RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 HMMRO75330 724 aa12.82□□□□□ -0.36
RAB5C-207ENST00000550504 MTX1Q13505 466 aa12.82□□□□□ -0.36
RAB5C-207ENST00000550504 FAM161AQ3B820 660 aa12.82□□□□□ -0.36
RAB5C-207ENST00000550504 NLRP3Q96P20 1036 aa12.82□□□□□ -0.36
RAB5C-207ENST00000550504 TNRC6CQ9HCJ0 1690 aaKnown RBP12.82□□□□□ -0.36
RAB5C-207ENST00000550504 NRXN2Q9P2S2 1712 aa12.82□□□□□ -0.36
RAB5C-207ENST00000550504 MYH3P11055 1940 aa12.82□□□□□ -0.36
RAB5C-207ENST00000550504 CSF1RP07333 972 aa12.81□□□□□ -0.36
RAB5C-207ENST00000550504 POLD1P28340 1107 aa12.81□□□□□ -0.36
RAB5C-207ENST00000550504 HDAC1Q13547 482 aaPredicted RBP12.81□□□□□ -0.36
RAB5C-207ENST00000550504 POLA2Q14181 598 aa12.81□□□□□ -0.36
RAB5C-207ENST00000550504 SSH3Q8TE77 659 aa12.81□□□□□ -0.36
RAB5C-207ENST00000550504 GREM2Q9H772 168 aa12.81□□□□□ -0.36
RAB5C-207ENST00000550504 IFIT5Q13325 482 aaKnown RBP12.8□□□□□ -0.36
RAB5C-207ENST00000550504 CCDC57Q2TAC2 916 aa12.8□□□□□ -0.36
RAB5C-207ENST00000550504 CCDC152Q4G0S7 254 aa12.8□□□□□ -0.36
RAB5C-207ENST00000550504 KLHDC4Q8TBB5 520 aa12.8□□□□□ -0.36
RAB5C-207ENST00000550504 PA2G4Q9UQ80 394 aaKnown RBP12.8□□□□□ -0.36
RAB5C-207ENST00000550504 ANKRD18BA2A2Z9 1011 aa12.79□□□□□ -0.36
RAB5C-207ENST00000550504 APBB1O00213 710 aa12.79□□□□□ -0.36
RAB5C-207ENST00000550504 ITGA6P23229 1130 aa12.79□□□□□ -0.36
RAB5C-207ENST00000550504 RFX5P48382 616 aaPredicted RBP12.79□□□□□ -0.36
RAB5C-207ENST00000550504 SF3B3Q15393 1217 aaKnown RBP12.79□□□□□ -0.36
RAB5C-207ENST00000550504 TAF7LQ5H9L4 462 aa12.79□□□□□ -0.36
RAB5C-207ENST00000550504 ZNF594Q96JF6 807 aaPredicted RBP12.79□□□□□ -0.36
RAB5C-207ENST00000550504 BRIP1Q9BX63 1249 aa12.79□□□□□ -0.36
RAB5C-207ENST00000550504 SEC31BQ9NQW1 1179 aa12.79□□□□□ -0.36
RAB5C-207ENST00000550504 EXOC6BQ9Y2D4 811 aa12.79□□□□□ -0.36
RAB5C-207ENST00000550504 RIC1Q4ADV7 1423 aa12.79□□□□□ -0.36
RAB5C-207ENST00000550504 ANKRD31Q8N7Z5 1873 aa12.78□□□□□ -0.36
RAB5C-207ENST00000550504 SURF6O75683 361 aaKnown RBP12.78□□□□□ -0.36
RAB5C-207ENST00000550504 SIL1Q9H173 461 aa12.78□□□□□ -0.36
RAB5C-207ENST00000550504 PDE6BP35913 854 aa12.77□□□□□ -0.37
RAB5C-207ENST00000550504 PTPN12Q05209 780 aaKnown RBP12.77□□□□□ -0.37
RAB5C-207ENST00000550504 OS9Q13438 667 aaPredicted RBP12.77□□□□□ -0.37
RAB5C-207ENST00000550504 CENPQQ7L2Z9 268 aaPredicted RBP12.77□□□□□ -0.37
RAB5C-207ENST00000550504 RPGRQ92834 1020 aaKnown RBP12.77□□□□□ -0.37
RAB5C-207ENST00000550504 BCL11AQ9H165 835 aa12.77□□□□□ -0.37
RAB5C-207ENST00000550504 DCTPP1Q9H773 170 aa12.77□□□□□ -0.37
RAB5C-207ENST00000550504 KDM2BQ8NHM5 1336 aa12.77□□□□□ -0.37
RAB5C-207ENST00000550504 PTGER2P43116 358 aa12.76□□□□□ -0.37
RAB5C-207ENST00000550504 G3BP1Q13283 466 aaKnown RBP eCLIP12.76□□□□□ -0.373e-6■■□□□ 13.8
RAB5C-207ENST00000550504 CRY2Q49AN0 593 aa12.76□□□□□ -0.37
RAB5C-207ENST00000550504 DDX46Q7L014 1031 aaKnown RBP12.76□□□□□ -0.37
RAB5C-207ENST00000550504 C2CD5Q86YS7 1000 aa12.76□□□□□ -0.37
RAB5C-207ENST00000550504 KLHL34Q8N239 644 aa12.76□□□□□ -0.37
RAB5C-207ENST00000550504 SGIP1Q9BQI5 828 aa12.76□□□□□ -0.37
RAB5C-207ENST00000550504 PUS3Q9BZE2 481 aaKnown RBP12.76□□□□□ -0.37
RAB5C-207ENST00000550504 SPON1Q9HCB6 807 aa12.76□□□□□ -0.37
RAB5C-207ENST00000550504 COPRSQ9NQ92 184 aa12.76□□□□□ -0.37
RAB5C-207ENST00000550504 PPP1R1BQ9UD71 204 aaPredicted RBP12.76□□□□□ -0.37
RAB5C-207ENST00000550504 RTL9Q8NET4 1388 aa12.76□□□□□ -0.37
RAB5C-207ENST00000550504 C10orf71Q711Q0 1435 aa12.76□□□□□ -0.37
RAB5C-207ENST00000550504 COL4A1P02462 1669 aa12.76□□□□□ -0.37
RAB5C-207ENST00000550504 TAF1P21675 1872 aa12.76□□□□□ -0.37
RAB5C-207ENST00000550504 KLRG2A4D1S0 409 aaPredicted RBP12.75□□□□□ -0.37
RAB5C-207ENST00000550504 CHRNA5P30532 468 aa12.75□□□□□ -0.37
RAB5C-207ENST00000550504 IGHMBP2P38935 993 aaKnown RBP12.75□□□□□ -0.37
RAB5C-207ENST00000550504 SMC5Q8IY18 1101 aa12.75□□□□□ -0.37
RAB5C-207ENST00000550504 CELF1Q92879 486 aaKnown RBP12.75□□□□□ -0.37
RAB5C-207ENST00000550504 GCC1Q96CN9 775 aa12.75□□□□□ -0.37
RAB5C-207ENST00000550504 RBM17Q96I25 401 aaKnown RBP12.75□□□□□ -0.37
RAB5C-207ENST00000550504 CDC5LQ99459 802 aaKnown RBP12.75□□□□□ -0.37
RAB5C-207ENST00000550504 NOP58Q9Y2X3 529 aaKnown RBP12.75□□□□□ -0.37
RAB5C-207ENST00000550504 SPEF2Q9C093 1822 aa12.74□□□□□ -0.37
RAB5C-207ENST00000550504 COL11A2P13942 1736 aaPredicted RBP12.74□□□□□ -0.37
RAB5C-207ENST00000550504 SRGNP10124 158 aa12.74□□□□□ -0.37
RAB5C-207ENST00000550504 NPR1P16066 1061 aa12.74□□□□□ -0.37
RAB5C-207ENST00000550504 LRRC24Q50LG9 513 aa12.74□□□□□ -0.37
RAB5C-207ENST00000550504 ANKRD45Q5TZF3 282 aa12.74□□□□□ -0.37
RAB5C-207ENST00000550504 LDHAL6AQ6ZMR3 332 aa12.74□□□□□ -0.37
RAB5C-207ENST00000550504 ANKRD18AQ8IVF6 992 aa12.74□□□□□ -0.37
RAB5C-207ENST00000550504 ZNF622Q969S3 477 aaKnown RBP eCLIP12.74□□□□□ -0.37
RAB5C-207ENST00000550504 MPHOSPH8Q99549 860 aa12.74□□□□□ -0.37
RAB5C-207ENST00000550504 CNNM1Q9NRU3 951 aa12.74□□□□□ -0.37
RAB5C-207ENST00000550504 H0YIN7 160 aa12.73□□□□□ -0.37
RAB5C-207ENST00000550504 EYA2O00167 538 aa12.73□□□□□ -0.37
RAB5C-207ENST00000550504 SMARCA5O60264 1052 aaPredicted RBP12.73□□□□□ -0.37
RAB5C-207ENST00000550504 RAB11FIP3O75154 756 aa12.73□□□□□ -0.37
RAB5C-207ENST00000550504 YY1P25490 414 aa12.73□□□□□ -0.37
RAB5C-207ENST00000550504 HOXA10P31260 410 aaPredicted RBP12.73□□□□□ -0.37
RAB5C-207ENST00000550504 RPS8P62241 208 aaKnown RBP12.73□□□□□ -0.37
RAB5C-207ENST00000550504 GRAPQ13588 217 aa12.73□□□□□ -0.37
RAB5C-207ENST00000550504 HSP90AB4PQ58FF6 505 aa12.73□□□□□ -0.37
RAB5C-207ENST00000550504 ATG9AQ7Z3C6 839 aa12.73□□□□□ -0.37
RAB5C-207ENST00000550504 GRAPLQ8TC17 118 aaPredicted RBP12.73□□□□□ -0.37
RAB5C-207ENST00000550504 A0A0G2JLW4 131 aa12.72□□□□□ -0.37
RAB5C-207ENST00000550504 CIAO1O76071 339 aa12.72□□□□□ -0.37
RAB5C-207ENST00000550504 ERC1Q8IUD2 1116 aa12.72□□□□□ -0.37
RAB5C-207ENST00000550504 RHPN1Q8TCX5 695 aa12.72□□□□□ -0.37
RAB5C-207ENST00000550504 MASTLQ96GX5 879 aa12.72□□□□□ -0.37
RAB5C-207ENST00000550504 CRAMP1Q96RY5 1269 aa12.72□□□□□ -0.37
RAB5C-207ENST00000550504 LRRCC1Q9C099 1032 aa12.72□□□□□ -0.37
RAB5C-207ENST00000550504 ZBTB47Q9UFB7 747 aaPredicted RBP12.72□□□□□ -0.37
RAB5C-207ENST00000550504 PDZRN3Q9UPQ7 1066 aa12.72□□□□□ -0.37
RAB5C-207ENST00000550504 SASH1O94885 1247 aa12.71□□□□□ -0.37
RAB5C-207ENST00000550504 DPEP1P16444 411 aa12.71□□□□□ -0.37
RAB5C-207ENST00000550504 IL15P40933 162 aaPredicted RBP12.71□□□□□ -0.37
RAB5C-207ENST00000550504 NUCB1Q02818 461 aa12.71□□□□□ -0.37
RAB5C-207ENST00000550504 TFCP2Q12800 502 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms