RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 SF3B3Q15393 1217 aaKnown RBP12.88□□□□□ -0.35
NEK3-203ENST00000551355 ERFEQ4G0M1 354 aa12.88□□□□□ -0.35
NEK3-203ENST00000551355 PARP3Q9Y6F1 533 aa12.88□□□□□ -0.35
NEK3-203ENST00000551355 C4AP0C0L4 1744 aa12.88□□□□□ -0.35
NEK3-203ENST00000551355 ANKRD18BA2A2Z9 1011 aa12.87□□□□□ -0.35
NEK3-203ENST00000551355 POLRMTO00411 1230 aaKnown RBP12.87□□□□□ -0.35
NEK3-203ENST00000551355 HCLS1P14317 486 aaPredicted RBP12.87□□□□□ -0.35
NEK3-203ENST00000551355 OS9Q13438 667 aaPredicted RBP12.87□□□□□ -0.35
NEK3-203ENST00000551355 TAF7LQ5H9L4 462 aa12.87□□□□□ -0.35
NEK3-203ENST00000551355 ANKRD45Q5TZF3 282 aa12.87□□□□□ -0.35
NEK3-203ENST00000551355 CHD1LQ86WJ1 897 aa12.87□□□□□ -0.35
NEK3-203ENST00000551355 NUTM1Q86Y26 1132 aa12.87□□□□□ -0.35
NEK3-203ENST00000551355 KIF1BPQ96EK5 621 aa12.87□□□□□ -0.35
NEK3-203ENST00000551355 LRRCC1Q9C099 1032 aa12.87□□□□□ -0.35
NEK3-203ENST00000551355 QSER1Q2KHR3 1735 aa12.86□□□□□ -0.35
NEK3-203ENST00000551355 CIAO1O76071 339 aa12.86□□□□□ -0.35
NEK3-203ENST00000551355 RFX5P48382 616 aaPredicted RBP12.86□□□□□ -0.35
NEK3-203ENST00000551355 PTPN12Q05209 780 aaKnown RBP12.86□□□□□ -0.35
NEK3-203ENST00000551355 SYNE4Q8N205 404 aa12.86□□□□□ -0.35
NEK3-203ENST00000551355 MMP10P09238 476 aa12.85□□□□□ -0.35
NEK3-203ENST00000551355 ITGA6P23229 1130 aa12.85□□□□□ -0.35
NEK3-203ENST00000551355 IL15P40933 162 aaPredicted RBP12.85□□□□□ -0.35
NEK3-203ENST00000551355 DDR1Q08345 913 aa12.85□□□□□ -0.35
NEK3-203ENST00000551355 FAM161AQ3B820 660 aa12.85□□□□□ -0.35
NEK3-203ENST00000551355 PRR5LQ6MZQ0 368 aa12.85□□□□□ -0.35
NEK3-203ENST00000551355 CDC5LQ99459 802 aaKnown RBP12.85□□□□□ -0.35
NEK3-203ENST00000551355 GREM2Q9H772 168 aa12.85□□□□□ -0.35
NEK3-203ENST00000551355 PDZRN3Q9UPQ7 1066 aa12.85□□□□□ -0.35
NEK3-203ENST00000551355 EXOC6BQ9Y2D4 811 aa12.85□□□□□ -0.35
NEK3-203ENST00000551355 COL24A1Q17RW2 1714 aa12.85□□□□□ -0.35
NEK3-203ENST00000551355 RHPN1Q8TCX5 695 aa12.84□□□□□ -0.35
NEK3-203ENST00000551355 BRIP1Q9BX63 1249 aa12.84□□□□□ -0.35
NEK3-203ENST00000551355 KLRG2A4D1S0 409 aaPredicted RBP12.83□□□□□ -0.36
NEK3-203ENST00000551355 EYA2O00167 538 aa12.83□□□□□ -0.36
NEK3-203ENST00000551355 PDE6BP35913 854 aa12.83□□□□□ -0.36
NEK3-203ENST00000551355 IGHMBP2P38935 993 aaKnown RBP12.83□□□□□ -0.36
NEK3-203ENST00000551355 DDX46Q7L014 1031 aaKnown RBP12.83□□□□□ -0.36
NEK3-203ENST00000551355 CLASRPQ8N2M8 674 aaKnown RBP12.83□□□□□ -0.36
NEK3-203ENST00000551355 ABCC12Q96J65 1359 aa12.82□□□□□ -0.36
NEK3-203ENST00000551355 CRY2Q49AN0 593 aa12.82□□□□□ -0.36
NEK3-203ENST00000551355 LDHAL6AQ6ZMR3 332 aa12.82□□□□□ -0.36
NEK3-203ENST00000551355 MPHOSPH8Q99549 860 aa12.82□□□□□ -0.36
NEK3-203ENST00000551355 LNPKQ9C0E8 428 aa12.82□□□□□ -0.36
NEK3-203ENST00000551355 MTFR1LQ9H019 292 aa12.82□□□□□ -0.36
NEK3-203ENST00000551355 GPR108Q9NPR9 543 aa12.82□□□□□ -0.36
NEK3-203ENST00000551355 PA2G4Q9UQ80 394 aaKnown RBP12.82□□□□□ -0.36
NEK3-203ENST00000551355 MSL1Q68DK7 614 aa12.81□□□□□ -0.36
NEK3-203ENST00000551355 ANKRD18AQ8IVF6 992 aa12.81□□□□□ -0.36
NEK3-203ENST00000551355 RPGRQ92834 1020 aaKnown RBP12.81□□□□□ -0.36
NEK3-203ENST00000551355 RBM17Q96I25 401 aaKnown RBP12.81□□□□□ -0.36
NEK3-203ENST00000551355 SIL1Q9H173 461 aa12.81□□□□□ -0.36
NEK3-203ENST00000551355 CNNM1Q9NRU3 951 aa12.81□□□□□ -0.36
NEK3-203ENST00000551355 CEP126Q9P2H0 1117 aa12.81□□□□□ -0.36
NEK3-203ENST00000551355 AKAP2Q9Y2D5 859 aa12.81□□□□□ -0.36
NEK3-203ENST00000551355 MROH5Q6ZUA9 1318 aa12.81□□□□□ -0.36
NEK3-203ENST00000551355 APBB1O00213 710 aa12.8□□□□□ -0.36
NEK3-203ENST00000551355 POLD1P28340 1107 aa12.8□□□□□ -0.36
NEK3-203ENST00000551355 HOXA10P31260 410 aaPredicted RBP12.8□□□□□ -0.36
NEK3-203ENST00000551355 TMC4Q7Z404 712 aa12.8□□□□□ -0.36
NEK3-203ENST00000551355 KLHDC4Q8TBB5 520 aa12.8□□□□□ -0.36
NEK3-203ENST00000551355 GPATCH3Q96I76 525 aa12.8□□□□□ -0.36
NEK3-203ENST00000551355 CCDC85AQ96PX6 553 aaPredicted RBP12.8□□□□□ -0.36
NEK3-203ENST00000551355 BSDC1Q9NW68 430 aaPredicted RBP12.8□□□□□ -0.36
NEK3-203ENST00000551355 LAMB2P55268 1798 aa12.79□□□□□ -0.36
NEK3-203ENST00000551355 TUBGCP6Q96RT7 1819 aa12.79□□□□□ -0.36
NEK3-203ENST00000551355 NPM3O75607 178 aaKnown RBP12.79□□□□□ -0.36
NEK3-203ENST00000551355 BBOX1O75936 387 aa12.79□□□□□ -0.36
NEK3-203ENST00000551355 SASH1O94885 1247 aa12.79□□□□□ -0.36
NEK3-203ENST00000551355 IFIT2P09913 472 aaKnown RBP12.79□□□□□ -0.36
NEK3-203ENST00000551355 RPS8P62241 208 aaKnown RBP12.79□□□□□ -0.36
NEK3-203ENST00000551355 R3HDM1Q15032 1099 aaKnown RBP12.79□□□□□ -0.36
NEK3-203ENST00000551355 ILDR2Q71H61 639 aa12.79□□□□□ -0.36
NEK3-203ENST00000551355 ATG9AQ7Z3C6 839 aa12.79□□□□□ -0.36
NEK3-203ENST00000551355 ZNF594Q96JF6 807 aaPredicted RBP12.79□□□□□ -0.36
NEK3-203ENST00000551355 CRAMP1Q96RY5 1269 aa12.79□□□□□ -0.36
NEK3-203ENST00000551355 RIPOR2Q9Y4F9 1068 aa12.79□□□□□ -0.36
NEK3-203ENST00000551355 NPR1P16066 1061 aa12.78□□□□□ -0.36
NEK3-203ENST00000551355 ALDH1B1P30837 517 aa12.78□□□□□ -0.36
NEK3-203ENST00000551355 GRAPQ13588 217 aa12.78□□□□□ -0.36
NEK3-203ENST00000551355 METTL24Q5JXM2 366 aa12.78□□□□□ -0.36
NEK3-203ENST00000551355 C3orf67Q6ZVT6 689 aa12.78□□□□□ -0.36
NEK3-203ENST00000551355 GRAPLQ8TC17 118 aaPredicted RBP12.78□□□□□ -0.36
NEK3-203ENST00000551355 OSBPL3Q9H4L5 887 aa12.78□□□□□ -0.36
NEK3-203ENST00000551355 SEC31BQ9NQW1 1179 aa12.78□□□□□ -0.36
NEK3-203ENST00000551355 AOX1Q06278 1338 aa12.78□□□□□ -0.36
NEK3-203ENST00000551355 SMARCA5O60264 1052 aaPredicted RBP12.77□□□□□ -0.37
NEK3-203ENST00000551355 RGS3P49796 1198 aa12.77□□□□□ -0.37
NEK3-203ENST00000551355 TFCP2Q12800 502 aa12.77□□□□□ -0.37
NEK3-203ENST00000551355 LRRC24Q50LG9 513 aa12.77□□□□□ -0.37
NEK3-203ENST00000551355 MASTLQ96GX5 879 aa12.77□□□□□ -0.37
NEK3-203ENST00000551355 ANKRD2Q9GZV1 360 aa12.77□□□□□ -0.37
NEK3-203ENST00000551355 IL1RAPL2Q9NP60 686 aa12.77□□□□□ -0.37
NEK3-203ENST00000551355 STAP2Q9UGK3 403 aa12.77□□□□□ -0.37
NEK3-203ENST00000551355 DDX60Q8IY21 1712 aaKnown RBP12.76□□□□□ -0.37
NEK3-203ENST00000551355 NRXN2Q9P2S2 1712 aa12.76□□□□□ -0.37
NEK3-203ENST00000551355 H0YIN7 160 aa12.76□□□□□ -0.37
NEK3-203ENST00000551355 ERC2O15083 957 aa12.76□□□□□ -0.37
NEK3-203ENST00000551355 PDE8BO95263 885 aa12.76□□□□□ -0.37
NEK3-203ENST00000551355 SRGNP10124 158 aa12.76□□□□□ -0.37
NEK3-203ENST00000551355 MX1P20591 662 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms