81□□□□□ -0.2
SLC48A1-209ENST00000552003 PRO3102Q9H379 93 aa13.81□□□□□ -0.2
SLC48A1-209ENST00000552003 ZBTB3Q9H5J0 574 aa13.81□□□□□ -0.2
SLC48A1-209ENST00000552003 LRRC37AA6NMS7 1700 aa13.81□□□□□ -0.2
SLC48A1-209ENST00000552003 ANKRD36CQ5JPF3 1778 aa13.81□□□□□ -0.2
SLC48A1-209ENST00000552003 KDM3BQ7LBC6 1761 aa13.81□□□□□ -0.2
SLC48A1-209ENST00000552003 DIAPH1O60610 1272 aaKnown RBP13.8□□□□□ -0.2
SLC48A1-209ENST00000552003 BBOX1O75936 387 aa13.8□□□□□ -0.2
SLC48A1-209ENST00000552003 SCARF1Q14162 830 aa13.8□□□□□ -0.2
SLC48A1-209ENST00000552003 GAS2L2Q8NHY3 880 aa13.8□□□□□ -0.2
SLC48A1-209ENST00000552003 NLRP3Q96P20 1036 aa13.8□□□□□ -0.2
SLC48A1-209ENST00000552003 COL3A1P02461 1466 aaPredicted RBP13.8□□□□□ -0.2
SLC48A1-209ENST00000552003 SPTBN5Q9NRC6 3674 aaKnown RBP13.79□□□□□ -0.2
SLC48A1-209ENST00000552003 SOX1O00570 391 aaPredicted RBP13.79□□□□□ -0.2
SLC48A1-209ENST00000552003 RIMBP2O15034 1052 aa13.79□□□□□ -0.2
SLC48A1-209ENST00000552003 RPS12P25398 132 aaKnown RBP13.79□□□□□ -0.2
SLC48A1-209ENST00000552003 MNX1P50219 401 aaPredicted RBP13.79□□□□□ -0.2
SLC48A1-209ENST00000552003 DOK7Q18PE1 504 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms