RNA–Protein interactions for RNA: ENST00000550346.5

TROAP-212, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3

Gene TROAP, Length 640 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-212ENST00000550346 CHMP3Q9Y3E7 222 aa16.36■□□□□ 0.21
TROAP-212ENST00000550346 ZBTB7BO15156 539 aaPredicted RBP16.35■□□□□ 0.21
TROAP-212ENST00000550346 GPR162Q16538 588 aa16.35■□□□□ 0.21
TROAP-212ENST00000550346 CRAMP1Q96RY5 1269 aa16.35■□□□□ 0.21
TROAP-212ENST00000550346 PLA2G12BQ9BX93 195 aa16.35■□□□□ 0.21
TROAP-212ENST00000550346 DDX19BQ9UMR2 479 aa16.35■□□□□ 0.21
TROAP-212ENST00000550346 UTYO14607 1347 aa16.35■□□□□ 0.21
TROAP-212ENST00000550346 ABCC12Q96J65 1359 aa16.35■□□□□ 0.21
TROAP-212ENST00000550346 BBOX1O75936 387 aa16.34■□□□□ 0.21
TROAP-212ENST00000550346 GNAI2P04899 355 aa16.34■□□□□ 0.21
TROAP-212ENST00000550346 HOXA10P31260 410 aaPredicted RBP16.34■□□□□ 0.21
TROAP-212ENST00000550346 CASP7P55210 303 aa16.34■□□□□ 0.21
TROAP-212ENST00000550346 CTSWP56202 376 aa16.34■□□□□ 0.21
TROAP-212ENST00000550346 CRY2Q49AN0 593 aa16.34■□□□□ 0.21
TROAP-212ENST00000550346 TTLL11Q8NHH1 800 aa16.34■□□□□ 0.21
TROAP-212ENST00000550346 BCS1LQ9Y276 419 aa16.34■□□□□ 0.21
TROAP-212ENST00000550346 RIC1Q4ADV7 1423 aa16.34■□□□□ 0.21
TROAP-212ENST00000550346 KCNA3P22001 575 aa16.33■□□□□ 0.2
TROAP-212ENST00000550346 CCDC57Q2TAC2 916 aa16.33■□□□□ 0.2
TROAP-212ENST00000550346 LMBR1LQ6UX01 489 aa16.33■□□□□ 0.2
TROAP-212ENST00000550346 C3orf67Q6ZVT6 689 aa16.33■□□□□ 0.2
TROAP-212ENST00000550346 CCDC85AQ96PX6 553 aaPredicted RBP16.33■□□□□ 0.2
TROAP-212ENST00000550346 MEIS3Q99687 375 aa16.33■□□□□ 0.2
TROAP-212ENST00000550346 KIF13BQ9NQT8 1826 aa16.33■□□□□ 0.2
TROAP-212ENST00000550346 CSF1RP07333 972 aa16.32■□□□□ 0.2
TROAP-212ENST00000550346 RPS8P62241 208 aaKnown RBP16.32■□□□□ 0.2
TROAP-212ENST00000550346 IFIT5Q13325 482 aaKnown RBP16.32■□□□□ 0.2
TROAP-212ENST00000550346 TAF7LQ5H9L4 462 aa16.32■□□□□ 0.2
TROAP-212ENST00000550346 SUCLG2Q96I99 432 aa16.32■□□□□ 0.2
TROAP-212ENST00000550346 CDC5LQ99459 802 aaKnown RBP16.32■□□□□ 0.2
TROAP-212ENST00000550346 WWC3Q9ULE0 1092 aa16.32■□□□□ 0.2
TROAP-212ENST00000550346 DDX60Q8IY21 1712 aaKnown RBP16.31■□□□□ 0.2
TROAP-212ENST00000550346 ANKRD18BA2A2Z9 1011 aa16.31■□□□□ 0.2
TROAP-212ENST00000550346 FOXO4P98177 505 aa16.31■□□□□ 0.2
TROAP-212ENST00000550346 TMC4Q7Z404 712 aa16.31■□□□□ 0.2
TROAP-212ENST00000550346 ANKRD18AQ8IVF6 992 aa16.31■□□□□ 0.2
TROAP-212ENST00000550346 ZBTB40Q9NUA8 1239 aa16.31■□□□□ 0.2
TROAP-212ENST00000550346 ZNF219Q9P2Y4 722 aaPredicted RBP16.31■□□□□ 0.2
TROAP-212ENST00000550346 LRRFIP2Q9Y608 721 aaKnown RBP16.31■□□□□ 0.2
TROAP-212ENST00000550346 ANKRD31Q8N7Z5 1873 aa16.31■□□□□ 0.2
TROAP-212ENST00000550346 LAMB2P55268 1798 aa16.31■□□□□ 0.2
TROAP-212ENST00000550346 GRIN3BO60391 1043 aa16.3■□□□□ 0.2
TROAP-212ENST00000550346 IGHMBP2P38935 993 aaKnown RBP16.3■□□□□ 0.2
TROAP-212ENST00000550346 GRAPQ13588 217 aa16.3■□□□□ 0.2
TROAP-212ENST00000550346 SOGA3Q5TF21 947 aa16.3■□□□□ 0.2
TROAP-212ENST00000550346 GRAPLQ8TC17 118 aaPredicted RBP16.3■□□□□ 0.2
TROAP-212ENST00000550346 BICC1Q9H694 974 aaKnown RBP16.3■□□□□ 0.2
TROAP-212ENST00000550346 ITGA6P23229 1130 aa16.29■□□□□ 0.2
TROAP-212ENST00000550346 EPHA10Q5JZY3 1008 aa16.29■□□□□ 0.2
TROAP-212ENST00000550346 PRPF40BQ6NWY9 871 aaKnown RBP16.29■□□□□ 0.2
TROAP-212ENST00000550346 MPHOSPH8Q99549 860 aa16.29■□□□□ 0.2
TROAP-212ENST00000550346 GREM2Q9H772 168 aa16.29■□□□□ 0.2
TROAP-212ENST00000550346 C1orf115Q9H7X2 142 aa16.29■□□□□ 0.2
TROAP-212ENST00000550346 C21orf2O43822 256 aa16.28■□□□□ 0.2
TROAP-212ENST00000550346 GRIPAP1Q4V328 841 aa16.28■□□□□ 0.2
TROAP-212ENST00000550346 CC2D2BQ6DHV5 1058 aa16.28■□□□□ 0.2
TROAP-212ENST00000550346 ARHGAP27Q6ZUM4 889 aa16.28■□□□□ 0.2
TROAP-212ENST00000550346 SEC31BQ9NQW1 1179 aa16.28■□□□□ 0.2
TROAP-212ENST00000550346 GTF3C3Q9Y5Q9 886 aa16.28■□□□□ 0.2
TROAP-212ENST00000550346 TAF1P21675 1872 aa16.28■□□□□ 0.2
TROAP-212ENST00000550346 PPEF1O14829 653 aaPredicted RBP16.27■□□□□ 0.2
TROAP-212ENST00000550346 SP8Q8IXZ3 490 aa16.27■□□□□ 0.2
TROAP-212ENST00000550346 AAMPQ13685 434 aa16.26■□□□□ 0.19
TROAP-212ENST00000550346 FAM161AQ3B820 660 aa16.26■□□□□ 0.19
TROAP-212ENST00000550346 RABL6Q3YEC7 729 aaPredicted RBP16.26■□□□□ 0.19
TROAP-212ENST00000550346 ERICH6BQ5W0A0 696 aa16.26■□□□□ 0.19
TROAP-212ENST00000550346 RTKN2Q8IZC4 609 aa16.26■□□□□ 0.19
TROAP-212ENST00000550346 ANKRD44Q8N8A2 993 aa16.26■□□□□ 0.19
TROAP-212ENST00000550346 KAZALD1Q96I82 304 aa16.26■□□□□ 0.19
TROAP-212ENST00000550346 RTL9Q8NET4 1388 aa16.26■□□□□ 0.19
TROAP-212ENST00000550346 SRGAP3O43295 1099 aa16.25■□□□□ 0.19
TROAP-212ENST00000550346 LDHAL6AQ6ZMR3 332 aa16.25■□□□□ 0.19
TROAP-212ENST00000550346 CELF1Q92879 486 aaKnown RBP16.25■□□□□ 0.19
TROAP-212ENST00000550346 CNNM1Q9NRU3 951 aa16.25■□□□□ 0.19
TROAP-212ENST00000550346 BSDC1Q9NW68 430 aaPredicted RBP16.25■□□□□ 0.19
TROAP-212ENST00000550346 ATP6V0A2Q9Y487 856 aa16.25■□□□□ 0.19
TROAP-212ENST00000550346 PCDHB15Q9Y5E8 787 aa16.25■□□□□ 0.19
TROAP-212ENST00000550346 ATP8B2P98198 1209 aa16.24■□□□□ 0.19
TROAP-212ENST00000550346 CCDC93Q567U6 631 aa16.24■□□□□ 0.19
TROAP-212ENST00000550346 ANKIB1Q9P2G1 1089 aa16.24■□□□□ 0.19
TROAP-212ENST00000550346 TNRC6CQ9HCJ0 1690 aaKnown RBP16.24■□□□□ 0.19
TROAP-212ENST00000550346 RPAP2Q8IXW5 612 aaPredicted RBP16.23■□□□□ 0.19
TROAP-212ENST00000550346 MPNDQ8N594 471 aa16.23■□□□□ 0.19
TROAP-212ENST00000550346 ANKRD2Q9GZV1 360 aa16.23■□□□□ 0.19
TROAP-212ENST00000550346 SLX4Q8IY92 1834 aa16.23■□□□□ 0.19
TROAP-212ENST00000550346 SPEF2Q9C093 1822 aa16.23■□□□□ 0.19
TROAP-212ENST00000550346 HMMRO75330 724 aa16.22■□□□□ 0.19
TROAP-212ENST00000550346 YBX3P16989 372 aaKnown RBP eCLIP16.22■□□□□ 0.197e-8■□□□□ 11.2
TROAP-212ENST00000550346 DPP8Q6V1X1 898 aaPredicted RBP16.22■□□□□ 0.19
TROAP-212ENST00000550346 C7orf43Q8WVR3 580 aa16.22■□□□□ 0.19
TROAP-212ENST00000550346 ZNF594Q96JF6 807 aaPredicted RBP16.22■□□□□ 0.19
TROAP-212ENST00000550346 NSFL1CQ9UNZ2 370 aaKnown RBP16.22■□□□□ 0.19
TROAP-212ENST00000550346 DLEC1Q9Y238 1755 aa16.21■□□□□ 0.19
TROAP-212ENST00000550346 CACNA1SQ13698 1873 aa16.21■□□□□ 0.19
TROAP-212ENST00000550346 G3BP1Q13283 466 aaKnown RBP eCLIP16.21■□□□□ 0.19
TROAP-212ENST00000550346 MTX1Q13505 466 aa16.21■□□□□ 0.19
TROAP-212ENST00000550346 CEP85Q6P2H3 762 aa16.21■□□□□ 0.19
TROAP-212ENST00000550346 SIRT2Q8IXJ6 389 aa16.21■□□□□ 0.19
TROAP-212ENST00000550346 SUPT20HQ8NEM7 779 aa16.21■□□□□ 0.19
TROAP-212ENST00000550346 PPP4R2Q9NY27 417 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms