RNA–Protein interactions for RNA: ENST00000550285.5

PDE1B-206, Transcript of phosphodiesterase 1B, humanhuman

TSL 2

Gene PDE1B, Length 2,209 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-206ENST00000550285 CCDC57Q2TAC2 916 aa17.87■□□□□ 0.45
PDE1B-206ENST00000550285 TRAPPC3LQ5T215 181 aa17.87■□□□□ 0.45
PDE1B-206ENST00000550285 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.87■□□□□ 0.45
PDE1B-206ENST00000550285 TBC1D9Q6ZT07 1266 aa17.87■□□□□ 0.45
PDE1B-206ENST00000550285 UBR3Q6ZT12 1888 aa17.87■□□□□ 0.45
PDE1B-206ENST00000550285 MAP4K4O95819 1239 aaPredicted RBP17.86■□□□□ 0.45
PDE1B-206ENST00000550285 PRKCSHP14314 528 aaPredicted RBP17.86■□□□□ 0.45
PDE1B-206ENST00000550285 RFC4P35249 363 aa17.86■□□□□ 0.45
PDE1B-206ENST00000550285 PI4K2BQ8TCG2 481 aa17.86■□□□□ 0.45
PDE1B-206ENST00000550285 TUBGCP6Q96RT7 1819 aa17.86■□□□□ 0.45
PDE1B-206ENST00000550285 DDX60Q8IY21 1712 aaKnown RBP17.86■□□□□ 0.45
PDE1B-206ENST00000550285 ITGA6P23229 1130 aa17.86■□□□□ 0.45
PDE1B-206ENST00000550285 ERFEQ4G0M1 354 aa17.86■□□□□ 0.45
PDE1B-206ENST00000550285 USP42Q9H9J4 1324 aaKnown RBP17.85■□□□□ 0.45
PDE1B-206ENST00000550285 IFIT2P09913 472 aaKnown RBP17.85■□□□□ 0.45
PDE1B-206ENST00000550285 IFIT5Q13325 482 aaKnown RBP17.85■□□□□ 0.45
PDE1B-206ENST00000550285 EYA2O00167 538 aa17.84■□□□□ 0.45
PDE1B-206ENST00000550285 MFAP1P55081 439 aaKnown RBP17.84■□□□□ 0.45
PDE1B-206ENST00000550285 CCDC24Q8N4L8 307 aa17.84■□□□□ 0.45
PDE1B-206ENST00000550285 PLSCR1O15162 318 aa17.84■□□□□ 0.45
PDE1B-206ENST00000550285 TNNI3KQ59H18 835 aa17.83■□□□□ 0.45
PDE1B-206ENST00000550285 C3orf67Q6ZVT6 689 aa17.83■□□□□ 0.45
PDE1B-206ENST00000550285 FPGT-TNNI3KV9GXZ4 949 aa17.83■□□□□ 0.45
PDE1B-206ENST00000550285 TRIM6-TRIM34B2RNG4 842 aa17.83■□□□□ 0.44
PDE1B-206ENST00000550285 CDC45O75419 566 aa17.83■□□□□ 0.44
PDE1B-206ENST00000550285 ZNF827Q17R98 1081 aa17.83■□□□□ 0.44
PDE1B-206ENST00000550285 RILPL2Q969X0 211 aa17.83■□□□□ 0.44
PDE1B-206ENST00000550285 TNS1Q9HBL0 1735 aaKnown RBP17.83■□□□□ 0.44
PDE1B-206ENST00000550285 SEC31BQ9NQW1 1179 aa17.83■□□□□ 0.44
PDE1B-206ENST00000550285 TAF7LQ5H9L4 462 aa17.82■□□□□ 0.44
PDE1B-206ENST00000550285 SETDB2Q96T68 719 aa17.82■□□□□ 0.44
PDE1B-206ENST00000550285 AOX1Q06278 1338 aa17.82■□□□□ 0.44
PDE1B-206ENST00000550285 IL15P40933 162 aaPredicted RBP17.82■□□□□ 0.44
PDE1B-206ENST00000550285 ECHDC1Q9NTX5 307 aa17.82■□□□□ 0.44
PDE1B-206ENST00000550285 DBNLQ9UJU6 430 aaKnown RBP17.82■□□□□ 0.44
PDE1B-206ENST00000550285 ANKRD18BA2A2Z9 1011 aa17.81■□□□□ 0.44
PDE1B-206ENST00000550285 TIMM10P62072 90 aa17.81■□□□□ 0.44
PDE1B-206ENST00000550285 ABCC12Q96J65 1359 aa17.81■□□□□ 0.44
PDE1B-206ENST00000550285 COL4A1P02462 1669 aa17.81■□□□□ 0.44
PDE1B-206ENST00000550285 CIAO1O76071 339 aa17.8■□□□□ 0.44
PDE1B-206ENST00000550285 DBNDD2Q9BQY9 259 aa17.8■□□□□ 0.44
PDE1B-206ENST00000550285 TTC41PQ6P2S7 1318 aa17.8■□□□□ 0.44
PDE1B-206ENST00000550285 RGL2O15211 777 aa17.8■□□□□ 0.44
PDE1B-206ENST00000550285 NFIXQ14938 502 aa17.8■□□□□ 0.44
PDE1B-206ENST00000550285 LDHAL6AQ6ZMR3 332 aa17.8■□□□□ 0.44
PDE1B-206ENST00000550285 GYS1P13807 737 aa17.79■□□□□ 0.44
PDE1B-206ENST00000550285 ADRA2BP18089 450 aa17.79■□□□□ 0.44
PDE1B-206ENST00000550285 NBPF5PQ86XG9 351 aaPredicted RBP17.79■□□□□ 0.44
PDE1B-206ENST00000550285 RIPOR2Q9Y4F9 1068 aa17.79■□□□□ 0.44
PDE1B-206ENST00000550285 LAMB2P55268 1798 aa17.79■□□□□ 0.44
PDE1B-206ENST00000550285 COL24A1Q17RW2 1714 aa17.79■□□□□ 0.44
PDE1B-206ENST00000550285 SSFA2P28290 1259 aa17.79■□□□□ 0.44
PDE1B-206ENST00000550285 GTF2E1P29083 439 aaPredicted RBP17.79■□□□□ 0.44
PDE1B-206ENST00000550285 NEUROD6Q96NK8 337 aa17.79■□□□□ 0.44
PDE1B-206ENST00000550285 TAF1P21675 1872 aa17.78■□□□□ 0.44
PDE1B-206ENST00000550285 CASZ1Q86V15 1759 aa17.78■□□□□ 0.44
PDE1B-206ENST00000550285 AKT1S1Q96B36 256 aa17.78■□□□□ 0.44
PDE1B-206ENST00000550285 GLRX3O76003 335 aaKnown RBP17.78■□□□□ 0.44
PDE1B-206ENST00000550285 BOLA2Q9H3K6 86 aa17.78■□□□□ 0.44
PDE1B-206ENST00000550285 TFCP2L1Q9NZI6 479 aa17.78■□□□□ 0.44
PDE1B-206ENST00000550285 RIC1Q4ADV7 1423 aa17.77■□□□□ 0.44
PDE1B-206ENST00000550285 ANP32AP39687 249 aaKnown RBP17.77■□□□□ 0.44
PDE1B-206ENST00000550285 EN1Q05925 392 aaPredicted RBP17.77■□□□□ 0.44
PDE1B-206ENST00000550285 CNNM1Q9NRU3 951 aa17.77■□□□□ 0.44
PDE1B-206ENST00000550285 CEP126Q9P2H0 1117 aa17.77■□□□□ 0.44
PDE1B-206ENST00000550285 NDUFB9Q9Y6M9 179 aa17.77■□□□□ 0.44
PDE1B-206ENST00000550285 EZH2Q15910 746 aaKnown RBP17.76■□□□□ 0.43
PDE1B-206ENST00000550285 CCDC152Q4G0S7 254 aa17.76■□□□□ 0.43
PDE1B-206ENST00000550285 ERICH6Q7L0X2 663 aa17.76■□□□□ 0.43
PDE1B-206ENST00000550285 GPATCH3Q96I76 525 aa17.76■□□□□ 0.43
PDE1B-206ENST00000550285 TBC1D32Q96NH3 1257 aa17.76■□□□□ 0.43
PDE1B-206ENST00000550285 SPEF2Q9C093 1822 aa17.76■□□□□ 0.43
PDE1B-206ENST00000550285 AK9Q5TCS8 1911 aa17.76■□□□□ 0.43
PDE1B-206ENST00000550285 A0A1B0GUL7 405 aa17.76■□□□□ 0.43
PDE1B-206ENST00000550285 ERC2O15083 957 aa17.76■□□□□ 0.43
PDE1B-206ENST00000550285 SLC10A5Q5PT55 438 aa17.76■□□□□ 0.43
PDE1B-206ENST00000550285 HELBQ8NG08 1087 aaPredicted RBP17.76■□□□□ 0.43
PDE1B-206ENST00000550285 ZNF609O15014 1411 aa17.76■□□□□ 0.43
PDE1B-206ENST00000550285 ADORA1P30542 326 aa17.75■□□□□ 0.43
PDE1B-206ENST00000550285 METTL24Q5JXM2 366 aa17.75■□□□□ 0.43
PDE1B-206ENST00000550285 TPTE2Q6XPS3 522 aa17.75■□□□□ 0.43
PDE1B-206ENST00000550285 COL23A1Q86Y22 540 aaPredicted RBP17.75■□□□□ 0.43
PDE1B-206ENST00000550285 EDC3Q96F86 508 aaKnown RBP17.75■□□□□ 0.43
PDE1B-206ENST00000550285 NYXQ9GZU5 481 aa17.75■□□□□ 0.43
PDE1B-206ENST00000550285 FBXO3Q9UK99 471 aa17.75■□□□□ 0.43
PDE1B-206ENST00000550285 CHMLP26374 656 aa17.75■□□□□ 0.43
PDE1B-206ENST00000550285 C22orf23Q9BZE7 217 aa17.75■□□□□ 0.43
PDE1B-206ENST00000550285 UPF2Q9HAU5 1272 aaKnown RBP17.75■□□□□ 0.43
PDE1B-206ENST00000550285 GPR108Q9NPR9 543 aa17.75■□□□□ 0.43
PDE1B-206ENST00000550285 IL25Q9H293 177 aa17.74■□□□□ 0.43
PDE1B-206ENST00000550285 SNAP23O00161 211 aa17.74■□□□□ 0.43
PDE1B-206ENST00000550285 MSH5O43196 834 aa17.74■□□□□ 0.43
PDE1B-206ENST00000550285 SF3B3Q15393 1217 aaKnown RBP17.74■□□□□ 0.43
PDE1B-206ENST00000550285 VGLL2Q8N8G2 317 aa17.74■□□□□ 0.43
PDE1B-206ENST00000550285 CARMIL3Q8ND23 1372 aa17.73■□□□□ 0.43
PDE1B-206ENST00000550285 TM4SF1P30408 202 aa17.73■□□□□ 0.43
PDE1B-206ENST00000550285 CAMKK2Q96RR4 588 aa17.73■□□□□ 0.43
PDE1B-206ENST00000550285 LRP5O75197 1615 aa17.73■□□□□ 0.43
PDE1B-206ENST00000550285 NPHP1O15259 732 aa17.72■□□□□ 0.43
PDE1B-206ENST00000550285 HSP90B1P14625 803 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms