RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 USP42Q9H9J4 1324 aaKnown RBP8.88□□□□□ -0.99
TMEM116-208ENST00000549537 FCHSD2O94868 740 aa8.88□□□□□ -0.99
TMEM116-208ENST00000549537 U2AF1L5P0DN76 240 aaPredicted RBP8.88□□□□□ -0.99
TMEM116-208ENST00000549537 U2AF1Q01081 240 aaKnown RBP eCLIP8.88□□□□□ -0.991e-6■■□□□ 12.9
TMEM116-208ENST00000549537 GPR162Q16538 588 aa8.88□□□□□ -0.99
TMEM116-208ENST00000549537 NLGN1Q8N2Q7 840 aa8.88□□□□□ -0.99
TMEM116-208ENST00000549537 ZNF516Q92618 1163 aa8.88□□□□□ -0.99
TMEM116-208ENST00000549537 CCDC87Q9NVE4 849 aa8.88□□□□□ -0.99
TMEM116-208ENST00000549537 NUDCQ9Y266 331 aa8.88□□□□□ -0.99
TMEM116-208ENST00000549537 PXDNLA1KZ92 1463 aa8.88□□□□□ -0.99
TMEM116-208ENST00000549537 LCE2BO14633 110 aa8.87□□□□□ -0.99
TMEM116-208ENST00000549537 RFC4P35249 363 aa8.87□□□□□ -0.99
TMEM116-208ENST00000549537 APLP1P51693 650 aa8.87□□□□□ -0.99
TMEM116-208ENST00000549537 ZNF790Q6PG37 636 aa8.87□□□□□ -0.99
TMEM116-208ENST00000549537 ZNF496Q96IT1 587 aaPredicted RBP8.87□□□□□ -0.99
TMEM116-208ENST00000549537 SRP68Q9UHB9 627 aaKnown RBP8.87□□□□□ -0.99
TMEM116-208ENST00000549537 BRCA1P38398 1863 aaKnown RBP8.87□□□□□ -0.99
TMEM116-208ENST00000549537 HEG1Q9ULI3 1381 aa8.86□□□□□ -0.99
TMEM116-208ENST00000549537 DLG5Q8TDM6 1919 aa8.86□□□□□ -0.99
TMEM116-208ENST00000549537 GIGYF1O75420 1035 aaPredicted RBP8.86□□□□□ -0.99
TMEM116-208ENST00000549537 OSBPP22059 807 aa8.86□□□□□ -0.99
TMEM116-208ENST00000549537 DDR1Q08345 913 aa8.86□□□□□ -0.99
TMEM116-208ENST00000549537 TEFQ10587 303 aa8.86□□□□□ -0.99
TMEM116-208ENST00000549537 SMYD5Q6GMV2 418 aa8.86□□□□□ -0.99
TMEM116-208ENST00000549537 PLEKHF1Q96S99 279 aa8.86□□□□□ -0.99
TMEM116-208ENST00000549537 ZBTB1Q9Y2K1 713 aa8.86□□□□□ -0.99
TMEM116-208ENST00000549537 N4BP2Q86UW6 1770 aaPredicted RBP8.86□□□□□ -0.99
TMEM116-208ENST00000549537 COL15A1P39059 1388 aa8.86□□□□□ -0.99
TMEM116-208ENST00000549537 NRXN2Q9P2S2 1712 aa8.85□□□□□ -0.99
TMEM116-208ENST00000549537 KCNQ3O43525 872 aa8.85□□□□□ -0.99
TMEM116-208ENST00000549537 TM4SF1P30408 202 aa8.85□□□□□ -0.99
TMEM116-208ENST00000549537 ZNF787Q6DD87 383 aa8.85□□□□□ -0.99
TMEM116-208ENST00000549537 SCN7AQ01118 1682 aa8.85□□□□□ -0.99
TMEM116-208ENST00000549537 C3orf80F5H4A9 247 aa8.84□□□□□ -0.99
TMEM116-208ENST00000549537 HTATSF1O43719 755 aaKnown RBP8.84□□□□□ -0.99
TMEM116-208ENST00000549537 GRIN3BO60391 1043 aa8.84□□□□□ -0.99
TMEM116-208ENST00000549537 EIF5P55010 431 aaKnown RBP8.84□□□□□ -0.99
TMEM116-208ENST00000549537 TGFB2P61812 414 aa8.84□□□□□ -0.99
TMEM116-208ENST00000549537 DDX10Q13206 875 aaKnown RBP8.84□□□□□ -0.99
TMEM116-208ENST00000549537 RALBP1Q15311 655 aa8.84□□□□□ -0.99
TMEM116-208ENST00000549537 MCM10Q7L590 875 aa8.84□□□□□ -0.99
TMEM116-208ENST00000549537 TTC5Q8N0Z6 440 aa8.84□□□□□ -0.99
TMEM116-208ENST00000549537 NARFQ9UHQ1 456 aa8.84□□□□□ -0.99
TMEM116-208ENST00000549537 AFDNP55196 1824 aaKnown RBP8.84□□□□□ -0.99
TMEM116-208ENST00000549537 ADCY9O60503 1353 aa8.84□□□□□ -0.99
TMEM116-208ENST00000549537 KDM3BQ7LBC6 1761 aa8.84□□□□□ -1
TMEM116-208ENST00000549537 BTBD11A6QL63 1104 aa8.83□□□□□ -1
TMEM116-208ENST00000549537 POLRMTO00411 1230 aaKnown RBP8.83□□□□□ -1
TMEM116-208ENST00000549537 ZPR1O75312 459 aa8.83□□□□□ -1
TMEM116-208ENST00000549537 STARD3NLO95772 234 aa8.83□□□□□ -1
TMEM116-208ENST00000549537 KCNA3P22001 575 aa8.83□□□□□ -1
TMEM116-208ENST00000549537 DCTN1Q14203 1278 aa8.83□□□□□ -1
TMEM116-208ENST00000549537 SWT1Q5T5J6 900 aaKnown RBP8.83□□□□□ -1
TMEM116-208ENST00000549537 USPL1Q5W0Q7 1092 aa8.83□□□□□ -1
TMEM116-208ENST00000549537 TTC13Q8NBP0 860 aa8.83□□□□□ -1
TMEM116-208ENST00000549537 FMNL2Q96PY5 1086 aa8.83□□□□□ -1
TMEM116-208ENST00000549537 CDHR5Q9HBB8 845 aa8.83□□□□□ -1
TMEM116-208ENST00000549537 PARP3Q9Y6F1 533 aa8.83□□□□□ -1
TMEM116-208ENST00000549537 BCORQ6W2J9 1755 aa8.83□□□□□ -1
TMEM116-208ENST00000549537 A0A0G2JLW4 131 aa8.82□□□□□ -1
TMEM116-208ENST00000549537 COPS2P61201 443 aa8.82□□□□□ -1
TMEM116-208ENST00000549537 NKX2-3Q8TAU0 364 aa8.82□□□□□ -1
TMEM116-208ENST00000549537 TEX13AQ9BXU3 409 aaPredicted RBP8.82□□□□□ -1
TMEM116-208ENST00000549537 WWC3Q9ULE0 1092 aa8.82□□□□□ -1
TMEM116-208ENST00000549537 ARFGEF1Q9Y6D6 1849 aa8.82□□□□□ -1
TMEM116-208ENST00000549537 LAMB4A4D0S4 1761 aa8.81□□□□□ -1
TMEM116-208ENST00000549537 PRAMEF22A3QJZ6 481 aa8.81□□□□□ -1
TMEM116-208ENST00000549537 A1BGP04217 495 aa8.81□□□□□ -1
TMEM116-208ENST00000549537 DPEP1P16444 411 aa8.81□□□□□ -1
TMEM116-208ENST00000549537 CANXP27824 592 aaKnown RBP8.81□□□□□ -1
TMEM116-208ENST00000549537 IL6STP40189 918 aaPredicted RBP8.81□□□□□ -1
TMEM116-208ENST00000549537 BRPF1P55201 1214 aaPredicted RBP8.81□□□□□ -1
TMEM116-208ENST00000549537 NFIXQ14938 502 aa8.81□□□□□ -1
TMEM116-208ENST00000549537 NFE2L2Q16236 605 aa8.81□□□□□ -1
TMEM116-208ENST00000549537 PADI6Q6TGC4 694 aa8.81□□□□□ -1
TMEM116-208ENST00000549537 RTF1Q92541 710 aaKnown RBP8.81□□□□□ -1
TMEM116-208ENST00000549537 DLEC1Q9Y238 1755 aa8.81□□□□□ -1
TMEM116-208ENST00000549537 MYBBP1AQ9BQG0 1328 aaKnown RBP8.8□□□□□ -1
TMEM116-208ENST00000549537 ATP10DQ9P241 1426 aa8.8□□□□□ -1
TMEM116-208ENST00000549537 TAF7Q15545 349 aaPredicted RBP8.8□□□□□ -1
TMEM116-208ENST00000549537 PCDHB3Q9Y5E6 796 aa8.8□□□□□ -1
TMEM116-208ENST00000549537 USP16Q9Y5T5 823 aa8.8□□□□□ -1
TMEM116-208ENST00000549537 ANKRD31Q8N7Z5 1873 aa8.79□□□□□ -1
TMEM116-208ENST00000549537 CARMIL3Q8ND23 1372 aa8.79□□□□□ -1
TMEM116-208ENST00000549537 A0A087WZG4 1122 aa8.79□□□□□ -1
TMEM116-208ENST00000549537 CAMTA2O94983 1202 aa8.79□□□□□ -1
TMEM116-208ENST00000549537 SNRPA1P09661 255 aaKnown RBP8.79□□□□□ -1
TMEM116-208ENST00000549537 SERPINB2P05120 415 aa8.78□□□□□ -1
TMEM116-208ENST00000549537 HSPA6P17066 643 aa8.78□□□□□ -1
TMEM116-208ENST00000549537 TBC1D9BQ66K14 1250 aa8.78□□□□□ -1
TMEM116-208ENST00000549537 NBPF10Q6P3W6 841 aaKnown RBP8.78□□□□□ -1
TMEM116-208ENST00000549537 NBPF15Q8N660 670 aa8.78□□□□□ -1
TMEM116-208ENST00000549537 ZC3H15Q8WU90 426 aaKnown RBP8.78□□□□□ -1
TMEM116-208ENST00000549537 THUMPD2Q9BTF0 503 aaKnown RBP8.78□□□□□ -1
TMEM116-208ENST00000549537 PNNQ9H307 717 aaKnown RBP8.78□□□□□ -1
TMEM116-208ENST00000549537 PRKRIP1Q9H875 184 aaPredicted RBP8.78□□□□□ -1
TMEM116-208ENST00000549537 NPDC1Q9NQX5 325 aaPredicted RBP8.78□□□□□ -1
TMEM116-208ENST00000549537 MIS18AQ9NYP9 233 aa8.78□□□□□ -1
TMEM116-208ENST00000549537 TBC1D2BQ9UPU7 963 aa8.78□□□□□ -1
TMEM116-208ENST00000549537 MAPK8IP3Q9UPT6 1336 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms