RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 GNAI3P08754 354 aa16.98■□□□□ 0.31
ERBB3-215ENST00000550828 ST5P78524 1137 aa16.98■□□□□ 0.31
ERBB3-215ENST00000550828 PELP1Q8IZL8 1130 aaKnown RBP16.98■□□□□ 0.31
ERBB3-215ENST00000550828 KLRG2A4D1S0 409 aaPredicted RBP16.97■□□□□ 0.31
ERBB3-215ENST00000550828 GRIN3BO60391 1043 aa16.97■□□□□ 0.31
ERBB3-215ENST00000550828 PDE8AO60658 829 aa16.97■□□□□ 0.31
ERBB3-215ENST00000550828 GTF2E1P29083 439 aaPredicted RBP16.97■□□□□ 0.31
ERBB3-215ENST00000550828 CTSWP56202 376 aa16.97■□□□□ 0.31
ERBB3-215ENST00000550828 BRIP1Q9BX63 1249 aa16.97■□□□□ 0.31
ERBB3-215ENST00000550828 RABL6Q3YEC7 729 aaPredicted RBP16.96■□□□□ 0.31
ERBB3-215ENST00000550828 CRY2Q49AN0 593 aa16.96■□□□□ 0.31
ERBB3-215ENST00000550828 LRRC37AA6NMS7 1700 aa16.96■□□□□ 0.3
ERBB3-215ENST00000550828 NPHP1O15259 732 aa16.95■□□□□ 0.3
ERBB3-215ENST00000550828 GNAI2P04899 355 aa16.95■□□□□ 0.3
ERBB3-215ENST00000550828 CSF1RP07333 972 aa16.95■□□□□ 0.3
ERBB3-215ENST00000550828 SF3B3Q15393 1217 aaKnown RBP16.95■□□□□ 0.3
ERBB3-215ENST00000550828 TTLL11Q8NHH1 800 aa16.95■□□□□ 0.3
ERBB3-215ENST00000550828 CCDC85AQ96PX6 553 aaPredicted RBP16.95■□□□□ 0.3
ERBB3-215ENST00000550828 UTRNP46939 3433 aa16.95■□□□□ 0.3
ERBB3-215ENST00000550828 CHRNA5P30532 468 aa16.94■□□□□ 0.3
ERBB3-215ENST00000550828 FAM161AQ3B820 660 aa16.94■□□□□ 0.3
ERBB3-215ENST00000550828 LMBR1LQ6UX01 489 aa16.94■□□□□ 0.3
ERBB3-215ENST00000550828 SLC51AQ86UW1 340 aa16.94■□□□□ 0.3
ERBB3-215ENST00000550828 SIRT2Q8IXJ6 389 aa16.94■□□□□ 0.3
ERBB3-215ENST00000550828 GREM2Q9H772 168 aa16.94■□□□□ 0.3
ERBB3-215ENST00000550828 PCDHB15Q9Y5E8 787 aa16.94■□□□□ 0.3
ERBB3-215ENST00000550828 RTL9Q8NET4 1388 aa16.93■□□□□ 0.3
ERBB3-215ENST00000550828 KCNA3P22001 575 aa16.93■□□□□ 0.3
ERBB3-215ENST00000550828 CEP85Q6P2H3 762 aa16.93■□□□□ 0.3
ERBB3-215ENST00000550828 ARFGEF1Q9Y6D6 1849 aa16.92■□□□□ 0.3
ERBB3-215ENST00000550828 PNMA6EA0A0J9YXQ4 647 aa16.92■□□□□ 0.3
ERBB3-215ENST00000550828 SRGNP10124 158 aa16.92■□□□□ 0.3
ERBB3-215ENST00000550828 MTX1Q13505 466 aa16.92■□□□□ 0.3
ERBB3-215ENST00000550828 NLGN2Q8NFZ4 835 aa16.92■□□□□ 0.3
ERBB3-215ENST00000550828 NLRP3Q96P20 1036 aa16.92■□□□□ 0.3
ERBB3-215ENST00000550828 SEC31BQ9NQW1 1179 aa16.92■□□□□ 0.3
ERBB3-215ENST00000550828 LTBP1Q14766 1721 aa16.91■□□□□ 0.3
ERBB3-215ENST00000550828 DPEP1P16444 411 aa16.91■□□□□ 0.3
ERBB3-215ENST00000550828 RFX5P48382 616 aaPredicted RBP16.91■□□□□ 0.3
ERBB3-215ENST00000550828 C2CD5Q86YS7 1000 aa16.91■□□□□ 0.3
ERBB3-215ENST00000550828 CD2APQ9Y5K6 639 aa16.91■□□□□ 0.3
ERBB3-215ENST00000550828 A0A0G2JLW4 131 aa16.9■□□□□ 0.3
ERBB3-215ENST00000550828 HOXA10P31260 410 aaPredicted RBP16.9■□□□□ 0.3
ERBB3-215ENST00000550828 PDE6BP35913 854 aa16.9■□□□□ 0.3
ERBB3-215ENST00000550828 POLA2Q14181 598 aa16.89■□□□□ 0.29
ERBB3-215ENST00000550828 CCDC152Q4G0S7 254 aa16.89■□□□□ 0.29
ERBB3-215ENST00000550828 HSP90B1P14625 803 aaKnown RBP16.88■□□□□ 0.29
ERBB3-215ENST00000550828 YBX3P16989 372 aaKnown RBP eCLIP16.88■□□□□ 0.29
ERBB3-215ENST00000550828 ITGA6P23229 1130 aa16.88■□□□□ 0.29
ERBB3-215ENST00000550828 ATP8B2P98198 1209 aa16.88■□□□□ 0.29
ERBB3-215ENST00000550828 KLHDC4Q8TBB5 520 aa16.88■□□□□ 0.29
ERBB3-215ENST00000550828 CELF1Q92879 486 aaKnown RBP16.88■□□□□ 0.29
ERBB3-215ENST00000550828 ZNF594Q96JF6 807 aaPredicted RBP16.88■□□□□ 0.29
ERBB3-215ENST00000550828 CHMP3Q9Y3E7 222 aa16.88■□□□□ 0.29
ERBB3-215ENST00000550828 GOLGB1Q14789 3259 aaKnown RBP16.88■□□□□ 0.29
ERBB3-215ENST00000550828 H0YIN7 160 aa16.87■□□□□ 0.29
ERBB3-215ENST00000550828 SRGAP3O43295 1099 aa16.87■□□□□ 0.29
ERBB3-215ENST00000550828 NPR1P16066 1061 aa16.87■□□□□ 0.29
ERBB3-215ENST00000550828 TGFB2P61812 414 aa16.87■□□□□ 0.29
ERBB3-215ENST00000550828 STYK1Q6J9G0 422 aa16.87■□□□□ 0.29
ERBB3-215ENST00000550828 SSH3Q8TE77 659 aa16.87■□□□□ 0.29
ERBB3-215ENST00000550828 RPGRQ92834 1020 aaKnown RBP16.87■□□□□ 0.29
ERBB3-215ENST00000550828 MASTLQ96GX5 879 aa16.87■□□□□ 0.29
ERBB3-215ENST00000550828 CHMP4BQ9H444 224 aaKnown RBP16.87■□□□□ 0.29
ERBB3-215ENST00000550828 GPBP1L1Q9HC44 474 aaPredicted RBP16.87■□□□□ 0.29
ERBB3-215ENST00000550828 PA2G4Q9UQ80 394 aaKnown RBP16.87■□□□□ 0.29
ERBB3-215ENST00000550828 FER1L6Q2WGJ9 1857 aa16.86■□□□□ 0.29
ERBB3-215ENST00000550828 PTPN12Q05209 780 aaKnown RBP16.86■□□□□ 0.29
ERBB3-215ENST00000550828 CRAMP1Q96RY5 1269 aa16.86■□□□□ 0.29
ERBB3-215ENST00000550828 HDAC5Q9UQL6 1122 aa16.86■□□□□ 0.29
ERBB3-215ENST00000550828 NEFLP07196 543 aa16.85■□□□□ 0.29
ERBB3-215ENST00000550828 HSPA6P17066 643 aa16.85■□□□□ 0.29
ERBB3-215ENST00000550828 IFIT5Q13325 482 aaKnown RBP16.85■□□□□ 0.29
ERBB3-215ENST00000550828 GRAPQ13588 217 aa16.85■□□□□ 0.29
ERBB3-215ENST00000550828 GRAPLQ8TC17 118 aaPredicted RBP16.85■□□□□ 0.29
ERBB3-215ENST00000550828 ZNF622Q969S3 477 aaKnown RBP eCLIP16.85■□□□□ 0.29
ERBB3-215ENST00000550828 PUS3Q9BZE2 481 aaKnown RBP16.85■□□□□ 0.29
ERBB3-215ENST00000550828 WWC3Q9ULE0 1092 aa16.85■□□□□ 0.29
ERBB3-215ENST00000550828 SNED1Q8TER0 1413 aa16.85■□□□□ 0.29
ERBB3-215ENST00000550828 DUOX1Q9NRD9 1551 aa16.85■□□□□ 0.29
ERBB3-215ENST00000550828 ANKRD18BA2A2Z9 1011 aa16.84■□□□□ 0.29
ERBB3-215ENST00000550828 AAMPQ13685 434 aa16.84■□□□□ 0.29
ERBB3-215ENST00000550828 OLFM4Q6UX06 510 aa16.84■□□□□ 0.29
ERBB3-215ENST00000550828 DDX46Q7L014 1031 aaKnown RBP16.84■□□□□ 0.29
ERBB3-215ENST00000550828 RPAP2Q8IXW5 612 aaPredicted RBP16.84■□□□□ 0.29
ERBB3-215ENST00000550828 RBM17Q96I25 401 aaKnown RBP16.84■□□□□ 0.29
ERBB3-215ENST00000550828 PDZRN3Q9UPQ7 1066 aa16.84■□□□□ 0.29
ERBB3-215ENST00000550828 CCDC88AQ3V6T2 1871 aa16.84■□□□□ 0.29
ERBB3-215ENST00000550828 CCDC57Q2TAC2 916 aa16.83■□□□□ 0.28
ERBB3-215ENST00000550828 LRRC24Q50LG9 513 aa16.83■□□□□ 0.28
ERBB3-215ENST00000550828 PRPF40BQ6NWY9 871 aaKnown RBP16.83■□□□□ 0.28
ERBB3-215ENST00000550828 COPRSQ9NQ92 184 aa16.83■□□□□ 0.28
ERBB3-215ENST00000550828 ARAP2Q8WZ64 1704 aa16.82■□□□□ 0.28
ERBB3-215ENST00000550828 IGHDP01880 384 aa16.82■□□□□ 0.28
ERBB3-215ENST00000550828 RPS8P62241 208 aaKnown RBP16.82■□□□□ 0.28
ERBB3-215ENST00000550828 ATG9AQ7Z3C6 839 aa16.82■□□□□ 0.28
ERBB3-215ENST00000550828 C7orf43Q8WVR3 580 aa16.82■□□□□ 0.28
ERBB3-215ENST00000550828 CDC5LQ99459 802 aaKnown RBP16.82■□□□□ 0.28
ERBB3-215ENST00000550828 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.82■□□□□ 0.28
ERBB3-215ENST00000550828 ANKRD18AQ8IVF6 992 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 244.9 ms