RNA–Protein interactions for RNA: ENST00000548863.1

CNOT2-215, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-215ENST00000548863 MSL1Q68DK7 614 aa9.95□□□□□ -0.82
CNOT2-215ENST00000548863 FAM35AQ86V20 835 aa9.95□□□□□ -0.82
CNOT2-215ENST00000548863 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.95□□□□□ -0.82
CNOT2-215ENST00000548863 ZFATQ9P243 1243 aa9.95□□□□□ -0.82
CNOT2-215ENST00000548863 LGR5O75473 907 aa9.94□□□□□ -0.82
CNOT2-215ENST00000548863 MICAL2O94851 1124 aa9.94□□□□□ -0.82
CNOT2-215ENST00000548863 EGFRP00533 1210 aa9.94□□□□□ -0.82
CNOT2-215ENST00000548863 FOXD4L6Q3SYB3 417 aaPredicted RBP9.94□□□□□ -0.82
CNOT2-215ENST00000548863 CFAP70Q5T0N1 1121 aa9.94□□□□□ -0.82
CNOT2-215ENST00000548863 FOXD4L3Q6VB84 417 aaPredicted RBP9.94□□□□□ -0.82
CNOT2-215ENST00000548863 DHX32Q7L7V1 743 aaKnown RBP9.94□□□□□ -0.82
CNOT2-215ENST00000548863 DMRTC2Q8IXT2 367 aaPredicted RBP9.94□□□□□ -0.82
CNOT2-215ENST00000548863 LPIN3Q9BQK8 851 aa9.94□□□□□ -0.82
CNOT2-215ENST00000548863 ZBTB42B2RXF5 422 aa9.93□□□□□ -0.82
CNOT2-215ENST00000548863 TARSP26639 723 aaKnown RBP9.93□□□□□ -0.82
CNOT2-215ENST00000548863 GPLD1P80108 840 aa9.93□□□□□ -0.82
CNOT2-215ENST00000548863 PRSS36Q5K4E3 855 aa9.93□□□□□ -0.82
CNOT2-215ENST00000548863 SHISA2Q6UWI4 295 aa9.93□□□□□ -0.82
CNOT2-215ENST00000548863 IFT43Q96FT9 208 aa9.93□□□□□ -0.82
CNOT2-215ENST00000548863 SSBP4Q9BWG4 385 aaPredicted RBP9.93□□□□□ -0.82
CNOT2-215ENST00000548863 OPLAHO14841 1288 aa9.92□□□□□ -0.82
CNOT2-215ENST00000548863 PERM1Q5SV97 790 aa9.92□□□□□ -0.82
CNOT2-215ENST00000548863 FBXO11Q86XK2 927 aa9.92□□□□□ -0.82
CNOT2-215ENST00000548863 FAM200AQ8TCP9 573 aa9.92□□□□□ -0.82
CNOT2-215ENST00000548863 ARID4AP29374 1257 aaPredicted RBP9.91□□□□□ -0.82
CNOT2-215ENST00000548863 VTI1AQ96AJ9 217 aa9.91□□□□□ -0.82
CNOT2-215ENST00000548863 KRTAP4-8Q9BYQ9 185 aa9.91□□□□□ -0.82
CNOT2-215ENST00000548863 RARAP10276 462 aa9.9□□□□□ -0.82
CNOT2-215ENST00000548863 CPB1P15086 417 aa9.9□□□□□ -0.82
CNOT2-215ENST00000548863 NRLP54845 237 aa9.9□□□□□ -0.82
CNOT2-215ENST00000548863 LRFN2Q9ULH4 789 aa9.9□□□□□ -0.82
CNOT2-215ENST00000548863 SASH3O75995 380 aa9.89□□□□□ -0.83
CNOT2-215ENST00000548863 ARTNQ5T4W7 220 aa9.89□□□□□ -0.83
CNOT2-215ENST00000548863 ELMSAN1Q6PJG2 1045 aa9.89□□□□□ -0.83
CNOT2-215ENST00000548863 RTCBQ9Y3I0 505 aaKnown RBP9.89□□□□□ -0.83
CNOT2-215ENST00000548863 SWI5Q1ZZU3 235 aa9.88□□□□□ -0.83
CNOT2-215ENST00000548863 IGF2-ASQ6U949 168 aa9.88□□□□□ -0.83
CNOT2-215ENST00000548863 KRT25Q7Z3Z0 450 aa9.88□□□□□ -0.83
CNOT2-215ENST00000548863 TLR7Q9NYK1 1049 aaKnown RBP9.88□□□□□ -0.83
CNOT2-215ENST00000548863 USP21Q9UK80 565 aa9.88□□□□□ -0.83
CNOT2-215ENST00000548863 WFDC8Q8IUA0 241 aa9.87□□□□□ -0.83
CNOT2-215ENST00000548863 HOXD8P13378 290 aaPredicted RBP9.86□□□□□ -0.83
CNOT2-215ENST00000548863 TP53INP1Q96A56 240 aa9.86□□□□□ -0.83
CNOT2-215ENST00000548863 ZFP64Q9NPA5 681 aa9.86□□□□□ -0.83
CNOT2-215ENST00000548863 SCO2A0A1W2PP80 73 aa9.85□□□□□ -0.83
CNOT2-215ENST00000548863 RFX1P22670 979 aa9.85□□□□□ -0.83
CNOT2-215ENST00000548863 PLAURQ03405 335 aa9.85□□□□□ -0.83
CNOT2-215ENST00000548863 ELOAQ14241 798 aaKnown RBP9.85□□□□□ -0.83
CNOT2-215ENST00000548863 TREML1Q86YW5 311 aa9.85□□□□□ -0.83
CNOT2-215ENST00000548863 ACIN1Q9UKV3 1341 aaKnown RBP9.84□□□□□ -0.83
CNOT2-215ENST00000548863 XYLBO75191 536 aa9.84□□□□□ -0.83
CNOT2-215ENST00000548863 SOX18P35713 384 aa9.84□□□□□ -0.83
CNOT2-215ENST00000548863 FKBP5Q13451 457 aaPredicted RBP9.84□□□□□ -0.83
CNOT2-215ENST00000548863 COX20Q5RI15 118 aa9.84□□□□□ -0.83
CNOT2-215ENST00000548863 WFDC12Q8WWY7 111 aa9.84□□□□□ -0.83
CNOT2-215ENST00000548863 COL26A1Q96A83 441 aa9.84□□□□□ -0.83
CNOT2-215ENST00000548863 SMG9Q9H0W8 520 aaKnown RBP9.84□□□□□ -0.83
CNOT2-215ENST00000548863 NOVA2Q9UNW9 492 aaKnown RBP9.84□□□□□ -0.83
CNOT2-215ENST00000548863 KCNMB2Q9Y691 235 aa9.84□□□□□ -0.83
CNOT2-215ENST00000548863 DEAF1O75398 565 aaPredicted RBP9.83□□□□□ -0.84
CNOT2-215ENST00000548863 MLLT1Q03111 559 aaPredicted RBP9.83□□□□□ -0.84
CNOT2-215ENST00000548863 PSMG3-AS1Q96PY0 264 aa9.83□□□□□ -0.84
CNOT2-215ENST00000548863 LOC102724428A0A0B4J2F2 783 aa9.82□□□□□ -0.84
CNOT2-215ENST00000548863 DLL1O00548 723 aa9.82□□□□□ -0.84
CNOT2-215ENST00000548863 SIK1P57059 783 aa9.82□□□□□ -0.84
CNOT2-215ENST00000548863 OCLNQ16625 522 aa9.82□□□□□ -0.84
CNOT2-215ENST00000548863 ZNF777Q9ULD5 760 aaPredicted RBP9.82□□□□□ -0.84
CNOT2-215ENST00000548863 NOS3P29474 1203 aa9.81□□□□□ -0.84
CNOT2-215ENST00000548863 FAM69CQ0P6D2 419 aa9.81□□□□□ -0.84
CNOT2-215ENST00000548863 RGL4Q8IZJ4 473 aa9.81□□□□□ -0.84
CNOT2-215ENST00000548863 CMTR1Q8N1G2 835 aaKnown RBP9.81□□□□□ -0.84
CNOT2-215ENST00000548863 SRA1Q9HD15 236 aaKnown RBP9.81□□□□□ -0.84
CNOT2-215ENST00000548863 USP20Q9Y2K6 914 aa9.81□□□□□ -0.84
CNOT2-215ENST00000548863 MMP20O60882 483 aa9.8□□□□□ -0.84
CNOT2-215ENST00000548863 PSAPP07602 524 aa9.8□□□□□ -0.84
CNOT2-215ENST00000548863 EIF2AK2P19525 551 aaKnown RBP9.8□□□□□ -0.84
CNOT2-215ENST00000548863 IREB2P48200 963 aaKnown RBP9.8□□□□□ -0.84
CNOT2-215ENST00000548863 LRP8Q14114 963 aa9.8□□□□□ -0.84
CNOT2-215ENST00000548863 HFE2Q6ZVN8 426 aa9.8□□□□□ -0.84
CNOT2-215ENST00000548863 TMEM130Q8N3G9 435 aa9.8□□□□□ -0.84
CNOT2-215ENST00000548863 PLD4Q96BZ4 506 aa9.8□□□□□ -0.84
CNOT2-215ENST00000548863 BRD2P25440 801 aaKnown RBP9.79□□□□□ -0.84
CNOT2-215ENST00000548863 CACTIN-AS1Q8N1I8 211 aa9.79□□□□□ -0.84
CNOT2-215ENST00000548863 ZMIZ1Q9ULJ6 1067 aa9.79□□□□□ -0.84
CNOT2-215ENST00000548863 SRPK2P78362 688 aaKnown RBP9.78□□□□□ -0.84
CNOT2-215ENST00000548863 CDCA8Q53HL2 280 aa9.78□□□□□ -0.84
CNOT2-215ENST00000548863 C16orf46Q6P387 395 aa9.78□□□□□ -0.84
CNOT2-215ENST00000548863 SLC51AQ86UW1 340 aa9.78□□□□□ -0.84
CNOT2-215ENST00000548863 MAP4K3Q8IVH8 894 aa9.78□□□□□ -0.84
CNOT2-215ENST00000548863 ETFBKMTQ8IXQ9 262 aa9.78□□□□□ -0.84
CNOT2-215ENST00000548863 DZIP1LQ8IYY4 767 aaKnown RBP9.78□□□□□ -0.84
CNOT2-215ENST00000548863 DCAF11Q8TEB1 546 aa9.78□□□□□ -0.84
CNOT2-215ENST00000548863 PRIMPOLQ96LW4 560 aa9.78□□□□□ -0.84
CNOT2-215ENST00000548863 NLRP13Q86W25 1043 aa9.77□□□□□ -0.85
CNOT2-215ENST00000548863 RBSNQ9H1K0 784 aa9.77□□□□□ -0.85
CNOT2-215ENST00000548863 J3QW42 95 aa9.76□□□□□ -0.85
CNOT2-215ENST00000548863 GHRHP01286 108 aa9.76□□□□□ -0.85
CNOT2-215ENST00000548863 MEGF10Q96KG7 1140 aa9.76□□□□□ -0.85
CNOT2-215ENST00000548863 MRPL18Q9H0U6 180 aaKnown RBP9.76□□□□□ -0.85
CNOT2-215ENST00000548863 PRMT3O60678 531 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms