RNA–Protein interactions for RNA: ENST00000549425.5

TMEM116-207, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 3

Gene TMEM116, Length 615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-207ENST00000549425 HEG1Q9ULI3 1381 aa11.69□□□□□ -0.54
TMEM116-207ENST00000549425 SLC24A1O60721 1099 aa11.69□□□□□ -0.54
TMEM116-207ENST00000549425 EGFRP00533 1210 aa11.69□□□□□ -0.54
TMEM116-207ENST00000549425 SLC4A8Q2Y0W8 1093 aa11.69□□□□□ -0.54
TMEM116-207ENST00000549425 RBM26Q5T8P6 1007 aaKnown RBP11.69□□□□□ -0.54
TMEM116-207ENST00000549425 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.69□□□□□ -0.54
TMEM116-207ENST00000549425 SUPT20HQ8NEM7 779 aa11.69□□□□□ -0.54
TMEM116-207ENST00000549425 ZNF496Q96IT1 587 aaPredicted RBP11.69□□□□□ -0.54
TMEM116-207ENST00000549425 CFHR5Q9BXR6 569 aa11.69□□□□□ -0.54
TMEM116-207ENST00000549425 GGA3Q9NZ52 723 aa11.69□□□□□ -0.54
TMEM116-207ENST00000549425 ZBTB12Q9Y330 459 aaPredicted RBP11.69□□□□□ -0.54
TMEM116-207ENST00000549425 FKBP1BP68106 108 aa11.68□□□□□ -0.54
TMEM116-207ENST00000549425 NEUROD1Q13562 356 aa11.68□□□□□ -0.54
TMEM116-207ENST00000549425 SULT6B1Q6IMI4 303 aa11.68□□□□□ -0.54
TMEM116-207ENST00000549425 SIN3AQ96ST3 1273 aa11.68□□□□□ -0.54
TMEM116-207ENST00000549425 CARD14Q9BXL6 1004 aa11.68□□□□□ -0.54
TMEM116-207ENST00000549425 PRO3102Q9H379 93 aa11.68□□□□□ -0.54
TMEM116-207ENST00000549425 STXBP5LQ9Y2K9 1186 aa11.68□□□□□ -0.54
TMEM116-207ENST00000549425 ZNF609O15014 1411 aa11.68□□□□□ -0.54
TMEM116-207ENST00000549425 RIC1Q4ADV7 1423 aa11.68□□□□□ -0.54
TMEM116-207ENST00000549425 PRAMEF22A3QJZ6 481 aa11.67□□□□□ -0.54
TMEM116-207ENST00000549425 COL9A1P20849 921 aa11.67□□□□□ -0.54
TMEM116-207ENST00000549425 PIP4K2AP48426 406 aaPredicted RBP11.67□□□□□ -0.54
TMEM116-207ENST00000549425 ANKRD13DQ6ZTN6 518 aa11.67□□□□□ -0.54
TMEM116-207ENST00000549425 RBM17Q96I25 401 aaKnown RBP11.67□□□□□ -0.54
TMEM116-207ENST00000549425 ZNF333Q96JL9 665 aa11.67□□□□□ -0.54
TMEM116-207ENST00000549425 KIF7Q2M1P5 1343 aa11.66□□□□□ -0.54
TMEM116-207ENST00000549425 A0A1W2PPC1 479 aa11.66□□□□□ -0.54
TMEM116-207ENST00000549425 HOXA10P31260 410 aaPredicted RBP11.66□□□□□ -0.54
TMEM116-207ENST00000549425 MOB2Q70IA6 237 aa11.66□□□□□ -0.54
TMEM116-207ENST00000549425 NUTM1Q86Y26 1132 aa11.66□□□□□ -0.54
TMEM116-207ENST00000549425 DEFB123Q8N688 67 aa11.66□□□□□ -0.54
TMEM116-207ENST00000549425 DPF2Q92785 391 aa11.66□□□□□ -0.54
TMEM116-207ENST00000549425 ERO1AQ96HE7 468 aa11.66□□□□□ -0.54
TMEM116-207ENST00000549425 LAMB4A4D0S4 1761 aa11.66□□□□□ -0.54
TMEM116-207ENST00000549425 YDJCA8MPS7 323 aa11.65□□□□□ -0.54
TMEM116-207ENST00000549425 ALDH1A1P00352 501 aa11.65□□□□□ -0.54
TMEM116-207ENST00000549425 MYCP01106 439 aaPredicted RBP11.65□□□□□ -0.54
TMEM116-207ENST00000549425 KIAA2012Q0VF49 1180 aa11.65□□□□□ -0.54
TMEM116-207ENST00000549425 KIF4BQ2VIQ3 1234 aa11.65□□□□□ -0.54
TMEM116-207ENST00000549425 CD99L2Q8TCZ2 262 aa11.65□□□□□ -0.54
TMEM116-207ENST00000549425 EFCC1Q9HA90 598 aa11.65□□□□□ -0.54
TMEM116-207ENST00000549425 UBE2Q2LH0YL09 131 aa11.64□□□□□ -0.55
TMEM116-207ENST00000549425 TTLL12Q14166 644 aaPredicted RBP11.64□□□□□ -0.55
TMEM116-207ENST00000549425 SLC9C1Q4G0N8 1177 aa11.64□□□□□ -0.55
TMEM116-207ENST00000549425 DPP8Q6V1X1 898 aaPredicted RBP11.64□□□□□ -0.55
TMEM116-207ENST00000549425 Q7L0L9 218 aa11.64□□□□□ -0.55
TMEM116-207ENST00000549425 CRAMP1Q96RY5 1269 aa11.64□□□□□ -0.55
TMEM116-207ENST00000549425 RTFDC1Q9BY42 306 aaPredicted RBP11.64□□□□□ -0.55
TMEM116-207ENST00000549425 NYXQ9GZU5 481 aa11.64□□□□□ -0.55
TMEM116-207ENST00000549425 ASTN2O75129 1339 aaPredicted RBP11.63□□□□□ -0.55
TMEM116-207ENST00000549425 PSMD14O00487 310 aa11.63□□□□□ -0.55
TMEM116-207ENST00000549425 ZNF790Q6PG37 636 aa11.63□□□□□ -0.55
TMEM116-207ENST00000549425 NBPF11Q86T75 865 aa11.63□□□□□ -0.55
TMEM116-207ENST00000549425 ATP6V0A2Q9Y487 856 aa11.63□□□□□ -0.55
TMEM116-207ENST00000549425 ERBB4Q15303 1308 aa11.62□□□□□ -0.55
TMEM116-207ENST00000549425 WTIPA6NIX2 430 aaPredicted RBP11.62□□□□□ -0.55
TMEM116-207ENST00000549425 ANGEL2Q5VTE6 544 aaKnown RBP11.62□□□□□ -0.55
TMEM116-207ENST00000549425 FMNL2Q96PY5 1086 aa11.62□□□□□ -0.55
TMEM116-207ENST00000549425 NR2E3Q9Y5X4 410 aa11.62□□□□□ -0.55
TMEM116-207ENST00000549425 KDM3BQ7LBC6 1761 aa11.62□□□□□ -0.55
TMEM116-207ENST00000549425 RPS12P25398 132 aaKnown RBP11.61□□□□□ -0.55
TMEM116-207ENST00000549425 PLA2G5P39877 138 aa11.61□□□□□ -0.55
TMEM116-207ENST00000549425 RGL2O15211 777 aa11.6□□□□□ -0.55
TMEM116-207ENST00000549425 TCIRG1Q13488 830 aa11.6□□□□□ -0.55
TMEM116-207ENST00000549425 GPR153Q6NV75 609 aa11.6□□□□□ -0.55
TMEM116-207ENST00000549425 HTATIP2Q9BUP3 242 aa11.6□□□□□ -0.55
TMEM116-207ENST00000549425 RAPGEFL1Q9UHV5 662 aa11.6□□□□□ -0.55
TMEM116-207ENST00000549425 TEFQ10587 303 aa11.59□□□□□ -0.55
TMEM116-207ENST00000549425 HLFQ16534 295 aa11.59□□□□□ -0.55
TMEM116-207ENST00000549425 FAM122AQ96E09 287 aa11.59□□□□□ -0.55
TMEM116-207ENST00000549425 MTMR10Q9NXD2 777 aa11.59□□□□□ -0.55
TMEM116-207ENST00000549425 PTCH2Q9Y6C5 1203 aa11.59□□□□□ -0.55
TMEM116-207ENST00000549425 SIPA1L3O60292 1781 aaPredicted RBP11.59□□□□□ -0.55
TMEM116-207ENST00000549425 ABCC4O15439 1325 aa11.59□□□□□ -0.55
TMEM116-207ENST00000549425 DDX60Q8IY21 1712 aaKnown RBP11.58□□□□□ -0.56
TMEM116-207ENST00000549425 ZBTB7BO15156 539 aaPredicted RBP11.58□□□□□ -0.56
TMEM116-207ENST00000549425 CDCA8Q53HL2 280 aa11.58□□□□□ -0.56
TMEM116-207ENST00000549425 IFNL1Q8IU54 200 aa11.58□□□□□ -0.56
TMEM116-207ENST00000549425 DBNDD1Q9H9R9 158 aa11.58□□□□□ -0.56
TMEM116-207ENST00000549425 SCAF8Q9UPN6 1271 aaKnown RBP11.58□□□□□ -0.56
TMEM116-207ENST00000549425 SCARF1Q14162 830 aa11.57□□□□□ -0.56
TMEM116-207ENST00000549425 MTHFSDQ2M296 383 aaKnown RBP11.57□□□□□ -0.56
TMEM116-207ENST00000549425 C3orf67Q6ZVT6 689 aa11.57□□□□□ -0.56
TMEM116-207ENST00000549425 USP16Q9Y5T5 823 aa11.57□□□□□ -0.56
TMEM116-207ENST00000549425 DUOX1Q9NRD9 1551 aa11.57□□□□□ -0.56
TMEM116-207ENST00000549425 EYSQ5T1H1 3165 aa11.57□□□□□ -0.56
TMEM116-207ENST00000549425 IBTKQ9P2D0 1353 aaPredicted RBP11.56□□□□□ -0.56
TMEM116-207ENST00000549425 NUP98P52948 1817 aa11.56□□□□□ -0.56
TMEM116-207ENST00000549425 MANSC4A6NHS7 340 aaPredicted RBP11.56□□□□□ -0.56
TMEM116-207ENST00000549425 NF2P35240 595 aa11.56□□□□□ -0.56
TMEM116-207ENST00000549425 CAP1Q01518 475 aa11.56□□□□□ -0.56
TMEM116-207ENST00000549425 SP3Q02447 781 aa11.56□□□□□ -0.56
TMEM116-207ENST00000549425 CRHR2Q13324 411 aa11.56□□□□□ -0.56
TMEM116-207ENST00000549425 PRAMEF18Q5VWM3 479 aa11.56□□□□□ -0.56
TMEM116-207ENST00000549425 SPRYD7Q5W111 196 aa11.56□□□□□ -0.56
TMEM116-207ENST00000549425 SH3TC2Q8TF17 1288 aa11.56□□□□□ -0.56
TMEM116-207ENST00000549425 SHISA4Q96DD7 197 aa11.56□□□□□ -0.56
TMEM116-207ENST00000549425 STAP2Q9UGK3 403 aa11.56□□□□□ -0.56
TMEM116-207ENST00000549425 RTL9Q8NET4 1388 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms