RNA–Protein interactions for RNA: ENST00000550928.1

CR383656.13-201, humanhuman

TSL 3 BASIC

Gene CR383656.13, Length 563 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CR383656.13-201ENST00000550928 ZNF521Q96K83 1311 aa17.24■□□□□ 0.35
CR383656.13-201ENST00000550928 CCER2I3L3R5 266 aa17.24■□□□□ 0.35
CR383656.13-201ENST00000550928 HSP90B1P14625 803 aaKnown RBP17.24■□□□□ 0.35
CR383656.13-201ENST00000550928 FZD9O00144 591 aa17.23■□□□□ 0.35
CR383656.13-201ENST00000550928 IGKV5-2P06315 115 aa17.23■□□□□ 0.35
CR383656.13-201ENST00000550928 JDP2Q8WYK2 163 aa17.23■□□□□ 0.35
CR383656.13-201ENST00000550928 JARID2Q92833 1246 aaPredicted RBP17.23■□□□□ 0.35
CR383656.13-201ENST00000550928 VPS33BQ9H267 617 aa17.23■□□□□ 0.35
CR383656.13-201ENST00000550928 NEXNQ0ZGT2 675 aa17.22■□□□□ 0.35
CR383656.13-201ENST00000550928 FSTL1Q12841 308 aa17.22■□□□□ 0.35
CR383656.13-201ENST00000550928 FLIIQ13045 1269 aa17.22■□□□□ 0.35
CR383656.13-201ENST00000550928 TMC4Q7Z404 712 aa17.22■□□□□ 0.35
CR383656.13-201ENST00000550928 MPNDQ8N594 471 aa17.22■□□□□ 0.35
CR383656.13-201ENST00000550928 RTFDC1Q9BY42 306 aaPredicted RBP17.22■□□□□ 0.35
CR383656.13-201ENST00000550928 DDX60Q8IY21 1712 aaKnown RBP17.21■□□□□ 0.35
CR383656.13-201ENST00000550928 CACNA1FO60840 1977 aa17.21■□□□□ 0.35
CR383656.13-201ENST00000550928 TAF1P21675 1872 aa17.21■□□□□ 0.35
CR383656.13-201ENST00000550928 PDE8AO60658 829 aa17.21■□□□□ 0.35
CR383656.13-201ENST00000550928 SUPT20HQ8NEM7 779 aa17.21■□□□□ 0.35
CR383656.13-201ENST00000550928 CELF1Q92879 486 aaKnown RBP17.21■□□□□ 0.35
CR383656.13-201ENST00000550928 WDR90Q96KV7 1748 aa17.21■□□□□ 0.35
CR383656.13-201ENST00000550928 RPS8P62241 208 aaKnown RBP17.2■□□□□ 0.34
CR383656.13-201ENST00000550928 DPP8Q6V1X1 898 aaPredicted RBP17.2■□□□□ 0.34
CR383656.13-201ENST00000550928 LARGE2Q8N3Y3 721 aa17.2■□□□□ 0.34
CR383656.13-201ENST00000550928 ZNF541Q9H0D2 1346 aa17.2■□□□□ 0.34
CR383656.13-201ENST00000550928 NEURL1BA8MQ27 555 aa17.19■□□□□ 0.34
CR383656.13-201ENST00000550928 FKBP5Q13451 457 aaPredicted RBP17.19■□□□□ 0.34
CR383656.13-201ENST00000550928 CWF19L2Q2TBE0 894 aaKnown RBP17.19■□□□□ 0.34
CR383656.13-201ENST00000550928 SMC1BQ8NDV3 1235 aa17.19■□□□□ 0.34
CR383656.13-201ENST00000550928 DNAAF4Q8WXU2 420 aa17.19■□□□□ 0.34
CR383656.13-201ENST00000550928 L3MBTL3Q96JM7 780 aaPredicted RBP17.19■□□□□ 0.34
CR383656.13-201ENST00000550928 CDHR2Q9BYE9 1310 aa17.19■□□□□ 0.34
CR383656.13-201ENST00000550928 H7C1W4 665 aa17.18■□□□□ 0.34
CR383656.13-201ENST00000550928 PPIP5K2O43314 1243 aa17.18■□□□□ 0.34
CR383656.13-201ENST00000550928 EIF6P56537 245 aaKnown RBP17.18■□□□□ 0.34
CR383656.13-201ENST00000550928 SEC31BQ9NQW1 1179 aa17.18■□□□□ 0.34
CR383656.13-201ENST00000550928 APLP1P51693 650 aa17.17■□□□□ 0.34
CR383656.13-201ENST00000550928 AOC3Q16853 763 aa17.17■□□□□ 0.34
CR383656.13-201ENST00000550928 CCDC152Q4G0S7 254 aa17.17■□□□□ 0.34
CR383656.13-201ENST00000550928 GPC2Q8N158 579 aa17.17■□□□□ 0.34
CR383656.13-201ENST00000550928 IQCA1LA6NCM1 817 aa17.16■□□□□ 0.34
CR383656.13-201ENST00000550928 E9PSI1 815 aa17.16■□□□□ 0.34
CR383656.13-201ENST00000550928 SLFN5Q08AF3 891 aa17.16■□□□□ 0.34
CR383656.13-201ENST00000550928 GCKRQ14397 625 aa17.16■□□□□ 0.34
CR383656.13-201ENST00000550928 NIM1KQ8IY84 436 aa17.16■□□□□ 0.34
CR383656.13-201ENST00000550928 LINS1Q8NG48 757 aa17.16■□□□□ 0.34
CR383656.13-201ENST00000550928 NSFL1CQ9UNZ2 370 aaKnown RBP17.16■□□□□ 0.34
CR383656.13-201ENST00000550928 KIAA2012Q0VF49 1180 aa17.15■□□□□ 0.34
CR383656.13-201ENST00000550928 TTLL11Q8NHH1 800 aa17.15■□□□□ 0.34
CR383656.13-201ENST00000550928 TAF1DQ9H5J8 278 aaPredicted RBP17.15■□□□□ 0.34
CR383656.13-201ENST00000550928 HACL1Q9UJ83 578 aa17.15■□□□□ 0.34
CR383656.13-201ENST00000550928 ZNRF3Q9ULT6 936 aa17.15■□□□□ 0.34
CR383656.13-201ENST00000550928 COL4A5P29400 1685 aa17.15■□□□□ 0.34
CR383656.13-201ENST00000550928 GPSM2P81274 684 aa17.14■□□□□ 0.33
CR383656.13-201ENST00000550928 CCDC85AQ96PX6 553 aaPredicted RBP17.14■□□□□ 0.33
CR383656.13-201ENST00000550928 GJA3Q9Y6H8 435 aa17.14■□□□□ 0.33
CR383656.13-201ENST00000550928 SCN4AP35499 1836 aa17.13■□□□□ 0.33
CR383656.13-201ENST00000550928 F6X3S4 739 aa17.13■□□□□ 0.33
CR383656.13-201ENST00000550928 CASP7P55210 303 aa17.13■□□□□ 0.33
CR383656.13-201ENST00000550928 CTSWP56202 376 aa17.13■□□□□ 0.33
CR383656.13-201ENST00000550928 BEND3Q5T5X7 828 aa17.13■□□□□ 0.33
CR383656.13-201ENST00000550928 CHADLQ6NUI6 762 aa17.13■□□□□ 0.33
CR383656.13-201ENST00000550928 UBE3BQ7Z3V4 1068 aa17.13■□□□□ 0.33
CR383656.13-201ENST00000550928 POLLQ9UGP5 575 aa17.13■□□□□ 0.33
CR383656.13-201ENST00000550928 C6orf229H3BNL8 230 aa17.12■□□□□ 0.33
CR383656.13-201ENST00000550928 POTEIP0CG38 1075 aa17.12■□□□□ 0.33
CR383656.13-201ENST00000550928 POTEJP0CG39 1038 aa17.12■□□□□ 0.33
CR383656.13-201ENST00000550928 CXCL9Q07325 125 aa17.12■□□□□ 0.33
CR383656.13-201ENST00000550928 WASHC4Q2M389 1173 aa17.12■□□□□ 0.33
CR383656.13-201ENST00000550928 ANKRD18AQ8IVF6 992 aa17.12■□□□□ 0.33
CR383656.13-201ENST00000550928 TRMT2AQ8IZ69 625 aaKnown RBP17.12■□□□□ 0.33
CR383656.13-201ENST00000550928 CDCA7LQ96GN5 454 aa17.12■□□□□ 0.33
CR383656.13-201ENST00000550928 PLA2G12BQ9BX93 195 aa17.12■□□□□ 0.33
CR383656.13-201ENST00000550928 PODXL2Q9NZ53 605 aa17.12■□□□□ 0.33
CR383656.13-201ENST00000550928 COL4A1P02462 1669 aa17.12■□□□□ 0.33
CR383656.13-201ENST00000550928 EPHX2P34913 555 aa17.11■□□□□ 0.33
CR383656.13-201ENST00000550928 DIEXFQ68CQ4 756 aaKnown RBP17.11■□□□□ 0.33
CR383656.13-201ENST00000550928 PNMA8AQ86V59 439 aaPredicted RBP17.11■□□□□ 0.33
CR383656.13-201ENST00000550928 MRPL50Q8N5N7 158 aaKnown RBP17.11■□□□□ 0.33
CR383656.13-201ENST00000550928 DNAJC5GQ8N7S2 189 aa17.11■□□□□ 0.33
CR383656.13-201ENST00000550928 LRRC37AA6NMS7 1700 aa17.1■□□□□ 0.33
CR383656.13-201ENST00000550928 RIMBP2O15034 1052 aa17.1■□□□□ 0.33
CR383656.13-201ENST00000550928 CSF1RP07333 972 aa17.1■□□□□ 0.33
CR383656.13-201ENST00000550928 LDHDQ86WU2 507 aa17.1■□□□□ 0.33
CR383656.13-201ENST00000550928 MIER1Q8N108 512 aa17.1■□□□□ 0.33
CR383656.13-201ENST00000550928 TBC1D16Q8TBP0 767 aa17.1■□□□□ 0.33
CR383656.13-201ENST00000550928 CDC5LQ99459 802 aaKnown RBP17.1■□□□□ 0.33
CR383656.13-201ENST00000550928 EYA3Q99504 573 aa17.1■□□□□ 0.33
CR383656.13-201ENST00000550928 GREM2Q9H772 168 aa17.1■□□□□ 0.33
CR383656.13-201ENST00000550928 EPS15P42566 896 aa17.09■□□□□ 0.33
CR383656.13-201ENST00000550928 TNIP1Q15025 636 aa17.09■□□□□ 0.33
CR383656.13-201ENST00000550928 EAPPQ56P03 285 aaPredicted RBP17.09■□□□□ 0.33
CR383656.13-201ENST00000550928 CIAPIN1Q6FI81 312 aa17.09■□□□□ 0.33
CR383656.13-201ENST00000550928 ANKIB1Q9P2G1 1089 aa17.09■□□□□ 0.33
CR383656.13-201ENST00000550928 DUOX1Q9NRD9 1551 aa17.08■□□□□ 0.32
CR383656.13-201ENST00000550928 RTL9Q8NET4 1388 aa17.08■□□□□ 0.32
CR383656.13-201ENST00000550928 YDJCA8MPS7 323 aa17.08■□□□□ 0.32
CR383656.13-201ENST00000550928 LMOD1P29536 600 aaPredicted RBP17.08■□□□□ 0.32
CR383656.13-201ENST00000550928 SCNN1DP51172 638 aa17.08■□□□□ 0.32
CR383656.13-201ENST00000550928 CNKSR2Q8WXI2 1034 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms