RNA–Protein interactions for RNA: ENST00000548498.5

SLC48A1-206, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 618 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-206ENST00000548498 SHTN1A0MZ66 631 aa12.86□□□□□ -0.35
SLC48A1-206ENST00000548498 ERVV-1B6SEH8 477 aa12.86□□□□□ -0.35
SLC48A1-206ENST00000548498 HIRAP54198 1017 aaPredicted RBP12.86□□□□□ -0.35
SLC48A1-206ENST00000548498 GRIPAP1Q4V328 841 aa12.86□□□□□ -0.35
SLC48A1-206ENST00000548498 DLK2Q6UY11 383 aa12.86□□□□□ -0.35
SLC48A1-206ENST00000548498 RBM17Q96I25 401 aaKnown RBP12.86□□□□□ -0.35
SLC48A1-206ENST00000548498 PRKRIP1Q9H875 184 aaPredicted RBP12.86□□□□□ -0.35
SLC48A1-206ENST00000548498 ABCC4O15439 1325 aa12.86□□□□□ -0.35
SLC48A1-206ENST00000548498 MYL6BP14649 208 aa12.85□□□□□ -0.35
SLC48A1-206ENST00000548498 NFE2L2Q16236 605 aa12.85□□□□□ -0.35
SLC48A1-206ENST00000548498 KIF6Q6ZMV9 814 aa12.85□□□□□ -0.35
SLC48A1-206ENST00000548498 PGAP2Q9UHJ9 254 aa12.85□□□□□ -0.35
SLC48A1-206ENST00000548498 ZNRF3Q9ULT6 936 aa12.85□□□□□ -0.35
SLC48A1-206ENST00000548498 CDHR2Q9BYE9 1310 aa12.85□□□□□ -0.35
SLC48A1-206ENST00000548498 SOX10P56693 466 aa12.84□□□□□ -0.35
SLC48A1-206ENST00000548498 TAF7Q15545 349 aaPredicted RBP12.84□□□□□ -0.35
SLC48A1-206ENST00000548498 ZNF34Q8IZ26 560 aa12.84□□□□□ -0.35
SLC48A1-206ENST00000548498 RRP7AQ9Y3A4 280 aaKnown RBP12.84□□□□□ -0.35
SLC48A1-206ENST00000548498 ATP6V0A2Q9Y487 856 aa12.84□□□□□ -0.35
SLC48A1-206ENST00000548498 RAD17O75943 681 aa12.83□□□□□ -0.36
SLC48A1-206ENST00000548498 NOGQ13253 232 aa12.83□□□□□ -0.36
SLC48A1-206ENST00000548498 PNISRQ8TF01 805 aaKnown RBP12.83□□□□□ -0.36
SLC48A1-206ENST00000548498 RTFDC1Q9BY42 306 aaPredicted RBP12.83□□□□□ -0.36
SLC48A1-206ENST00000548498 BABAM1Q9NWV8 329 aa12.83□□□□□ -0.36
SLC48A1-206ENST00000548498 ZNF646O15015 1829 aaPredicted RBP12.83□□□□□ -0.36
SLC48A1-206ENST00000548498 YDJCA8MPS7 323 aa12.82□□□□□ -0.36
SLC48A1-206ENST00000548498 FAM155AB1AL88 458 aaPredicted RBP12.82□□□□□ -0.36
SLC48A1-206ENST00000548498 NEFMP07197 916 aa12.82□□□□□ -0.36
SLC48A1-206ENST00000548498 HOXD11P31277 338 aaPredicted RBP12.82□□□□□ -0.36
SLC48A1-206ENST00000548498 HUNKP57058 714 aa12.82□□□□□ -0.36
SLC48A1-206ENST00000548498 BCL2L13Q9BXK5 485 aa12.82□□□□□ -0.36
SLC48A1-206ENST00000548498 SPEF2Q9C093 1822 aa12.82□□□□□ -0.36
SLC48A1-206ENST00000548498 EIF4A1P60842 406 aaKnown RBP12.81□□□□□ -0.36
SLC48A1-206ENST00000548498 KIAA2012Q0VF49 1180 aa12.81□□□□□ -0.36
SLC48A1-206ENST00000548498 GIGYF2Q6Y7W6 1299 aaKnown RBP12.81□□□□□ -0.36
SLC48A1-206ENST00000548498 CDC37L1Q7L3B6 337 aa12.81□□□□□ -0.36
SLC48A1-206ENST00000548498 ZC3H15Q8WU90 426 aaKnown RBP12.81□□□□□ -0.36
SLC48A1-206ENST00000548498 VPS33BQ9H267 617 aa12.81□□□□□ -0.36
SLC48A1-206ENST00000548498 EGFRP00533 1210 aa12.8□□□□□ -0.36
SLC48A1-206ENST00000548498 DPP8Q6V1X1 898 aaPredicted RBP12.8□□□□□ -0.36
SLC48A1-206ENST00000548498 LRP10Q7Z4F1 713 aa12.8□□□□□ -0.36
SLC48A1-206ENST00000548498 USP48Q86UV5 1035 aa12.8□□□□□ -0.36
SLC48A1-206ENST00000548498 MICALL2Q8IY33 904 aa12.8□□□□□ -0.36
SLC48A1-206ENST00000548498 SUPT20HQ8NEM7 779 aa12.8□□□□□ -0.36
SLC48A1-206ENST00000548498 NLRP3Q96P20 1036 aa12.8□□□□□ -0.36
SLC48A1-206ENST00000548498 THUMPD2Q9BTF0 503 aaKnown RBP12.8□□□□□ -0.36
SLC48A1-206ENST00000548498 CNOT7Q9UIV1 285 aaKnown RBP12.8□□□□□ -0.36
SLC48A1-206ENST00000548498 PAPPA2Q9BXP8 1791 aa12.79□□□□□ -0.36
SLC48A1-206ENST00000548498 PPP1R42Q7Z4L9 355 aa12.79□□□□□ -0.36
SLC48A1-206ENST00000548498 MPNDQ8N594 471 aa12.79□□□□□ -0.36
SLC48A1-206ENST00000548498 TMX4Q9H1E5 349 aaPredicted RBP12.79□□□□□ -0.36
SLC48A1-206ENST00000548498 ZBTB12Q9Y330 459 aaPredicted RBP12.79□□□□□ -0.36
SLC48A1-206ENST00000548498 MAPK8IP3Q9UPT6 1336 aa12.79□□□□□ -0.36
SLC48A1-206ENST00000548498 ADM5C9JUS6 153 aa12.78□□□□□ -0.36
SLC48A1-206ENST00000548498 TMPOP42166 694 aaKnown RBP12.78□□□□□ -0.36
SLC48A1-206ENST00000548498 TNIP1Q15025 636 aa12.78□□□□□ -0.36
SLC48A1-206ENST00000548498 PARP10Q53GL7 1025 aa12.78□□□□□ -0.36
SLC48A1-206ENST00000548498 SLC10A5Q5PT55 438 aa12.78□□□□□ -0.36
SLC48A1-206ENST00000548498 RGMBQ6NW40 437 aa12.78□□□□□ -0.36
SLC48A1-206ENST00000548498 SAMD7Q7Z3H4 446 aa12.78□□□□□ -0.36
SLC48A1-206ENST00000548498 SP8Q8IXZ3 490 aa12.78□□□□□ -0.36
SLC48A1-206ENST00000548498 UTP14AQ9BVJ6 771 aaKnown RBP12.78□□□□□ -0.36
SLC48A1-206ENST00000548498 SAGE1Q9NXZ1 904 aa12.78□□□□□ -0.36
SLC48A1-206ENST00000548498 LAMB1P07942 1786 aa12.77□□□□□ -0.36
SLC48A1-206ENST00000548498 RBBP6Q7Z6E9 1792 aaKnown RBP12.77□□□□□ -0.36
SLC48A1-206ENST00000548498 ANXA1P04083 346 aa12.77□□□□□ -0.37
SLC48A1-206ENST00000548498 HCLS1P14317 486 aaPredicted RBP12.77□□□□□ -0.37
SLC48A1-206ENST00000548498 KIF23Q02241 960 aaPredicted RBP12.77□□□□□ -0.37
SLC48A1-206ENST00000548498 LMOD3Q0VAK6 560 aa12.77□□□□□ -0.37
SLC48A1-206ENST00000548498 PROSER3Q2NL68 480 aa12.77□□□□□ -0.37
SLC48A1-206ENST00000548498 TBC1D10BQ4KMP7 808 aaPredicted RBP12.77□□□□□ -0.37
SLC48A1-206ENST00000548498 GBA2Q9HCG7 927 aaPredicted RBP12.77□□□□□ -0.37
SLC48A1-206ENST00000548498 ERBB4Q15303 1308 aa12.77□□□□□ -0.37
SLC48A1-206ENST00000548498 PSMD14O00487 310 aa12.76□□□□□ -0.37
SLC48A1-206ENST00000548498 TRPA1O75762 1119 aa12.76□□□□□ -0.37
SLC48A1-206ENST00000548498 PDIA6Q15084 440 aa12.76□□□□□ -0.37
SLC48A1-206ENST00000548498 PRPF38BQ5VTL8 546 aaKnown RBP12.76□□□□□ -0.37
SLC48A1-206ENST00000548498 KRT26Q7Z3Y9 468 aa12.76□□□□□ -0.37
SLC48A1-206ENST00000548498 RUNDC1Q96C34 613 aa12.76□□□□□ -0.37
SLC48A1-206ENST00000548498 RNF186Q9NXI6 227 aa12.76□□□□□ -0.37
SLC48A1-206ENST00000548498 H7C1D1 291 aa12.75□□□□□ -0.37
SLC48A1-206ENST00000548498 BBOX1O75936 387 aa12.75□□□□□ -0.37
SLC48A1-206ENST00000548498 MYH3P11055 1940 aa12.75□□□□□ -0.37
SLC48A1-206ENST00000548498 RIPK4P57078 832 aa12.75□□□□□ -0.37
SLC48A1-206ENST00000548498 GRAPQ13588 217 aa12.75□□□□□ -0.37
SLC48A1-206ENST00000548498 RTL9Q8NET4 1388 aa12.75□□□□□ -0.37
SLC48A1-206ENST00000548498 GRAPLQ8TC17 118 aaPredicted RBP12.75□□□□□ -0.37
SLC48A1-206ENST00000548498 ZNF428Q96B54 188 aa12.75□□□□□ -0.37
SLC48A1-206ENST00000548498 DBNDD1Q9H9R9 158 aa12.75□□□□□ -0.37
SLC48A1-206ENST00000548498 ADAMTS8Q9UP79 889 aa12.75□□□□□ -0.37
SLC48A1-206ENST00000548498 ASTN2O75129 1339 aaPredicted RBP12.74□□□□□ -0.37
SLC48A1-206ENST00000548498 CHL1O00533 1208 aa12.74□□□□□ -0.37
SLC48A1-206ENST00000548498 SLC10A3P09131 477 aa12.74□□□□□ -0.37
SLC48A1-206ENST00000548498 ZNF157P51786 506 aaPredicted RBP12.74□□□□□ -0.37
SLC48A1-206ENST00000548498 DDX46Q7L014 1031 aaKnown RBP12.74□□□□□ -0.37
SLC48A1-206ENST00000548498 NLRP10Q86W26 655 aa12.74□□□□□ -0.37
SLC48A1-206ENST00000548498 KCNQ5Q9NR82 932 aa12.74□□□□□ -0.37
SLC48A1-206ENST00000548498 TRIM35Q9UPQ4 493 aa12.74□□□□□ -0.37
SLC48A1-206ENST00000548498 ZNF316A6NFI3 1004 aaPredicted RBP12.73□□□□□ -0.37
SLC48A1-206ENST00000548498 WDR43Q15061 677 aaKnown RBP eCLIP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms