RNA–Protein interactions for RNA: ENST00000551497.1

SMARCD1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 4

Gene SMARCD1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-211ENST00000551497 C7orf43Q8WVR3 580 aa19.16■□□□□ 0.66
SMARCD1-211ENST00000551497 TAF1P21675 1872 aa19.16■□□□□ 0.66
SMARCD1-211ENST00000551497 PLIN1O60240 522 aa19.15■□□□□ 0.66
SMARCD1-211ENST00000551497 GRIN3BO60391 1043 aa19.15■□□□□ 0.66
SMARCD1-211ENST00000551497 HSP90B1P14625 803 aaKnown RBP19.15■□□□□ 0.66
SMARCD1-211ENST00000551497 FOXO4P98177 505 aa19.15■□□□□ 0.66
SMARCD1-211ENST00000551497 EPHA10Q5JZY3 1008 aa19.15■□□□□ 0.66
SMARCD1-211ENST00000551497 INTS3Q68E01 1043 aaKnown RBP19.15■□□□□ 0.66
SMARCD1-211ENST00000551497 DDX46Q7L014 1031 aaKnown RBP19.15■□□□□ 0.66
SMARCD1-211ENST00000551497 SEC31BQ9NQW1 1179 aa19.15■□□□□ 0.66
SMARCD1-211ENST00000551497 ABCC4O15439 1325 aa19.15■□□□□ 0.66
SMARCD1-211ENST00000551497 CTSWP56202 376 aa19.14■□□□□ 0.65
SMARCD1-211ENST00000551497 KAZALD1Q96I82 304 aa19.14■□□□□ 0.65
SMARCD1-211ENST00000551497 PLA2G12BQ9BX93 195 aa19.14■□□□□ 0.65
SMARCD1-211ENST00000551497 UTYO14607 1347 aa19.14■□□□□ 0.65
SMARCD1-211ENST00000551497 RLBP1P12271 317 aa19.13■□□□□ 0.65
SMARCD1-211ENST00000551497 TMEM57Q8N5G2 664 aa19.13■□□□□ 0.65
SMARCD1-211ENST00000551497 CELF1Q92879 486 aaKnown RBP19.13■□□□□ 0.65
SMARCD1-211ENST00000551497 SUCLG2Q96I99 432 aa19.13■□□□□ 0.65
SMARCD1-211ENST00000551497 CACNA1SQ13698 1873 aa19.13■□□□□ 0.65
SMARCD1-211ENST00000551497 CSF1RP07333 972 aa19.12■□□□□ 0.65
SMARCD1-211ENST00000551497 CCDC152Q4G0S7 254 aa19.12■□□□□ 0.65
SMARCD1-211ENST00000551497 GREM2Q9H772 168 aa19.12■□□□□ 0.65
SMARCD1-211ENST00000551497 BBOX1O75936 387 aa19.11■□□□□ 0.65
SMARCD1-211ENST00000551497 GRAPQ13588 217 aa19.11■□□□□ 0.65
SMARCD1-211ENST00000551497 DZIP1LQ8IYY4 767 aaKnown RBP19.11■□□□□ 0.65
SMARCD1-211ENST00000551497 GRAPLQ8TC17 118 aaPredicted RBP19.11■□□□□ 0.65
SMARCD1-211ENST00000551497 PANK1Q8TE04 598 aa19.11■□□□□ 0.65
SMARCD1-211ENST00000551497 ARFGEF1Q9Y6D6 1849 aa19.11■□□□□ 0.65
SMARCD1-211ENST00000551497 PPEF1O14829 653 aaPredicted RBP19.1■□□□□ 0.65
SMARCD1-211ENST00000551497 RPS8P62241 208 aaKnown RBP19.1■□□□□ 0.65
SMARCD1-211ENST00000551497 LMBR1LQ6UX01 489 aa19.1■□□□□ 0.65
SMARCD1-211ENST00000551497 MEIS3Q99687 375 aa19.1■□□□□ 0.65
SMARCD1-211ENST00000551497 COL4A1P02462 1669 aa19.1■□□□□ 0.65
SMARCD1-211ENST00000551497 FAM161AQ3B820 660 aa19.09■□□□□ 0.65
SMARCD1-211ENST00000551497 RASSF7Q02833 373 aa19.08■□□□□ 0.64
SMARCD1-211ENST00000551497 FTSJ3Q8IY81 847 aaKnown RBP19.08■□□□□ 0.64
SMARCD1-211ENST00000551497 BICC1Q9H694 974 aaKnown RBP19.08■□□□□ 0.64
SMARCD1-211ENST00000551497 CHMP3Q9Y3E7 222 aa19.08■□□□□ 0.64
SMARCD1-211ENST00000551497 ATP6V0A2Q9Y487 856 aa19.08■□□□□ 0.64
SMARCD1-211ENST00000551497 NFKBIEO00221 500 aa19.07■□□□□ 0.64
SMARCD1-211ENST00000551497 ITGA6P23229 1130 aa19.07■□□□□ 0.64
SMARCD1-211ENST00000551497 PRELPP51888 382 aa19.07■□□□□ 0.64
SMARCD1-211ENST00000551497 SP8Q8IXZ3 490 aa19.07■□□□□ 0.64
SMARCD1-211ENST00000551497 ANKRD44Q8N8A2 993 aa19.07■□□□□ 0.64
SMARCD1-211ENST00000551497 MYH3P11055 1940 aa19.07■□□□□ 0.64
SMARCD1-211ENST00000551497 UBTFL1P0CB47 393 aaPredicted RBP19.06■□□□□ 0.64
SMARCD1-211ENST00000551497 CCDC93Q567U6 631 aa19.06■□□□□ 0.64
SMARCD1-211ENST00000551497 C20orf194Q5TEA3 1177 aa19.06■□□□□ 0.64
SMARCD1-211ENST00000551497 SOGA3Q5TF21 947 aa19.05■□□□□ 0.64
SMARCD1-211ENST00000551497 ANKRD18AQ8IVF6 992 aa19.05■□□□□ 0.64
SMARCD1-211ENST00000551497 ITPRIPQ8IWB1 547 aa19.05■□□□□ 0.64
SMARCD1-211ENST00000551497 LRRFIP2Q9Y608 721 aaKnown RBP19.05■□□□□ 0.64
SMARCD1-211ENST00000551497 GOLGB1Q14789 3259 aaKnown RBP19.05■□□□□ 0.64
SMARCD1-211ENST00000551497 RTL9Q8NET4 1388 aa19.05■□□□□ 0.64
SMARCD1-211ENST00000551497 ANKRD18BA2A2Z9 1011 aa19.04■□□□□ 0.64
SMARCD1-211ENST00000551497 IFIT5Q13325 482 aaKnown RBP19.04■□□□□ 0.64
SMARCD1-211ENST00000551497 RABL6Q3YEC7 729 aaPredicted RBP19.04■□□□□ 0.64
SMARCD1-211ENST00000551497 CC2D2BQ6DHV5 1058 aa19.04■□□□□ 0.64
SMARCD1-211ENST00000551497 RTKN2Q8IZC4 609 aa19.04■□□□□ 0.64
SMARCD1-211ENST00000551497 ZNF594Q96JF6 807 aaPredicted RBP19.04■□□□□ 0.64
SMARCD1-211ENST00000551497 CDC5LQ99459 802 aaKnown RBP19.04■□□□□ 0.64
SMARCD1-211ENST00000551497 ZBTB7BO15156 539 aaPredicted RBP19.03■□□□□ 0.64
SMARCD1-211ENST00000551497 GNAI3P08754 354 aa19.03■□□□□ 0.64
SMARCD1-211ENST00000551497 COG6Q9Y2V7 657 aa19.03■□□□□ 0.64
SMARCD1-211ENST00000551497 MS4A1P11836 297 aa19.02■□□□□ 0.64
SMARCD1-211ENST00000551497 GPSM2P81274 684 aa19.02■□□□□ 0.64
SMARCD1-211ENST00000551497 CCDC57Q2TAC2 916 aa19.02■□□□□ 0.64
SMARCD1-211ENST00000551497 C9orf131Q5VYM1 1079 aa19.02■□□□□ 0.64
SMARCD1-211ENST00000551497 TMC4Q7Z404 712 aa19.02■□□□□ 0.64
SMARCD1-211ENST00000551497 TMX4Q9H1E5 349 aaPredicted RBP19.02■□□□□ 0.64
SMARCD1-211ENST00000551497 TAOK3Q9H2K8 898 aa19.02■□□□□ 0.64
SMARCD1-211ENST00000551497 FER1L6Q2WGJ9 1857 aa19.02■□□□□ 0.64
SMARCD1-211ENST00000551497 SNED1Q8TER0 1413 aa19.01■□□□□ 0.63
SMARCD1-211ENST00000551497 FKBP4Q02790 459 aaKnown RBP eCLIP19.01■□□□□ 0.63
SMARCD1-211ENST00000551497 MPNDQ8N594 471 aa19.01■□□□□ 0.63
SMARCD1-211ENST00000551497 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.01■□□□□ 0.63
SMARCD1-211ENST00000551497 ZNF277Q9NRM2 450 aaPredicted RBP19.01■□□□□ 0.63
SMARCD1-211ENST00000551497 BSDC1Q9NW68 430 aaPredicted RBP19.01■□□□□ 0.63
SMARCD1-211ENST00000551497 NSFL1CQ9UNZ2 370 aaKnown RBP19.01■□□□□ 0.63
SMARCD1-211ENST00000551497 WTIPA6NIX2 430 aaPredicted RBP19■□□□□ 0.63
SMARCD1-211ENST00000551497 IGHMBP2P38935 993 aaKnown RBP19■□□□□ 0.63
SMARCD1-211ENST00000551497 PDE3AQ14432 1141 aa19■□□□□ 0.63
SMARCD1-211ENST00000551497 DPP8Q6V1X1 898 aaPredicted RBP19■□□□□ 0.63
SMARCD1-211ENST00000551497 ZNF784Q8NCA9 323 aaPredicted RBP19■□□□□ 0.63
SMARCD1-211ENST00000551497 MINPP1Q9UNW1 487 aa19■□□□□ 0.63
SMARCD1-211ENST00000551497 SBF1O95248 1867 aa19■□□□□ 0.63
SMARCD1-211ENST00000551497 CHD4Q14839 1912 aa19■□□□□ 0.63
SMARCD1-211ENST00000551497 LTBP3Q9NS15 1303 aa19■□□□□ 0.63
SMARCD1-211ENST00000551497 CCDC88AQ3V6T2 1871 aa18.99■□□□□ 0.63
SMARCD1-211ENST00000551497 GNAI2P04899 355 aa18.99■□□□□ 0.63
SMARCD1-211ENST00000551497 LMNB1P20700 586 aa18.99■□□□□ 0.63
SMARCD1-211ENST00000551497 MVPQ14764 893 aaKnown RBP18.99■□□□□ 0.63
SMARCD1-211ENST00000551497 GRIPAP1Q4V328 841 aa18.99■□□□□ 0.63
SMARCD1-211ENST00000551497 KLHDC4Q8TBB5 520 aa18.99■□□□□ 0.63
SMARCD1-211ENST00000551497 MPHOSPH8Q99549 860 aa18.99■□□□□ 0.63
SMARCD1-211ENST00000551497 PUS3Q9BZE2 481 aaKnown RBP18.99■□□□□ 0.63
SMARCD1-211ENST00000551497 C1orf115Q9H7X2 142 aa18.99■□□□□ 0.63
SMARCD1-211ENST00000551497 RNF181Q9P0P0 153 aa18.99■□□□□ 0.63
SMARCD1-211ENST00000551497 HDAC5Q9UQL6 1122 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms