RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 BOLA1Q9Y3E2 137 aa8.74□□□□□ -1.01
SCAF11-211ENST00000547950 UBN2Q6ZU65 1347 aa8.74□□□□□ -1.01
SCAF11-211ENST00000547950 LTBP3Q9NS15 1303 aa8.74□□□□□ -1.01
SCAF11-211ENST00000547950 NRXN2Q9P2S2 1712 aa8.74□□□□□ -1.01
SCAF11-211ENST00000547950 FKBP4Q02790 459 aaKnown RBP eCLIP8.73□□□□□ -1.01
SCAF11-211ENST00000547950 CRY2Q49AN0 593 aa8.73□□□□□ -1.01
SCAF11-211ENST00000547950 PARP10Q53GL7 1025 aa8.73□□□□□ -1.01
SCAF11-211ENST00000547950 DNAJC5GQ8N7S2 189 aa8.73□□□□□ -1.01
SCAF11-211ENST00000547950 RNF25Q96BH1 459 aaPredicted RBP8.73□□□□□ -1.01
SCAF11-211ENST00000547950 RBM17Q96I25 401 aaKnown RBP8.73□□□□□ -1.01
SCAF11-211ENST00000547950 NLRP3Q96P20 1036 aa8.73□□□□□ -1.01
SCAF11-211ENST00000547950 DDX21Q9NR30 783 aaKnown RBP eCLIP8.73□□□□□ -1.01
SCAF11-211ENST00000547950 CHPF2Q9P2E5 772 aa8.73□□□□□ -1.01
SCAF11-211ENST00000547950 ABCC12Q96J65 1359 aa8.73□□□□□ -1.01
SCAF11-211ENST00000547950 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.72□□□□□ -1.01
SCAF11-211ENST00000547950 ELL2O00472 640 aaPredicted RBP8.72□□□□□ -1.01
SCAF11-211ENST00000547950 NTSR2O95665 410 aa8.72□□□□□ -1.01
SCAF11-211ENST00000547950 HCLS1P14317 486 aaPredicted RBP8.72□□□□□ -1.01
SCAF11-211ENST00000547950 HOXA10P31260 410 aaPredicted RBP8.72□□□□□ -1.01
SCAF11-211ENST00000547950 HDGFL1Q5TGJ6 251 aa8.72□□□□□ -1.01
SCAF11-211ENST00000547950 MARVELD3Q96A59 401 aa8.72□□□□□ -1.01
SCAF11-211ENST00000547950 ZFP91Q96JP5 570 aaPredicted RBP8.72□□□□□ -1.01
SCAF11-211ENST00000547950 CFAP44Q96MT7 982 aa8.72□□□□□ -1.01
SCAF11-211ENST00000547950 TRMT112Q9UI30 125 aaKnown RBP8.72□□□□□ -1.01
SCAF11-211ENST00000547950 AFDNP55196 1824 aaKnown RBP8.72□□□□□ -1.01
SCAF11-211ENST00000547950 IARSP41252 1262 aaKnown RBP8.71□□□□□ -1.02
SCAF11-211ENST00000547950 TCIRG1Q13488 830 aa8.71□□□□□ -1.02
SCAF11-211ENST00000547950 HSP90AB3PQ58FF7 597 aa8.71□□□□□ -1.02
SCAF11-211ENST00000547950 SLC10A5Q5PT55 438 aa8.71□□□□□ -1.02
SCAF11-211ENST00000547950 DUSP27Q5VZP5 1158 aa8.71□□□□□ -1.02
SCAF11-211ENST00000547950 CC2D2BQ6DHV5 1058 aa8.71□□□□□ -1.02
SCAF11-211ENST00000547950 ANKRD13DQ6ZTN6 518 aa8.71□□□□□ -1.02
SCAF11-211ENST00000547950 NLRP10Q86W26 655 aa8.71□□□□□ -1.02
SCAF11-211ENST00000547950 CRAMP1Q96RY5 1269 aa8.71□□□□□ -1.02
SCAF11-211ENST00000547950 TMX4Q9H1E5 349 aaPredicted RBP8.71□□□□□ -1.02
SCAF11-211ENST00000547950 MBIPQ9NS73 344 aa8.71□□□□□ -1.02
SCAF11-211ENST00000547950 SCN7AQ01118 1682 aa8.71□□□□□ -1.02
SCAF11-211ENST00000547950 VIRMAQ69YN4 1812 aaKnown RBP8.7□□□□□ -1.02
SCAF11-211ENST00000547950 ATP5J2-PTCD1G3V325 749 aa8.7□□□□□ -1.02
SCAF11-211ENST00000547950 PPEF1O14829 653 aaPredicted RBP8.7□□□□□ -1.02
SCAF11-211ENST00000547950 ZEB1P37275 1124 aaPredicted RBP8.7□□□□□ -1.02
SCAF11-211ENST00000547950 CCDC184Q52MB2 194 aa8.7□□□□□ -1.02
SCAF11-211ENST00000547950 SLC51AQ86UW1 340 aa8.7□□□□□ -1.02
SCAF11-211ENST00000547950 JDP2Q8WYK2 163 aa8.7□□□□□ -1.02
SCAF11-211ENST00000547950 DBF4Q9UBU7 674 aaPredicted RBP8.7□□□□□ -1.02
SCAF11-211ENST00000547950 ARFGEF1Q9Y6D6 1849 aa8.7□□□□□ -1.02
SCAF11-211ENST00000547950 BRCA1P38398 1863 aaKnown RBP8.7□□□□□ -1.02
SCAF11-211ENST00000547950 CEP350Q5VT06 3117 aa8.69□□□□□ -1.02
SCAF11-211ENST00000547950 IQCA1LA6NCM1 817 aa8.69□□□□□ -1.02
SCAF11-211ENST00000547950 ZNF853P0CG23 659 aa8.69□□□□□ -1.02
SCAF11-211ENST00000547950 GNAI1P63096 354 aa8.69□□□□□ -1.02
SCAF11-211ENST00000547950 CALD1Q05682 793 aaKnown RBP8.69□□□□□ -1.02
SCAF11-211ENST00000547950 EAPPQ56P03 285 aaPredicted RBP8.69□□□□□ -1.02
SCAF11-211ENST00000547950 RTL5Q5HYW3 569 aaPredicted RBP8.69□□□□□ -1.02
SCAF11-211ENST00000547950 LARGE2Q8N3Y3 721 aa8.69□□□□□ -1.02
SCAF11-211ENST00000547950 PLBD2Q8NHP8 589 aa8.69□□□□□ -1.02
SCAF11-211ENST00000547950 KLRG1Q96E93 195 aa8.69□□□□□ -1.02
SCAF11-211ENST00000547950 PSMD1Q99460 953 aa8.69□□□□□ -1.02
SCAF11-211ENST00000547950 TMEM121BQ9BXQ6 578 aaPredicted RBP8.69□□□□□ -1.02
SCAF11-211ENST00000547950 HYPKQ9NX55 129 aa8.69□□□□□ -1.02
SCAF11-211ENST00000547950 GJA3Q9Y6H8 435 aa8.69□□□□□ -1.02
SCAF11-211ENST00000547950 SH3TC1Q8TE82 1336 aa8.69□□□□□ -1.02
SCAF11-211ENST00000547950 ZNF541Q9H0D2 1346 aa8.69□□□□□ -1.02
SCAF11-211ENST00000547950 FZD9O00144 591 aa8.68□□□□□ -1.02
SCAF11-211ENST00000547950 BBOX1O75936 387 aa8.68□□□□□ -1.02
SCAF11-211ENST00000547950 HOXB7P09629 217 aa8.68□□□□□ -1.02
SCAF11-211ENST00000547950 EIF6P56537 245 aaKnown RBP8.68□□□□□ -1.02
SCAF11-211ENST00000547950 GRIPAP1Q4V328 841 aa8.68□□□□□ -1.02
SCAF11-211ENST00000547950 DDX46Q7L014 1031 aaKnown RBP8.68□□□□□ -1.02
SCAF11-211ENST00000547950 RIC3Q7Z5B4 369 aa8.68□□□□□ -1.02
SCAF11-211ENST00000547950 C8orf58Q8NAV2 365 aa8.68□□□□□ -1.02
SCAF11-211ENST00000547950 FAM89AQ96GI7 184 aa8.68□□□□□ -1.02
SCAF11-211ENST00000547950 TAF1DQ9H5J8 278 aaPredicted RBP8.68□□□□□ -1.02
SCAF11-211ENST00000547950 IFT57Q9NWB7 429 aa8.68□□□□□ -1.02
SCAF11-211ENST00000547950 HACL1Q9UJ83 578 aa8.68□□□□□ -1.02
SCAF11-211ENST00000547950 ATP6V0A2Q9Y487 856 aa8.68□□□□□ -1.02
SCAF11-211ENST00000547950 IBTKQ9P2D0 1353 aaPredicted RBP8.68□□□□□ -1.02
SCAF11-211ENST00000547950 ANKRD31Q8N7Z5 1873 aa8.68□□□□□ -1.02
SCAF11-211ENST00000547950 ABCC4O15439 1325 aa8.67□□□□□ -1.02
SCAF11-211ENST00000547950 PPIP5K2O43314 1243 aa8.67□□□□□ -1.02
SCAF11-211ENST00000547950 EPHX2P34913 555 aa8.67□□□□□ -1.02
SCAF11-211ENST00000547950 SLX4Q8IY92 1834 aa8.67□□□□□ -1.02
SCAF11-211ENST00000547950 GPC2Q8N158 579 aa8.67□□□□□ -1.02
SCAF11-211ENST00000547950 ISCA1Q9BUE6 129 aa8.67□□□□□ -1.02
SCAF11-211ENST00000547950 PHAXQ9H814 394 aaKnown RBP8.67□□□□□ -1.02
SCAF11-211ENST00000547950 BCORQ6W2J9 1755 aa8.66□□□□□ -1.02
SCAF11-211ENST00000547950 KDM3BQ7LBC6 1761 aa8.66□□□□□ -1.02
SCAF11-211ENST00000547950 COL11A2P13942 1736 aaPredicted RBP8.66□□□□□ -1.02
SCAF11-211ENST00000547950 RNF123Q5XPI4 1314 aa8.66□□□□□ -1.02
SCAF11-211ENST00000547950 ZNF316A6NFI3 1004 aaPredicted RBP8.66□□□□□ -1.02
SCAF11-211ENST00000547950 ANP32CO43423 234 aa8.66□□□□□ -1.02
SCAF11-211ENST00000547950 AOC3Q16853 763 aa8.66□□□□□ -1.02
SCAF11-211ENST00000547950 DPP8Q6V1X1 898 aaPredicted RBP8.66□□□□□ -1.02
SCAF11-211ENST00000547950 PNMA8AQ86V59 439 aaPredicted RBP8.66□□□□□ -1.02
SCAF11-211ENST00000547950 LDHDQ86WU2 507 aa8.66□□□□□ -1.02
SCAF11-211ENST00000547950 SP8Q8IXZ3 490 aa8.66□□□□□ -1.02
SCAF11-211ENST00000547950 NIM1KQ8IY84 436 aa8.66□□□□□ -1.02
SCAF11-211ENST00000547950 MPNDQ8N594 471 aa8.66□□□□□ -1.02
SCAF11-211ENST00000547950 TSPYL6Q8N831 410 aa8.66□□□□□ -1.02
SCAF11-211ENST00000547950 TSR2Q969E8 191 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms