RNA–Protein interactions for RNA: ENST00000548116.5

SMPDL3B-205, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

TSL 2

Gene SMPDL3B, Length 1,913 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-205ENST00000548116 PUS3Q9BZE2 481 aaKnown RBP16.68■□□□□ 0.26
SMPDL3B-205ENST00000548116 GREM2Q9H772 168 aa16.68■□□□□ 0.26
SMPDL3B-205ENST00000548116 ECHDC1Q9NTX5 307 aa16.68■□□□□ 0.26
SMPDL3B-205ENST00000548116 SRP68Q9UHB9 627 aaKnown RBP16.68■□□□□ 0.26
SMPDL3B-205ENST00000548116 FPGT-TNNI3KV9GXZ4 949 aa16.68■□□□□ 0.26
SMPDL3B-205ENST00000548116 DDX60Q8IY21 1712 aaKnown RBP16.68■□□□□ 0.26
SMPDL3B-205ENST00000548116 FAM177BA6PVY3 158 aa16.68■□□□□ 0.26
SMPDL3B-205ENST00000548116 IL15P40933 162 aaPredicted RBP16.68■□□□□ 0.26
SMPDL3B-205ENST00000548116 USPL1Q5W0Q7 1092 aa16.68■□□□□ 0.26
SMPDL3B-205ENST00000548116 ARHGEF1Q92888 912 aaKnown RBP16.68■□□□□ 0.26
SMPDL3B-205ENST00000548116 AK7Q96M32 723 aa16.68■□□□□ 0.26
SMPDL3B-205ENST00000548116 C4AP0C0L4 1744 aa16.67■□□□□ 0.26
SMPDL3B-205ENST00000548116 GLRX3O76003 335 aaKnown RBP16.67■□□□□ 0.26
SMPDL3B-205ENST00000548116 HCLS1P14317 486 aaPredicted RBP16.67■□□□□ 0.26
SMPDL3B-205ENST00000548116 IFIT5Q13325 482 aaKnown RBP16.67■□□□□ 0.26
SMPDL3B-205ENST00000548116 SLC27A3Q5K4L6 730 aa16.67■□□□□ 0.26
SMPDL3B-205ENST00000548116 C22orf23Q9BZE7 217 aa16.67■□□□□ 0.26
SMPDL3B-205ENST00000548116 LAMB2P55268 1798 aa16.67■□□□□ 0.26
SMPDL3B-205ENST00000548116 TRIM6-TRIM34B2RNG4 842 aa16.66■□□□□ 0.26
SMPDL3B-205ENST00000548116 ITGA6P23229 1130 aa16.66■□□□□ 0.26
SMPDL3B-205ENST00000548116 TBC1D9BQ66K14 1250 aa16.66■□□□□ 0.26
SMPDL3B-205ENST00000548116 FBXO3Q9UK99 471 aa16.66■□□□□ 0.26
SMPDL3B-205ENST00000548116 ERC2O15083 957 aa16.66■□□□□ 0.26
SMPDL3B-205ENST00000548116 POTEAQ6S8J7 498 aa16.66■□□□□ 0.26
SMPDL3B-205ENST00000548116 PROM2Q8N271 834 aa16.66■□□□□ 0.26
SMPDL3B-205ENST00000548116 RILPL2Q969X0 211 aa16.66■□□□□ 0.26
SMPDL3B-205ENST00000548116 GPATCH3Q96I76 525 aa16.66■□□□□ 0.26
SMPDL3B-205ENST00000548116 DBNLQ9UJU6 430 aaKnown RBP16.66■□□□□ 0.26
SMPDL3B-205ENST00000548116 UBR3Q6ZT12 1888 aa16.66■□□□□ 0.26
SMPDL3B-205ENST00000548116 AK9Q5TCS8 1911 aa16.65■□□□□ 0.26
SMPDL3B-205ENST00000548116 MAP4K4O95819 1239 aaPredicted RBP16.65■□□□□ 0.26
SMPDL3B-205ENST00000548116 GPR108Q9NPR9 543 aa16.65■□□□□ 0.26
SMPDL3B-205ENST00000548116 COL24A1Q17RW2 1714 aa16.64■□□□□ 0.26
SMPDL3B-205ENST00000548116 ZPR1O75312 459 aa16.64■□□□□ 0.26
SMPDL3B-205ENST00000548116 CHMLP26374 656 aa16.64■□□□□ 0.26
SMPDL3B-205ENST00000548116 ANKRD18BA2A2Z9 1011 aa16.64■□□□□ 0.25
SMPDL3B-205ENST00000548116 RBM25P49756 843 aaKnown RBP16.64■□□□□ 0.25
SMPDL3B-205ENST00000548116 TRAPPC3LQ5T215 181 aa16.64■□□□□ 0.25
SMPDL3B-205ENST00000548116 CASC1Q6TDU7 716 aa16.63■□□□□ 0.25
SMPDL3B-205ENST00000548116 DBNDD2Q9BQY9 259 aa16.63■□□□□ 0.25
SMPDL3B-205ENST00000548116 RIPOR2Q9Y4F9 1068 aa16.63■□□□□ 0.25
SMPDL3B-205ENST00000548116 LRP5O75197 1615 aa16.63■□□□□ 0.25
SMPDL3B-205ENST00000548116 ZNF609O15014 1411 aa16.63■□□□□ 0.25
SMPDL3B-205ENST00000548116 PHF14O94880 888 aa16.62■□□□□ 0.25
SMPDL3B-205ENST00000548116 TXNRD1Q16881 649 aa16.62■□□□□ 0.25
SMPDL3B-205ENST00000548116 TAF7LQ5H9L4 462 aa16.62■□□□□ 0.25
SMPDL3B-205ENST00000548116 BICDL1Q6ZP65 573 aa16.62■□□□□ 0.25
SMPDL3B-205ENST00000548116 DDRGK1Q96HY6 314 aa16.62■□□□□ 0.25
SMPDL3B-205ENST00000548116 RIC1Q4ADV7 1423 aa16.62■□□□□ 0.25
SMPDL3B-205ENST00000548116 ADRA2BP18089 450 aa16.62■□□□□ 0.25
SMPDL3B-205ENST00000548116 ERFEQ4G0M1 354 aa16.62■□□□□ 0.25
SMPDL3B-205ENST00000548116 CNTROBQ8N137 903 aa16.62■□□□□ 0.25
SMPDL3B-205ENST00000548116 RTL9Q8NET4 1388 aa16.61■□□□□ 0.25
SMPDL3B-205ENST00000548116 PLSCR1O15162 318 aa16.61■□□□□ 0.25
SMPDL3B-205ENST00000548116 RFC4P35249 363 aa16.61■□□□□ 0.25
SMPDL3B-205ENST00000548116 TIMM10P62072 90 aa16.61■□□□□ 0.25
SMPDL3B-205ENST00000548116 ESYT1Q9BSJ8 1104 aa16.61■□□□□ 0.25
SMPDL3B-205ENST00000548116 CEP126Q9P2H0 1117 aa16.61■□□□□ 0.25
SMPDL3B-205ENST00000548116 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.6■□□□□ 0.25
SMPDL3B-205ENST00000548116 EIF5BO60841 1220 aaKnown RBP16.6■□□□□ 0.25
SMPDL3B-205ENST00000548116 HSP90B1P14625 803 aaKnown RBP16.6■□□□□ 0.25
SMPDL3B-205ENST00000548116 ATP5JP18859 108 aa16.6■□□□□ 0.25
SMPDL3B-205ENST00000548116 LDHAL6AQ6ZMR3 332 aa16.6■□□□□ 0.25
SMPDL3B-205ENST00000548116 SETDB2Q96T68 719 aa16.6■□□□□ 0.25
SMPDL3B-205ENST00000548116 USP26Q9BXU7 913 aa16.6■□□□□ 0.25
SMPDL3B-205ENST00000548116 BOLA2Q9H3K6 86 aa16.6■□□□□ 0.25
SMPDL3B-205ENST00000548116 SLC10A5Q5PT55 438 aa16.6■□□□□ 0.25
SMPDL3B-205ENST00000548116 C3orf67Q6ZVT6 689 aa16.6■□□□□ 0.25
SMPDL3B-205ENST00000548116 SEC31BQ9NQW1 1179 aa16.6■□□□□ 0.25
SMPDL3B-205ENST00000548116 ABCC12Q96J65 1359 aa16.59■□□□□ 0.25
SMPDL3B-205ENST00000548116 CASZ1Q86V15 1759 aa16.59■□□□□ 0.25
SMPDL3B-205ENST00000548116 A0A1B0GUL7 405 aa16.59■□□□□ 0.25
SMPDL3B-205ENST00000548116 CCDC152Q4G0S7 254 aa16.59■□□□□ 0.25
SMPDL3B-205ENST00000548116 VGLL2Q8N8G2 317 aa16.59■□□□□ 0.25
SMPDL3B-205ENST00000548116 TNS1Q9HBL0 1735 aaKnown RBP16.59■□□□□ 0.25
SMPDL3B-205ENST00000548116 COL4A1P02462 1669 aa16.59■□□□□ 0.25
SMPDL3B-205ENST00000548116 APBA3O96018 575 aa16.58■□□□□ 0.25
SMPDL3B-205ENST00000548116 EVI5LQ96CN4 794 aa16.58■□□□□ 0.25
SMPDL3B-205ENST00000548116 NEUROD6Q96NK8 337 aa16.58■□□□□ 0.25
SMPDL3B-205ENST00000548116 KIF2CQ99661 725 aa16.58■□□□□ 0.25
SMPDL3B-205ENST00000548116 IL25Q9H293 177 aa16.58■□□□□ 0.25
SMPDL3B-205ENST00000548116 SSFA2P28290 1259 aa16.58■□□□□ 0.24
SMPDL3B-205ENST00000548116 NYXQ9GZU5 481 aa16.58■□□□□ 0.24
SMPDL3B-205ENST00000548116 CNNM1Q9NRU3 951 aa16.58■□□□□ 0.24
SMPDL3B-205ENST00000548116 REC8O95072 547 aa16.57■□□□□ 0.24
SMPDL3B-205ENST00000548116 SF3B3Q15393 1217 aaKnown RBP16.57■□□□□ 0.24
SMPDL3B-205ENST00000548116 METTL24Q5JXM2 366 aa16.57■□□□□ 0.24
SMPDL3B-205ENST00000548116 AKAP2Q9Y2D5 859 aa16.57■□□□□ 0.24
SMPDL3B-205ENST00000548116 NFIXQ14938 502 aa16.57■□□□□ 0.24
SMPDL3B-205ENST00000548116 NBPF5PQ86XG9 351 aaPredicted RBP16.57■□□□□ 0.24
SMPDL3B-205ENST00000548116 HAUS7Q99871 368 aa16.57■□□□□ 0.24
SMPDL3B-205ENST00000548116 GYS1P13807 737 aa16.56■□□□□ 0.24
SMPDL3B-205ENST00000548116 ADORA1P30542 326 aa16.56■□□□□ 0.24
SMPDL3B-205ENST00000548116 EDC3Q96F86 508 aaKnown RBP16.56■□□□□ 0.24
SMPDL3B-205ENST00000548116 ZNF827Q17R98 1081 aa16.55■□□□□ 0.24
SMPDL3B-205ENST00000548116 TPTE2Q6XPS3 522 aa16.55■□□□□ 0.24
SMPDL3B-205ENST00000548116 AKT1S1Q96B36 256 aa16.55■□□□□ 0.24
SMPDL3B-205ENST00000548116 XAGE2Q96GT9 111 aa16.55■□□□□ 0.24
SMPDL3B-205ENST00000548116 SPEF2Q9C093 1822 aa16.55■□□□□ 0.24
SMPDL3B-205ENST00000548116 NDUFB9Q9Y6M9 179 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms