RNA–Protein interactions for RNA: ENST00000548913.1

C12orf54-204, Transcript of chromosome 12 open reading frame 54, humanhuman

TSL 5

Gene C12orf54, Length 693 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf54-204ENST00000548913 SLC51AQ86UW1 340 aa11.8□□□□□ -0.52
C12orf54-204ENST00000548913 NLGN2Q8NFZ4 835 aa11.8□□□□□ -0.52
C12orf54-204ENST00000548913 NLRP3Q96P20 1036 aa11.8□□□□□ -0.52
C12orf54-204ENST00000548913 CCDC85AQ96PX6 553 aaPredicted RBP11.8□□□□□ -0.52
C12orf54-204ENST00000548913 FHDC1Q9C0D6 1143 aaPredicted RBP11.8□□□□□ -0.52
C12orf54-204ENST00000548913 GREM2Q9H772 168 aa11.8□□□□□ -0.52
C12orf54-204ENST00000548913 CD2APQ9Y5K6 639 aa11.8□□□□□ -0.52
C12orf54-204ENST00000548913 PNMA6EA0A0J9YXQ4 647 aa11.79□□□□□ -0.52
C12orf54-204ENST00000548913 SRGNP10124 158 aa11.79□□□□□ -0.52
C12orf54-204ENST00000548913 KCNA3P22001 575 aa11.79□□□□□ -0.52
C12orf54-204ENST00000548913 HOXA10P31260 410 aaPredicted RBP11.79□□□□□ -0.52
C12orf54-204ENST00000548913 RFX5P48382 616 aaPredicted RBP11.79□□□□□ -0.52
C12orf54-204ENST00000548913 CEP85Q6P2H3 762 aa11.79□□□□□ -0.52
C12orf54-204ENST00000548913 C2CD5Q86YS7 1000 aa11.79□□□□□ -0.52
C12orf54-204ENST00000548913 SEC31BQ9NQW1 1179 aa11.79□□□□□ -0.52
C12orf54-204ENST00000548913 DPEP1P16444 411 aa11.78□□□□□ -0.52
C12orf54-204ENST00000548913 PDE6BP35913 854 aa11.78□□□□□ -0.52
C12orf54-204ENST00000548913 SIRT2Q8IXJ6 389 aa11.78□□□□□ -0.52
C12orf54-204ENST00000548913 PCDHB15Q9Y5E8 787 aa11.78□□□□□ -0.52
C12orf54-204ENST00000548913 HSP90B1P14625 803 aaKnown RBP11.77□□□□□ -0.53
C12orf54-204ENST00000548913 ITGA6P23229 1130 aa11.77□□□□□ -0.53
C12orf54-204ENST00000548913 TGFB2P61812 414 aa11.77□□□□□ -0.53
C12orf54-204ENST00000548913 CCDC152Q4G0S7 254 aa11.77□□□□□ -0.53
C12orf54-204ENST00000548913 KLHL34Q8N239 644 aa11.77□□□□□ -0.53
C12orf54-204ENST00000548913 CELF1Q92879 486 aaKnown RBP11.77□□□□□ -0.53
C12orf54-204ENST00000548913 SNED1Q8TER0 1413 aa11.77□□□□□ -0.53
C12orf54-204ENST00000548913 A0A0G2JLW4 131 aa11.76□□□□□ -0.53
C12orf54-204ENST00000548913 NPR1P16066 1061 aa11.76□□□□□ -0.53
C12orf54-204ENST00000548913 POLA2Q14181 598 aa11.76□□□□□ -0.53
C12orf54-204ENST00000548913 STYK1Q6J9G0 422 aa11.76□□□□□ -0.53
C12orf54-204ENST00000548913 KLHDC4Q8TBB5 520 aa11.76□□□□□ -0.53
C12orf54-204ENST00000548913 SSH3Q8TE77 659 aa11.76□□□□□ -0.53
C12orf54-204ENST00000548913 MASTLQ96GX5 879 aa11.76□□□□□ -0.53
C12orf54-204ENST00000548913 CRAMP1Q96RY5 1269 aa11.76□□□□□ -0.53
C12orf54-204ENST00000548913 SYT17Q9BSW7 474 aa11.76□□□□□ -0.53
C12orf54-204ENST00000548913 CHMP4BQ9H444 224 aaKnown RBP11.76□□□□□ -0.53
C12orf54-204ENST00000548913 PPP1R1BQ9UD71 204 aaPredicted RBP11.76□□□□□ -0.53
C12orf54-204ENST00000548913 PDZRN3Q9UPQ7 1066 aa11.76□□□□□ -0.53
C12orf54-204ENST00000548913 LRRC37AA6NMS7 1700 aa11.76□□□□□ -0.53
C12orf54-204ENST00000548913 BRCA1P38398 1863 aaKnown RBP11.76□□□□□ -0.53
C12orf54-204ENST00000548913 MYH3P11055 1940 aa11.76□□□□□ -0.53
C12orf54-204ENST00000548913 H0YIN7 160 aa11.75□□□□□ -0.53
C12orf54-204ENST00000548913 ATP8B2P98198 1209 aa11.75□□□□□ -0.53
C12orf54-204ENST00000548913 PTPN12Q05209 780 aaKnown RBP11.75□□□□□ -0.53
C12orf54-204ENST00000548913 GRAPQ13588 217 aa11.75□□□□□ -0.53
C12orf54-204ENST00000548913 GRAPLQ8TC17 118 aaPredicted RBP11.75□□□□□ -0.53
C12orf54-204ENST00000548913 RPGRQ92834 1020 aaKnown RBP11.75□□□□□ -0.53
C12orf54-204ENST00000548913 ZNF594Q96JF6 807 aaPredicted RBP11.75□□□□□ -0.53
C12orf54-204ENST00000548913 HDAC5Q9UQL6 1122 aa11.75□□□□□ -0.53
C12orf54-204ENST00000548913 CHMP3Q9Y3E7 222 aa11.75□□□□□ -0.53
C12orf54-204ENST00000548913 SRGAP3O43295 1099 aa11.74□□□□□ -0.53
C12orf54-204ENST00000548913 AAMPQ13685 434 aa11.74□□□□□ -0.53
C12orf54-204ENST00000548913 DDX46Q7L014 1031 aaKnown RBP11.74□□□□□ -0.53
C12orf54-204ENST00000548913 RPAP2Q8IXW5 612 aaPredicted RBP11.74□□□□□ -0.53
C12orf54-204ENST00000548913 PA2G4Q9UQ80 394 aaKnown RBP11.74□□□□□ -0.53
C12orf54-204ENST00000548913 ANKRD18BA2A2Z9 1011 aa11.73□□□□□ -0.53
C12orf54-204ENST00000548913 IFIT5Q13325 482 aaKnown RBP11.73□□□□□ -0.53
C12orf54-204ENST00000548913 CCDC57Q2TAC2 916 aa11.73□□□□□ -0.53
C12orf54-204ENST00000548913 PRPF40BQ6NWY9 871 aaKnown RBP11.73□□□□□ -0.53
C12orf54-204ENST00000548913 C7orf43Q8WVR3 580 aa11.73□□□□□ -0.53
C12orf54-204ENST00000548913 ZNF622Q969S3 477 aaKnown RBP eCLIP11.73□□□□□ -0.53
C12orf54-204ENST00000548913 RBM17Q96I25 401 aaKnown RBP11.73□□□□□ -0.53
C12orf54-204ENST00000548913 PUS3Q9BZE2 481 aaKnown RBP11.73□□□□□ -0.53
C12orf54-204ENST00000548913 COPRSQ9NQ92 184 aa11.73□□□□□ -0.53
C12orf54-204ENST00000548913 DUOX1Q9NRD9 1551 aa11.73□□□□□ -0.53
C12orf54-204ENST00000548913 WWC3Q9ULE0 1092 aa11.73□□□□□ -0.53
C12orf54-204ENST00000548913 TAF1P21675 1872 aa11.72□□□□□ -0.53
C12orf54-204ENST00000548913 LTBP1Q14766 1721 aa11.72□□□□□ -0.53
C12orf54-204ENST00000548913 NEFLP07196 543 aa11.72□□□□□ -0.53
C12orf54-204ENST00000548913 LRRC24Q50LG9 513 aa11.72□□□□□ -0.53
C12orf54-204ENST00000548913 OLFM4Q6UX06 510 aa11.72□□□□□ -0.53
C12orf54-204ENST00000548913 CNKSR1Q969H4 720 aa11.72□□□□□ -0.53
C12orf54-204ENST00000548913 CDC5LQ99459 802 aaKnown RBP11.72□□□□□ -0.53
C12orf54-204ENST00000548913 EYA2O00167 538 aa11.71□□□□□ -0.53
C12orf54-204ENST00000548913 PPEF1O14829 653 aaPredicted RBP11.71□□□□□ -0.53
C12orf54-204ENST00000548913 RPS8P62241 208 aaKnown RBP11.71□□□□□ -0.53
C12orf54-204ENST00000548913 ATG9AQ7Z3C6 839 aa11.71□□□□□ -0.53
C12orf54-204ENST00000548913 ANKRD18AQ8IVF6 992 aa11.71□□□□□ -0.53
C12orf54-204ENST00000548913 TTLL6Q8N841 843 aa11.71□□□□□ -0.53
C12orf54-204ENST00000548913 PIM2Q9P1W9 311 aa11.71□□□□□ -0.53
C12orf54-204ENST00000548913 NOP58Q9Y2X3 529 aaKnown RBP11.71□□□□□ -0.53
C12orf54-204ENST00000548913 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.71□□□□□ -0.53
C12orf54-204ENST00000548913 SLX4Q8IY92 1834 aa11.71□□□□□ -0.54
C12orf54-204ENST00000548913 A0A1B0GUL6 1792 aa11.71□□□□□ -0.54
C12orf54-204ENST00000548913 SPEF2Q9C093 1822 aa11.7□□□□□ -0.54
C12orf54-204ENST00000548913 ALDH1B1P30837 517 aa11.7□□□□□ -0.54
C12orf54-204ENST00000548913 HDAC1Q13547 482 aaPredicted RBP11.7□□□□□ -0.54
C12orf54-204ENST00000548913 VGLL2Q8N8G2 317 aa11.7□□□□□ -0.54
C12orf54-204ENST00000548913 SIL1Q9H173 461 aa11.7□□□□□ -0.54
C12orf54-204ENST00000548913 BSDC1Q9NW68 430 aaPredicted RBP11.7□□□□□ -0.54
C12orf54-204ENST00000548913 ATP6V0A2Q9Y487 856 aa11.7□□□□□ -0.54
C12orf54-204ENST00000548913 RIPOR2Q9Y4F9 1068 aa11.7□□□□□ -0.54
C12orf54-204ENST00000548913 CACNA1SQ13698 1873 aa11.7□□□□□ -0.54
C12orf54-204ENST00000548913 HMMRO75330 724 aa11.69□□□□□ -0.54
C12orf54-204ENST00000548913 BBOX1O75936 387 aa11.69□□□□□ -0.54
C12orf54-204ENST00000548913 CIAO1O76071 339 aa11.69□□□□□ -0.54
C12orf54-204ENST00000548913 IGHDP01880 384 aa11.69□□□□□ -0.54
C12orf54-204ENST00000548913 IGHMBP2P38935 993 aaKnown RBP11.69□□□□□ -0.54
C12orf54-204ENST00000548913 DALRD3Q5D0E6 543 aaKnown RBP11.69□□□□□ -0.54
C12orf54-204ENST00000548913 TAF7LQ5H9L4 462 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms