RNA–Protein interactions for RNA: ENST00000549275.5

TROAP-209, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene TROAP, Length 348 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-209ENST00000549275 HOXA10P31260 410 aaPredicted RBP14.6□□□□□ -0.07
TROAP-209ENST00000549275 SLC39A6Q13433 755 aa14.6□□□□□ -0.07
TROAP-209ENST00000549275 EIF4A2Q14240 407 aaKnown RBP14.6□□□□□ -0.07
TROAP-209ENST00000549275 SLC9C1Q4G0N8 1177 aa14.6□□□□□ -0.07
TROAP-209ENST00000549275 Q7L0L9 218 aa14.6□□□□□ -0.07
TROAP-209ENST00000549275 ZNF330Q9Y3S2 320 aaPredicted RBP14.6□□□□□ -0.07
TROAP-209ENST00000549275 SHTN1A0MZ66 631 aa14.59□□□□□ -0.07
TROAP-209ENST00000549275 WTIPA6NIX2 430 aaPredicted RBP14.59□□□□□ -0.07
TROAP-209ENST00000549275 RAD17O75943 681 aa14.59□□□□□ -0.07
TROAP-209ENST00000549275 INHBEP58166 350 aa14.59□□□□□ -0.07
TROAP-209ENST00000549275 RTFDC1Q9BY42 306 aaPredicted RBP14.59□□□□□ -0.07
TROAP-209ENST00000549275 RAPGEFL1Q9UHV5 662 aa14.59□□□□□ -0.07
TROAP-209ENST00000549275 ZBTB12Q9Y330 459 aaPredicted RBP14.59□□□□□ -0.07
TROAP-209ENST00000549275 RPTORQ8N122 1335 aa14.59□□□□□ -0.07
TROAP-209ENST00000549275 SLC24A1O60721 1099 aa14.58□□□□□ -0.08
TROAP-209ENST00000549275 ARHGEF6Q15052 776 aa14.58□□□□□ -0.08
TROAP-209ENST00000549275 LRIT3Q3SXY7 679 aa14.58□□□□□ -0.08
TROAP-209ENST00000549275 TBC1D10BQ4KMP7 808 aaPredicted RBP14.58□□□□□ -0.08
TROAP-209ENST00000549275 DZIP3Q86Y13 1208 aaKnown RBP14.58□□□□□ -0.08
TROAP-209ENST00000549275 SYNGAP1Q96PV0 1343 aa14.58□□□□□ -0.08
TROAP-209ENST00000549275 BMP8BP34820 402 aa14.57□□□□□ -0.08
TROAP-209ENST00000549275 L3MBTL2Q969R5 705 aa14.57□□□□□ -0.08
TROAP-209ENST00000549275 PPEF1O14829 653 aaPredicted RBP14.56□□□□□ -0.08
TROAP-209ENST00000549275 RPS12P25398 132 aaKnown RBP14.56□□□□□ -0.08
TROAP-209ENST00000549275 KIAA2012Q0VF49 1180 aa14.56□□□□□ -0.08
TROAP-209ENST00000549275 CD99L2Q8TCZ2 262 aa14.56□□□□□ -0.08
TROAP-209ENST00000549275 RPGRQ92834 1020 aaKnown RBP14.56□□□□□ -0.08
TROAP-209ENST00000549275 CRAMP1Q96RY5 1269 aa14.56□□□□□ -0.08
TROAP-209ENST00000549275 MUC3AQ02505 3323 aa14.55□□□□□ -0.08
TROAP-209ENST00000549275 PRAMEF22A3QJZ6 481 aa14.55□□□□□ -0.08
TROAP-209ENST00000549275 GTF2E1P29083 439 aaPredicted RBP14.55□□□□□ -0.08
TROAP-209ENST00000549275 NKX2-3Q8TAU0 364 aa14.55□□□□□ -0.08
TROAP-209ENST00000549275 GGA3Q9NZ52 723 aa14.55□□□□□ -0.08
TROAP-209ENST00000549275 ARIH1Q9Y4X5 557 aaPredicted RBP14.55□□□□□ -0.08
TROAP-209ENST00000549275 EGFRP00533 1210 aa14.54□□□□□ -0.08
TROAP-209ENST00000549275 UBE2Q1Q7Z7E8 422 aa14.54□□□□□ -0.08
TROAP-209ENST00000549275 STAP2Q9UGK3 403 aa14.54□□□□□ -0.08
TROAP-209ENST00000549275 RIC1Q4ADV7 1423 aa14.54□□□□□ -0.08
TROAP-209ENST00000549275 TTC28Q96AY4 2481 aa14.53□□□□□ -0.08
TROAP-209ENST00000549275 UBE2Q2LH0YL09 131 aa14.53□□□□□ -0.08
TROAP-209ENST00000549275 TNFRSF10AO00220 468 aa14.53□□□□□ -0.08
TROAP-209ENST00000549275 TCIRG1Q13488 830 aa14.53□□□□□ -0.08
TROAP-209ENST00000549275 TTC5Q8N0Z6 440 aa14.53□□□□□ -0.08
TROAP-209ENST00000549275 RBM17Q96I25 401 aaKnown RBP14.53□□□□□ -0.08
TROAP-209ENST00000549275 ZNF496Q96IT1 587 aaPredicted RBP14.53□□□□□ -0.08
TROAP-209ENST00000549275 POLKQ9UBT6 870 aa14.53□□□□□ -0.08
TROAP-209ENST00000549275 NIP7Q9Y221 180 aaKnown RBP eCLIP14.53□□□□□ -0.08
TROAP-209ENST00000549275 MANSC4A6NHS7 340 aaPredicted RBP14.52□□□□□ -0.09
TROAP-209ENST00000549275 SP3Q02447 781 aa14.52□□□□□ -0.09
TROAP-209ENST00000549275 KIF4BQ2VIQ3 1234 aa14.52□□□□□ -0.09
TROAP-209ENST00000549275 RBM26Q5T8P6 1007 aaKnown RBP14.52□□□□□ -0.09
TROAP-209ENST00000549275 IFNL1Q8IU54 200 aa14.52□□□□□ -0.09
TROAP-209ENST00000549275 CARD11Q9BXL7 1154 aa14.52□□□□□ -0.09
TROAP-209ENST00000549275 ATP6V0A2Q9Y487 856 aa14.52□□□□□ -0.09
TROAP-209ENST00000549275 LAMB4A4D0S4 1761 aa14.52□□□□□ -0.09
TROAP-209ENST00000549275 MAP3K12Q12852 859 aa14.51□□□□□ -0.09
TROAP-209ENST00000549275 MKRN3Q13064 507 aaKnown RBP14.51□□□□□ -0.09
TROAP-209ENST00000549275 SHISA4Q96DD7 197 aa14.51□□□□□ -0.09
TROAP-209ENST00000549275 PTCH2Q9Y6C5 1203 aa14.51□□□□□ -0.09
TROAP-209ENST00000549275 YDJCA8MPS7 323 aa14.5□□□□□ -0.09
TROAP-209ENST00000549275 RNMTO43148 476 aaKnown RBP14.5□□□□□ -0.09
TROAP-209ENST00000549275 FAM109BQ6ICB4 259 aaPredicted RBP14.5□□□□□ -0.09
TROAP-209ENST00000549275 MOB2Q70IA6 237 aa14.5□□□□□ -0.09
TROAP-209ENST00000549275 GDF15Q99988 308 aa14.5□□□□□ -0.09
TROAP-209ENST00000549275 NYXQ9GZU5 481 aa14.5□□□□□ -0.09
TROAP-209ENST00000549275 LGR6Q9HBX8 967 aa14.5□□□□□ -0.09
TROAP-209ENST00000549275 KIF20BQ96Q89 1820 aa14.5□□□□□ -0.09
TROAP-209ENST00000549275 HEG1Q9ULI3 1381 aa14.49□□□□□ -0.09
TROAP-209ENST00000549275 TMEM265A0A087WTH1 108 aa14.49□□□□□ -0.09
TROAP-209ENST00000549275 EVI5O60447 810 aa14.49□□□□□ -0.09
TROAP-209ENST00000549275 SPRYD7Q5W111 196 aa14.49□□□□□ -0.09
TROAP-209ENST00000549275 DPP8Q6V1X1 898 aaPredicted RBP14.49□□□□□ -0.09
TROAP-209ENST00000549275 NECTIN2Q92692 538 aa14.49□□□□□ -0.09
TROAP-209ENST00000549275 KDM3BQ7LBC6 1761 aa14.49□□□□□ -0.09
TROAP-209ENST00000549275 POLR2AP24928 1970 aaKnown RBP14.49□□□□□ -0.09
TROAP-209ENST00000549275 PSMD14O00487 310 aa14.48□□□□□ -0.09
TROAP-209ENST00000549275 TCERG1O14776 1098 aaKnown RBP14.48□□□□□ -0.09
TROAP-209ENST00000549275 A1BGP04217 495 aa14.48□□□□□ -0.09
TROAP-209ENST00000549275 OTUD7BQ6GQQ9 843 aa14.48□□□□□ -0.09
TROAP-209ENST00000549275 FAM177BA6PVY3 158 aa14.47□□□□□ -0.09
TROAP-209ENST00000549275 TTLL12Q14166 644 aaPredicted RBP14.47□□□□□ -0.09
TROAP-209ENST00000549275 ANGEL2Q5VTE6 544 aaKnown RBP14.47□□□□□ -0.09
TROAP-209ENST00000549275 UBR2Q8IWV8 1755 aa14.47□□□□□ -0.09
TROAP-209ENST00000549275 MYCP01106 439 aaPredicted RBP14.46□□□□□ -0.09
TROAP-209ENST00000549275 NF2P35240 595 aa14.46□□□□□ -0.09
TROAP-209ENST00000549275 TNNT2P45379 298 aaPredicted RBP14.46□□□□□ -0.09
TROAP-209ENST00000549275 GJA8P48165 433 aa14.46□□□□□ -0.09
TROAP-209ENST00000549275 GUCD1Q96NT3 240 aa14.46□□□□□ -0.09
TROAP-209ENST00000549275 ABCC12Q96J65 1359 aa14.46□□□□□ -0.1
TROAP-209ENST00000549275 BCAMP50895 628 aa14.45□□□□□ -0.1
TROAP-209ENST00000549275 CRHR2Q13324 411 aa14.45□□□□□ -0.1
TROAP-209ENST00000549275 TDHQ8IZJ6 230 aa14.45□□□□□ -0.1
TROAP-209ENST00000549275 TESK2Q96S53 571 aa14.45□□□□□ -0.1
TROAP-209ENST00000549275 ASTN2O75129 1339 aaPredicted RBP14.44□□□□□ -0.1
TROAP-209ENST00000549275 CACNA1AO00555 2505 aa14.44□□□□□ -0.1
TROAP-209ENST00000549275 IGF2BP3O00425 579 aaKnown RBP eCLIP14.44□□□□□ -0.1
TROAP-209ENST00000549275 ZBTB48P10074 688 aaPredicted RBP14.44□□□□□ -0.1
TROAP-209ENST00000549275 CAPN2P17655 700 aa14.44□□□□□ -0.1
TROAP-209ENST00000549275 ARMC9Q7Z3E5 817 aa14.44□□□□□ -0.1
TROAP-209ENST00000549275 SLC51AQ86UW1 340 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms