RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 CDC37L1Q7L3B6 337 aa17.93■□□□□ 0.46
CDX2-202ENST00000548877 LAMB2P55268 1798 aa17.93■□□□□ 0.46
CDX2-202ENST00000548877 ABCC4O15439 1325 aa17.93■□□□□ 0.46
CDX2-202ENST00000548877 TCERG1O14776 1098 aaKnown RBP17.92■□□□□ 0.46
CDX2-202ENST00000548877 NOGQ13253 232 aa17.92■□□□□ 0.46
CDX2-202ENST00000548877 TNIP1Q15025 636 aa17.92■□□□□ 0.46
CDX2-202ENST00000548877 UTP14AQ9BVJ6 771 aaKnown RBP17.92■□□□□ 0.46
CDX2-202ENST00000548877 PDIA6Q15084 440 aa17.91■□□□□ 0.46
CDX2-202ENST00000548877 DPP8Q6V1X1 898 aaPredicted RBP17.91■□□□□ 0.46
CDX2-202ENST00000548877 PLEKHF1Q96S99 279 aa17.91■□□□□ 0.46
CDX2-202ENST00000548877 MPNDQ8N594 471 aa17.9■□□□□ 0.46
CDX2-202ENST00000548877 NFE2L2Q16236 605 aa17.89■□□□□ 0.45
CDX2-202ENST00000548877 TRPM4Q8TD43 1214 aa17.89■□□□□ 0.45
CDX2-202ENST00000548877 CNOT7Q9UIV1 285 aaKnown RBP17.89■□□□□ 0.45
CDX2-202ENST00000548877 PDE4DIPQ5VU43 2346 aa17.89■□□□□ 0.45
CDX2-202ENST00000548877 LRRC37AA6NMS7 1700 aa17.89■□□□□ 0.45
CDX2-202ENST00000548877 DUOX1Q9NRD9 1551 aa17.88■□□□□ 0.45
CDX2-202ENST00000548877 YDJCA8MPS7 323 aa17.88■□□□□ 0.45
CDX2-202ENST00000548877 NEFMP07197 916 aa17.88■□□□□ 0.45
CDX2-202ENST00000548877 DGKZQ13574 1117 aa17.88■□□□□ 0.45
CDX2-202ENST00000548877 TMC4Q7Z404 712 aa17.88■□□□□ 0.45
CDX2-202ENST00000548877 DPF2Q92785 391 aa17.88■□□□□ 0.45
CDX2-202ENST00000548877 BCL2L13Q9BXK5 485 aa17.88■□□□□ 0.45
CDX2-202ENST00000548877 POLR2AP24928 1970 aaKnown RBP17.88■□□□□ 0.45
CDX2-202ENST00000548877 H7C1D1 291 aa17.87■□□□□ 0.45
CDX2-202ENST00000548877 RAD17O75943 681 aa17.87■□□□□ 0.45
CDX2-202ENST00000548877 ZIC5Q96T25 663 aa17.87■□□□□ 0.45
CDX2-202ENST00000548877 SAGE1Q9NXZ1 904 aa17.87■□□□□ 0.45
CDX2-202ENST00000548877 FAM155AB1AL88 458 aaPredicted RBP17.86■□□□□ 0.45
CDX2-202ENST00000548877 GRAPQ13588 217 aa17.86■□□□□ 0.45
CDX2-202ENST00000548877 HSP90AB3PQ58FF7 597 aa17.86■□□□□ 0.45
CDX2-202ENST00000548877 NLRP10Q86W26 655 aa17.86■□□□□ 0.45
CDX2-202ENST00000548877 GRAPLQ8TC17 118 aaPredicted RBP17.86■□□□□ 0.45
CDX2-202ENST00000548877 BABAM1Q9NWV8 329 aa17.86■□□□□ 0.45
CDX2-202ENST00000548877 TAF1P21675 1872 aa17.85■□□□□ 0.45
CDX2-202ENST00000548877 HUNKP57058 714 aa17.85■□□□□ 0.45
CDX2-202ENST00000548877 DDX46Q7L014 1031 aaKnown RBP17.85■□□□□ 0.45
CDX2-202ENST00000548877 USP48Q86UV5 1035 aa17.85■□□□□ 0.45
CDX2-202ENST00000548877 THUMPD2Q9BTF0 503 aaKnown RBP17.85■□□□□ 0.45
CDX2-202ENST00000548877 ZNF408Q9H9D4 720 aa17.85■□□□□ 0.45
CDX2-202ENST00000548877 SHTN1A0MZ66 631 aa17.84■□□□□ 0.45
CDX2-202ENST00000548877 RGMBQ6NW40 437 aa17.84■□□□□ 0.45
CDX2-202ENST00000548877 MICALL2Q8IY33 904 aa17.84■□□□□ 0.45
CDX2-202ENST00000548877 SH3TC1Q8TE82 1336 aa17.83■□□□□ 0.44
CDX2-202ENST00000548877 AKAP11Q9UKA4 1901 aa17.83■□□□□ 0.44
CDX2-202ENST00000548877 HCLS1P14317 486 aaPredicted RBP17.83■□□□□ 0.44
CDX2-202ENST00000548877 TCIRG1Q13488 830 aa17.83■□□□□ 0.44
CDX2-202ENST00000548877 PROSER3Q2NL68 480 aa17.83■□□□□ 0.44
CDX2-202ENST00000548877 CCDC102AQ96A19 550 aa17.83■□□□□ 0.44
CDX2-202ENST00000548877 PNNQ9H307 717 aaKnown RBP17.83■□□□□ 0.44
CDX2-202ENST00000548877 RPS12P25398 132 aaKnown RBP17.82■□□□□ 0.44
CDX2-202ENST00000548877 CFAP44Q96MT7 982 aa17.82■□□□□ 0.44
CDX2-202ENST00000548877 GBA2Q9HCG7 927 aaPredicted RBP17.82■□□□□ 0.44
CDX2-202ENST00000548877 TSPYL4Q9UJ04 414 aa17.82■□□□□ 0.44
CDX2-202ENST00000548877 SAMD7Q7Z3H4 446 aa17.81■□□□□ 0.44
CDX2-202ENST00000548877 ZBTB12Q9Y330 459 aaPredicted RBP17.81■□□□□ 0.44
CDX2-202ENST00000548877 DDX60Q8IY21 1712 aaKnown RBP17.81■□□□□ 0.44
CDX2-202ENST00000548877 PSMD14O00487 310 aa17.8■□□□□ 0.44
CDX2-202ENST00000548877 EIF2S2P20042 333 aaKnown RBP17.8■□□□□ 0.44
CDX2-202ENST00000548877 SF3B3Q15393 1217 aaKnown RBP17.8■□□□□ 0.44
CDX2-202ENST00000548877 COPS6Q7L5N1 327 aa17.8■□□□□ 0.44
CDX2-202ENST00000548877 KRT26Q7Z3Y9 468 aa17.8■□□□□ 0.44
CDX2-202ENST00000548877 C2orf69Q8N8R5 385 aa17.8■□□□□ 0.44
CDX2-202ENST00000548877 TRMT112Q9UI30 125 aaKnown RBP17.8■□□□□ 0.44
CDX2-202ENST00000548877 EGFRP00533 1210 aa17.79■□□□□ 0.44
CDX2-202ENST00000548877 ANXA1P04083 346 aa17.79■□□□□ 0.44
CDX2-202ENST00000548877 KIF23Q02241 960 aaPredicted RBP17.79■□□□□ 0.44
CDX2-202ENST00000548877 WASHC4Q2M389 1173 aa17.79■□□□□ 0.44
CDX2-202ENST00000548877 DLK2Q6UY11 383 aa17.79■□□□□ 0.44
CDX2-202ENST00000548877 XAGE3Q8WTP9 111 aa17.79■□□□□ 0.44
CDX2-202ENST00000548877 RNF186Q9NXI6 227 aa17.79■□□□□ 0.44
CDX2-202ENST00000548877 REM2Q8IYK8 340 aaPredicted RBP17.78■□□□□ 0.44
CDX2-202ENST00000548877 ZNF609O15014 1411 aa17.78■□□□□ 0.44
CDX2-202ENST00000548877 MAPK8IP3Q9UPT6 1336 aa17.77■□□□□ 0.44
CDX2-202ENST00000548877 SLC10A3P09131 477 aa17.77■□□□□ 0.44
CDX2-202ENST00000548877 TBC1D10BQ4KMP7 808 aaPredicted RBP17.77■□□□□ 0.44
CDX2-202ENST00000548877 DCPSQ96C86 337 aaKnown RBP17.77■□□□□ 0.44
CDX2-202ENST00000548877 POLLQ9UGP5 575 aa17.77■□□□□ 0.44
CDX2-202ENST00000548877 RTL9Q8NET4 1388 aa17.77■□□□□ 0.43
CDX2-202ENST00000548877 ZNF157P51786 506 aaPredicted RBP17.76■□□□□ 0.43
CDX2-202ENST00000548877 CELF1Q92879 486 aaKnown RBP17.76■□□□□ 0.43
CDX2-202ENST00000548877 CSRNP1Q96S65 589 aa17.76■□□□□ 0.43
CDX2-202ENST00000548877 DBNDD1Q9H9R9 158 aa17.76■□□□□ 0.43
CDX2-202ENST00000548877 NSFL1CQ9UNZ2 370 aaKnown RBP17.76■□□□□ 0.43
CDX2-202ENST00000548877 SCN9AQ15858 1988 aa17.76■□□□□ 0.43
CDX2-202ENST00000548877 ADM5C9JUS6 153 aa17.75■□□□□ 0.43
CDX2-202ENST00000548877 TRPA1O75762 1119 aa17.75■□□□□ 0.43
CDX2-202ENST00000548877 VIL1P09327 827 aaKnown RBP17.75■□□□□ 0.43
CDX2-202ENST00000548877 EYA3Q99504 573 aa17.75■□□□□ 0.43
CDX2-202ENST00000548877 ISCA1Q9BUE6 129 aa17.75■□□□□ 0.43
CDX2-202ENST00000548877 ECE2O60344 883 aa17.74■□□□□ 0.43
CDX2-202ENST00000548877 GPSM2P81274 684 aa17.74■□□□□ 0.43
CDX2-202ENST00000548877 AIMP1Q12904 312 aaKnown RBP17.74■□□□□ 0.43
CDX2-202ENST00000548877 CTU1Q7Z7A3 348 aaKnown RBP17.74■□□□□ 0.43
CDX2-202ENST00000548877 KCNQ5Q9NR82 932 aa17.74■□□□□ 0.43
CDX2-202ENST00000548877 COL4A1P02462 1669 aa17.74■□□□□ 0.43
CDX2-202ENST00000548877 PSME4Q14997 1843 aa17.73■□□□□ 0.43
CDX2-202ENST00000548877 C6orf229H3BNL8 230 aa17.73■□□□□ 0.43
CDX2-202ENST00000548877 RIPK4P57078 832 aa17.73■□□□□ 0.43
CDX2-202ENST00000548877 TRIM28Q13263 835 aaKnown RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms