RNA–Protein interactions for RNA: ENST00000549549.1

PRIM1-204, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-204ENST00000549549 VPS37DQ86XT2 251 aa13.55□□□□□ -0.24
PRIM1-204ENST00000549549 BCO2Q9BYV7 579 aa13.55□□□□□ -0.24
PRIM1-204ENST00000549549 NPHS2Q9NP85 383 aa13.55□□□□□ -0.24
PRIM1-204ENST00000549549 LRRC69Q6ZNQ3 347 aa13.54□□□□□ -0.24
PRIM1-204ENST00000549549 LINC00528Q8N1L1 170 aa13.54□□□□□ -0.24
PRIM1-204ENST00000549549 RNF217Q8TC41 542 aa13.53□□□□□ -0.24
PRIM1-204ENST00000549549 A0A1B0GTH6 734 aa13.52□□□□□ -0.25
PRIM1-204ENST00000549549 POLR3DP05423 398 aaPredicted RBP13.52□□□□□ -0.25
PRIM1-204ENST00000549549 EPB42P16452 691 aa13.52□□□□□ -0.25
PRIM1-204ENST00000549549 MSX1P28360 303 aa13.52□□□□□ -0.25
PRIM1-204ENST00000549549 TYRO3Q06418 890 aa13.52□□□□□ -0.25
PRIM1-204ENST00000549549 SOGA3Q5TF21 947 aa13.52□□□□□ -0.25
PRIM1-204ENST00000549549 MCF2L2Q86YR7 1114 aa13.52□□□□□ -0.25
PRIM1-204ENST00000549549 SPNS2Q8IVW8 549 aa13.52□□□□□ -0.25
PRIM1-204ENST00000549549 HPS1Q92902 700 aa13.52□□□□□ -0.25
PRIM1-204ENST00000549549 PMEPA1Q969W9 287 aa13.52□□□□□ -0.25
PRIM1-204ENST00000549549 SUV39H2Q9H5I1 410 aa13.52□□□□□ -0.25
PRIM1-204ENST00000549549 CNTN3Q9P232 1028 aa13.52□□□□□ -0.25
PRIM1-204ENST00000549549 EREGO14944 169 aa13.51□□□□□ -0.25
PRIM1-204ENST00000549549 FGRP09769 529 aa13.51□□□□□ -0.25
PRIM1-204ENST00000549549 CCDC144BQ3MJ40 725 aa13.51□□□□□ -0.25
PRIM1-204ENST00000549549 ARSJQ5FYB0 599 aaPredicted RBP13.51□□□□□ -0.25
PRIM1-204ENST00000549549 C1orf127Q8N9H9 656 aa13.51□□□□□ -0.25
PRIM1-204ENST00000549549 HIRIP3Q9BW71 556 aaPredicted RBP13.51□□□□□ -0.25
PRIM1-204ENST00000549549 XYLBO75191 536 aa13.5□□□□□ -0.25
PRIM1-204ENST00000549549 LYSMD3Q7Z3D4 306 aa13.5□□□□□ -0.25
PRIM1-204ENST00000549549 PRICKLE2Q7Z3G6 844 aa13.5□□□□□ -0.25
PRIM1-204ENST00000549549 NOC4LQ9BVI4 516 aaKnown RBP13.5□□□□□ -0.25
PRIM1-204ENST00000549549 ABI2Q9NYB9 513 aaPredicted RBP13.5□□□□□ -0.25
PRIM1-204ENST00000549549 A0A1W2PNR3 127 aa13.49□□□□□ -0.25
PRIM1-204ENST00000549549 UPP2O95045 317 aa13.49□□□□□ -0.25
PRIM1-204ENST00000549549 ATF4P18848 351 aaPredicted RBP13.49□□□□□ -0.25
PRIM1-204ENST00000549549 VEGFBP49765 207 aa13.49□□□□□ -0.25
PRIM1-204ENST00000549549 PAK2Q13177 524 aa13.49□□□□□ -0.25
PRIM1-204ENST00000549549 GRM2Q14416 872 aa13.49□□□□□ -0.25
PRIM1-204ENST00000549549 KIAA0319Q5VV43 1072 aa13.49□□□□□ -0.25
PRIM1-204ENST00000549549 NLRP13Q86W25 1043 aa13.49□□□□□ -0.25
PRIM1-204ENST00000549549 COPRSQ9NQ92 184 aa13.49□□□□□ -0.25
PRIM1-204ENST00000549549 GADD45BO75293 160 aaPredicted RBP13.48□□□□□ -0.25
PRIM1-204ENST00000549549 RASGRP4Q8TDF6 673 aa13.48□□□□□ -0.25
PRIM1-204ENST00000549549 RSRP1Q9BUV0 290 aa13.48□□□□□ -0.25
PRIM1-204ENST00000549549 TIMMDC1Q9NPL8 285 aa13.48□□□□□ -0.25
PRIM1-204ENST00000549549 GSTT1P30711 240 aa13.47□□□□□ -0.25
PRIM1-204ENST00000549549 GLIS3Q8NEA6 775 aa13.47□□□□□ -0.25
PRIM1-204ENST00000549549 GPRASP2Q96D09 838 aa13.47□□□□□ -0.25
PRIM1-204ENST00000549549 CRISPLD1Q9H336 500 aa13.47□□□□□ -0.25
PRIM1-204ENST00000549549 TNFRSF10AO00220 468 aa13.46□□□□□ -0.25
PRIM1-204ENST00000549549 CAPN5O15484 640 aaPredicted RBP13.46□□□□□ -0.25
PRIM1-204ENST00000549549 PRR20EP86478 221 aa13.46□□□□□ -0.25
PRIM1-204ENST00000549549 PRR20CP86479 221 aa13.46□□□□□ -0.25
PRIM1-204ENST00000549549 PRR20DP86480 221 aa13.46□□□□□ -0.25
PRIM1-204ENST00000549549 PRR20BP86481 221 aa13.46□□□□□ -0.25
PRIM1-204ENST00000549549 PRR20AP86496 221 aa13.46□□□□□ -0.25
PRIM1-204ENST00000549549 C3orf58Q8NDZ4 430 aa13.46□□□□□ -0.25
PRIM1-204ENST00000549549 ANKRD24Q8TF21 1146 aa13.46□□□□□ -0.25
PRIM1-204ENST00000549549 CEP63Q96MT8 703 aa13.46□□□□□ -0.25
PRIM1-204ENST00000549549 SAMD5Q5TGI4 173 aa13.45□□□□□ -0.26
PRIM1-204ENST00000549549 TLDC2A0PJX2 215 aa13.44□□□□□ -0.26
PRIM1-204ENST00000549549 CDK11BP21127 795 aaKnown RBP13.44□□□□□ -0.26
PRIM1-204ENST00000549549 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.44□□□□□ -0.26
PRIM1-204ENST00000549549 KBTBD4Q9NVX7 518 aa13.44□□□□□ -0.26
PRIM1-204ENST00000549549 PPP4R2Q9NY27 417 aa13.44□□□□□ -0.26
PRIM1-204ENST00000549549 TRAK1Q9UPV9 953 aa13.44□□□□□ -0.26
PRIM1-204ENST00000549549 CDK11AQ9UQ88 783 aaPredicted RBP13.44□□□□□ -0.26
PRIM1-204ENST00000549549 A0A0G2JS52 829 aa13.43□□□□□ -0.26
PRIM1-204ENST00000549549 BMP2P12643 396 aa13.43□□□□□ -0.26
PRIM1-204ENST00000549549 CES1P23141 567 aa13.43□□□□□ -0.26
PRIM1-204ENST00000549549 KCNQ4P56696 695 aa13.43□□□□□ -0.26
PRIM1-204ENST00000549549 TTC39BQ5VTQ0 682 aaPredicted RBP13.43□□□□□ -0.26
PRIM1-204ENST00000549549 TRIM67Q6ZTA4 783 aa13.43□□□□□ -0.26
PRIM1-204ENST00000549549 TMA7Q9Y2S6 64 aaKnown RBP13.43□□□□□ -0.26
PRIM1-204ENST00000549549 A0A1W2PP55 124 aa13.42□□□□□ -0.26
PRIM1-204ENST00000549549 STK10O94804 968 aaKnown RBP13.42□□□□□ -0.26
PRIM1-204ENST00000549549 MAP3K10Q02779 954 aa13.42□□□□□ -0.26
PRIM1-204ENST00000549549 NLRP8Q86W28 1048 aa13.42□□□□□ -0.26
PRIM1-204ENST00000549549 PMFBP1Q8TBY8 1022 aa13.42□□□□□ -0.26
PRIM1-204ENST00000549549 PIF1Q9H611 641 aa13.42□□□□□ -0.26
PRIM1-204ENST00000549549 PRPF40BQ6NWY9 871 aaKnown RBP13.41□□□□□ -0.26
PRIM1-204ENST00000549549 SEC16BQ96JE7 1060 aa13.41□□□□□ -0.26
PRIM1-204ENST00000549549 BRD7Q9NPI1 651 aa13.41□□□□□ -0.26
PRIM1-204ENST00000549549 GJA3Q9Y6H8 435 aa13.41□□□□□ -0.26
PRIM1-204ENST00000549549 RHOQP17081 205 aa13.4□□□□□ -0.26
PRIM1-204ENST00000549549 PWP1Q13610 501 aa13.4□□□□□ -0.26
PRIM1-204ENST00000549549 PEAR1Q5VY43 1037 aaPredicted RBP13.4□□□□□ -0.26
PRIM1-204ENST00000549549 ZCCHC2Q9C0B9 1178 aaKnown RBP13.4□□□□□ -0.26
PRIM1-204ENST00000549549 EDN3P14138 238 aa13.39□□□□□ -0.27
PRIM1-204ENST00000549549 NCLP19338 710 aaKnown RBP13.39□□□□□ -0.27
PRIM1-204ENST00000549549 MRPL14Q6P1L8 145 aaKnown RBP13.39□□□□□ -0.27
PRIM1-204ENST00000549549 SPON2Q9BUD6 331 aa13.39□□□□□ -0.27
PRIM1-204ENST00000549549 OSBPL2Q9H1P3 480 aa13.39□□□□□ -0.27
PRIM1-204ENST00000549549 EHD4Q9H223 541 aa13.39□□□□□ -0.27
PRIM1-204ENST00000549549 PPM1HQ9ULR3 514 aa13.39□□□□□ -0.27
PRIM1-204ENST00000549549 TTF2Q9UNY4 1162 aaKnown RBP13.39□□□□□ -0.27
PRIM1-204ENST00000549549 XRCC5P13010 732 aaKnown RBP13.38□□□□□ -0.27
PRIM1-204ENST00000549549 ZSWIM4Q9H7M6 989 aa13.38□□□□□ -0.27
PRIM1-204ENST00000549549 ADAMTS1Q9UHI8 967 aa13.38□□□□□ -0.27
PRIM1-204ENST00000549549 SALL4Q9UJQ4 1053 aa13.38□□□□□ -0.27
PRIM1-204ENST00000549549 TBX22Q9Y458 520 aa13.38□□□□□ -0.27
PRIM1-204ENST00000549549 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.38□□□□□ -0.27
PRIM1-204ENST00000549549 TTLL8A6PVC2 850 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms