RNA–Protein interactions for RNA: ENST00000548365.5

TGFBR1-205, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 3

Gene TGFBR1, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-205ENST00000548365 SHANK2Q9UPX8 1470 aa6.85□□□□□ -1.31
TGFBR1-205ENST00000548365 PTPRKQ15262 1439 aa6.85□□□□□ -1.31
TGFBR1-205ENST00000548365 SHISA8B8ZZ34 492 aa6.85□□□□□ -1.31
TGFBR1-205ENST00000548365 KHNYNO15037 678 aaKnown RBP6.85□□□□□ -1.31
TGFBR1-205ENST00000548365 DDX10Q13206 875 aaKnown RBP6.85□□□□□ -1.31
TGFBR1-205ENST00000548365 FAM50AQ14320 339 aaKnown RBP6.85□□□□□ -1.31
TGFBR1-205ENST00000548365 FAM26DQ5JW98 314 aa6.85□□□□□ -1.31
TGFBR1-205ENST00000548365 FIGNL1Q6PIW4 674 aa6.85□□□□□ -1.31
TGFBR1-205ENST00000548365 NGLY1Q96IV0 654 aa6.85□□□□□ -1.31
TGFBR1-205ENST00000548365 LRFN2Q9ULH4 789 aa6.85□□□□□ -1.31
TGFBR1-205ENST00000548365 RBM19Q9Y4C8 960 aaKnown RBP6.85□□□□□ -1.31
TGFBR1-205ENST00000548365 DENND4BO75064 1496 aaPredicted RBP6.85□□□□□ -1.31
TGFBR1-205ENST00000548365 MBD5Q9P267 1494 aa6.85□□□□□ -1.31
TGFBR1-205ENST00000548365 RAD54L2Q9Y4B4 1467 aa6.85□□□□□ -1.31
TGFBR1-205ENST00000548365 PRMT3O60678 531 aa6.84□□□□□ -1.31
TGFBR1-205ENST00000548365 BCRP11274 1271 aa6.84□□□□□ -1.31
TGFBR1-205ENST00000548365 FAM182BQ5T319 152 aa6.84□□□□□ -1.31
TGFBR1-205ENST00000548365 SLC30A3Q99726 388 aa6.84□□□□□ -1.31
TGFBR1-205ENST00000548365 MDFIQ99750 246 aa6.84□□□□□ -1.31
TGFBR1-205ENST00000548365 OXCT2Q9BYC2 517 aaPredicted RBP6.84□□□□□ -1.31
TGFBR1-205ENST00000548365 PHF24Q9UPV7 400 aa6.84□□□□□ -1.31
TGFBR1-205ENST00000548365 GPC6Q9Y625 555 aaPredicted RBP6.84□□□□□ -1.31
TGFBR1-205ENST00000548365 SPATA31E1Q6ZUB1 1445 aa6.84□□□□□ -1.32
TGFBR1-205ENST00000548365 KIAA0556O60303 1618 aa6.83□□□□□ -1.32
TGFBR1-205ENST00000548365 MAGI3Q5TCQ9 1506 aa6.83□□□□□ -1.32
TGFBR1-205ENST00000548365 CARNS1A5YM72 827 aa6.83□□□□□ -1.32
TGFBR1-205ENST00000548365 OIP5O43482 229 aa6.83□□□□□ -1.32
TGFBR1-205ENST00000548365 BMP4P12644 408 aa6.83□□□□□ -1.32
TGFBR1-205ENST00000548365 MAP2K3P46734 347 aa6.83□□□□□ -1.32
TGFBR1-205ENST00000548365 TYRO3Q06418 890 aa6.83□□□□□ -1.32
TGFBR1-205ENST00000548365 SWI5Q1ZZU3 235 aa6.83□□□□□ -1.32
TGFBR1-205ENST00000548365 SAP130Q9H0E3 1048 aa6.83□□□□□ -1.32
TGFBR1-205ENST00000548365 KLK14Q9P0G3 267 aa6.83□□□□□ -1.32
TGFBR1-205ENST00000548365 LAMC1P11047 1609 aa6.83□□□□□ -1.32
TGFBR1-205ENST00000548365 TMEM88BA6NKF7 163 aa6.82□□□□□ -1.32
TGFBR1-205ENST00000548365 FOXO3O43524 673 aa6.82□□□□□ -1.32
TGFBR1-205ENST00000548365 SCNN1AP37088 669 aa6.82□□□□□ -1.32
TGFBR1-205ENST00000548365 RTN1Q16799 776 aa6.82□□□□□ -1.32
TGFBR1-205ENST00000548365 FCHSD1Q86WN1 690 aa6.82□□□□□ -1.32
TGFBR1-205ENST00000548365 PPP4R2Q9NY27 417 aa6.82□□□□□ -1.32
TGFBR1-205ENST00000548365 GGA1Q9UJY5 639 aa6.82□□□□□ -1.32
TGFBR1-205ENST00000548365 CDK11AQ9UQ88 783 aaPredicted RBP6.82□□□□□ -1.32
TGFBR1-205ENST00000548365 RAPGEF6Q8TEU7 1601 aa6.82□□□□□ -1.32
TGFBR1-205ENST00000548365 DAPK1P53355 1430 aa6.82□□□□□ -1.32
TGFBR1-205ENST00000548365 UHRF1BP1Q6BDS2 1440 aa6.82□□□□□ -1.32
TGFBR1-205ENST00000548365 ANKRD30BQ9BXX2 1392 aa6.82□□□□□ -1.32
TGFBR1-205ENST00000548365 KIAA0586Q9BVV6 1533 aa6.81□□□□□ -1.32
TGFBR1-205ENST00000548365 RANGAP1P46060 587 aaPredicted RBP6.81□□□□□ -1.32
TGFBR1-205ENST00000548365 KCNQ4P56696 695 aa6.81□□□□□ -1.32
TGFBR1-205ENST00000548365 BTLAQ7Z6A9 289 aa6.81□□□□□ -1.32
TGFBR1-205ENST00000548365 CLP1Q92989 425 aaKnown RBP6.81□□□□□ -1.32
TGFBR1-205ENST00000548365 SIN3AQ96ST3 1273 aa6.81□□□□□ -1.32
TGFBR1-205ENST00000548365 MARK1Q9P0L2 795 aa6.81□□□□□ -1.32
TGFBR1-205ENST00000548365 CCDC7Q96M83 1385 aa6.81□□□□□ -1.32
TGFBR1-205ENST00000548365 E9PCH4 1651 aa6.81□□□□□ -1.32
TGFBR1-205ENST00000548365 NEURL1BA8MQ27 555 aa6.8□□□□□ -1.32
TGFBR1-205ENST00000548365 ARAFP10398 606 aa6.8□□□□□ -1.32
TGFBR1-205ENST00000548365 KDM5CP41229 1560 aa6.8□□□□□ -1.32
TGFBR1-205ENST00000548365 PCBP4P57723 403 aaKnown RBP6.8□□□□□ -1.32
TGFBR1-205ENST00000548365 SNRPNP63162 240 aaKnown RBP6.8□□□□□ -1.32
TGFBR1-205ENST00000548365 LAMC2Q13753 1193 aa6.8□□□□□ -1.32
TGFBR1-205ENST00000548365 COX20Q5RI15 118 aa6.8□□□□□ -1.32
TGFBR1-205ENST00000548365 SMG6Q86US8 1419 aaKnown RBP6.8□□□□□ -1.32
TGFBR1-205ENST00000548365 MYO19Q96H55 970 aa6.8□□□□□ -1.32
TGFBR1-205ENST00000548365 CXXC1Q9P0U4 656 aaPredicted RBP6.8□□□□□ -1.32
TGFBR1-205ENST00000548365 GJA3Q9Y6H8 435 aa6.8□□□□□ -1.32
TGFBR1-205ENST00000548365 RALGAPBQ86X10 1494 aa6.79□□□□□ -1.32
TGFBR1-205ENST00000548365 RNF123Q5XPI4 1314 aa6.79□□□□□ -1.32
TGFBR1-205ENST00000548365 CNTNAP5Q8WYK1 1306 aa6.79□□□□□ -1.32
TGFBR1-205ENST00000548365 EPXP11678 715 aa6.79□□□□□ -1.32
TGFBR1-205ENST00000548365 ITGAEP38570 1179 aa6.79□□□□□ -1.32
TGFBR1-205ENST00000548365 DGKZQ13574 1117 aa6.79□□□□□ -1.32
TGFBR1-205ENST00000548365 ZNF468Q5VIY5 522 aaPredicted RBP6.79□□□□□ -1.32
TGFBR1-205ENST00000548365 SLCO4C1Q6ZQN7 724 aa6.79□□□□□ -1.32
TGFBR1-205ENST00000548365 GALNT6Q8NCL4 622 aa6.79□□□□□ -1.32
TGFBR1-205ENST00000548365 EDARADDQ8WWZ3 215 aa6.79□□□□□ -1.32
TGFBR1-205ENST00000548365 CEP63Q96MT8 703 aa6.79□□□□□ -1.32
TGFBR1-205ENST00000548365 BRD7Q9NPI1 651 aa6.79□□□□□ -1.32
TGFBR1-205ENST00000548365 LRRC4BQ9NT99 713 aa6.79□□□□□ -1.32
TGFBR1-205ENST00000548365 CHMP3Q9Y3E7 222 aa6.79□□□□□ -1.32
TGFBR1-205ENST00000548365 DNMT3AQ9Y6K1 912 aaPredicted RBP6.79□□□□□ -1.32
TGFBR1-205ENST00000548365 IFT140Q96RY7 1462 aa6.79□□□□□ -1.32
TGFBR1-205ENST00000548365 WASHC2AQ641Q2 1341 aa6.78□□□□□ -1.32
TGFBR1-205ENST00000548365 ARHGEF5Q12774 1597 aa6.78□□□□□ -1.32
TGFBR1-205ENST00000548365 TGFBR3LH3BV60 316 aa6.78□□□□□ -1.32
TGFBR1-205ENST00000548365 TNFRSF10BO14763 440 aa6.78□□□□□ -1.32
TGFBR1-205ENST00000548365 OPLAHO14841 1288 aa6.78□□□□□ -1.32
TGFBR1-205ENST00000548365 INPP5BP32019 993 aa6.78□□□□□ -1.32
TGFBR1-205ENST00000548365 KCNMA1Q12791 1236 aa6.78□□□□□ -1.32
TGFBR1-205ENST00000548365 IER5Q5VY09 327 aa6.78□□□□□ -1.32
TGFBR1-205ENST00000548365 RAB44Q7Z6P3 723 aaPredicted RBP6.78□□□□□ -1.32
TGFBR1-205ENST00000548365 PRKRIP1Q9H875 184 aaPredicted RBP6.78□□□□□ -1.32
TGFBR1-205ENST00000548365 NSFL1CQ9UNZ2 370 aaKnown RBP6.78□□□□□ -1.32
TGFBR1-205ENST00000548365 PLEKHH2Q8IVE3 1493 aa6.78□□□□□ -1.32
TGFBR1-205ENST00000548365 MRC2Q9UBG0 1479 aa6.78□□□□□ -1.32
TGFBR1-205ENST00000548365 TROQ12816 1431 aaPredicted RBP6.77□□□□□ -1.33
TGFBR1-205ENST00000548365 PHLDB3Q6NSJ2 640 aa6.77□□□□□ -1.33
TGFBR1-205ENST00000548365 GOLGA6L1Q8N7Z2 621 aa6.77□□□□□ -1.33
TGFBR1-205ENST00000548365 BTBD6Q96KE9 485 aa6.77□□□□□ -1.33
TGFBR1-205ENST00000548365 MKNK1Q9BUB5 465 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms