RNA–Protein interactions for RNA: ENST00000547555.5

LETMD1-210, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 1,658 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-210ENST00000547555 AMIGO3Q86WK7 504 aa20.54■□□□□ 0.88
LETMD1-210ENST00000547555 BCORQ6W2J9 1755 aa20.53■□□□□ 0.88
LETMD1-210ENST00000547555 PIP4K2AP48426 406 aaPredicted RBP20.53■□□□□ 0.88
LETMD1-210ENST00000547555 SRCIN1Q9C0H9 1055 aa20.53■□□□□ 0.88
LETMD1-210ENST00000547555 C1orf115Q9H7X2 142 aa20.53■□□□□ 0.88
LETMD1-210ENST00000547555 STK32BQ9NY57 414 aa20.53■□□□□ 0.88
LETMD1-210ENST00000547555 RTCBQ9Y3I0 505 aaKnown RBP20.53■□□□□ 0.88
LETMD1-210ENST00000547555 COL15A1P39059 1388 aa20.53■□□□□ 0.88
LETMD1-210ENST00000547555 SCN7AQ01118 1682 aa20.52■□□□□ 0.88
LETMD1-210ENST00000547555 ADRA2BP18089 450 aa20.51■□□□□ 0.87
LETMD1-210ENST00000547555 CCDC94Q9BW85 323 aaPredicted RBP20.51■□□□□ 0.87
LETMD1-210ENST00000547555 STK31Q9BXU1 1019 aa20.51■□□□□ 0.87
LETMD1-210ENST00000547555 WDR33Q9C0J8 1336 aaKnown RBP20.51■□□□□ 0.87
LETMD1-210ENST00000547555 ANXA1P04083 346 aa20.51■□□□□ 0.87
LETMD1-210ENST00000547555 PIBF1Q8WXW3 757 aa20.51■□□□□ 0.87
LETMD1-210ENST00000547555 HYPKQ9NX55 129 aa20.51■□□□□ 0.87
LETMD1-210ENST00000547555 MYL6BP14649 208 aa20.5■□□□□ 0.87
LETMD1-210ENST00000547555 TMX3Q96JJ7 454 aa20.5■□□□□ 0.87
LETMD1-210ENST00000547555 FAM13BQ9NYF5 915 aa20.5■□□□□ 0.87
LETMD1-210ENST00000547555 TFCP2L1Q9NZI6 479 aa20.5■□□□□ 0.87
LETMD1-210ENST00000547555 N4BP2Q86UW6 1770 aaPredicted RBP20.5■□□□□ 0.87
LETMD1-210ENST00000547555 CASZ1Q86V15 1759 aa20.5■□□□□ 0.87
LETMD1-210ENST00000547555 PNPLA7Q6ZV29 1317 aa20.49■□□□□ 0.87
LETMD1-210ENST00000547555 SYCE3A1L190 88 aa20.49■□□□□ 0.87
LETMD1-210ENST00000547555 CCT4P50991 539 aaKnown RBP20.49■□□□□ 0.87
LETMD1-210ENST00000547555 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.48■□□□□ 0.87
LETMD1-210ENST00000547555 PRDM4Q9UKN5 801 aa20.48■□□□□ 0.87
LETMD1-210ENST00000547555 SLC4A2P04920 1241 aa20.48■□□□□ 0.87
LETMD1-210ENST00000547555 SMIM5Q71RC9 77 aa20.48■□□□□ 0.87
LETMD1-210ENST00000547555 FLAD1Q8NFF5 587 aa20.48■□□□□ 0.87
LETMD1-210ENST00000547555 SPTLC3Q9NUV7 552 aa20.48■□□□□ 0.87
LETMD1-210ENST00000547555 ATP6V1DQ9Y5K8 247 aa20.48■□□□□ 0.87
LETMD1-210ENST00000547555 ARFGEF2Q9Y6D5 1785 aa20.47■□□□□ 0.87
LETMD1-210ENST00000547555 ZGPATQ8N5A5 531 aaKnown RBP20.47■□□□□ 0.87
LETMD1-210ENST00000547555 NUP98P52948 1817 aa20.46■□□□□ 0.87
LETMD1-210ENST00000547555 A0A087WZG4 1122 aa20.46■□□□□ 0.87
LETMD1-210ENST00000547555 PDE1AP54750 535 aa20.46■□□□□ 0.87
LETMD1-210ENST00000547555 ARHGEF1Q92888 912 aaKnown RBP20.46■□□□□ 0.87
LETMD1-210ENST00000547555 PTMAP06454 111 aaKnown RBP20.45■□□□□ 0.86
LETMD1-210ENST00000547555 TRAPPC3LQ5T215 181 aa20.45■□□□□ 0.86
LETMD1-210ENST00000547555 XAGE3Q8WTP9 111 aa20.45■□□□□ 0.86
LETMD1-210ENST00000547555 PHAXQ9H814 394 aaKnown RBP20.45■□□□□ 0.86
LETMD1-210ENST00000547555 STAP2Q9UGK3 403 aa20.45■□□□□ 0.86
LETMD1-210ENST00000547555 ZNF330Q9Y3S2 320 aaPredicted RBP20.45■□□□□ 0.86
LETMD1-210ENST00000547555 SALL3Q9BXA9 1300 aa20.45■□□□□ 0.86
LETMD1-210ENST00000547555 NEK4P51957 841 aa20.45■□□□□ 0.86
LETMD1-210ENST00000547555 PKP1Q13835 747 aa20.45■□□□□ 0.86
LETMD1-210ENST00000547555 CCDC183Q5T5S1 534 aa20.45■□□□□ 0.86
LETMD1-210ENST00000547555 COPS6Q7L5N1 327 aa20.45■□□□□ 0.86
LETMD1-210ENST00000547555 G2E3Q7L622 706 aa20.45■□□□□ 0.86
LETMD1-210ENST00000547555 DZIP3Q86Y13 1208 aaKnown RBP20.45■□□□□ 0.86
LETMD1-210ENST00000547555 COL23A1Q86Y22 540 aaPredicted RBP20.45■□□□□ 0.86
LETMD1-210ENST00000547555 ESYT1Q9BSJ8 1104 aa20.45■□□□□ 0.86
LETMD1-210ENST00000547555 GTPBP4Q9BZE4 634 aaKnown RBP20.45■□□□□ 0.86
LETMD1-210ENST00000547555 ANKRD36CQ5JPF3 1778 aa20.44■□□□□ 0.86
LETMD1-210ENST00000547555 USP42Q9H9J4 1324 aaKnown RBP20.44■□□□□ 0.86
LETMD1-210ENST00000547555 FLIIQ13045 1269 aa20.44■□□□□ 0.86
LETMD1-210ENST00000547555 TTLL7Q6ZT98 887 aa20.44■□□□□ 0.86
LETMD1-210ENST00000547555 USP25Q9UHP3 1055 aa20.44■□□□□ 0.86
LETMD1-210ENST00000547555 RGL2O15211 777 aa20.43■□□□□ 0.86
LETMD1-210ENST00000547555 NARFQ9UHQ1 456 aa20.43■□□□□ 0.86
LETMD1-210ENST00000547555 COL24A1Q17RW2 1714 aa20.43■□□□□ 0.86
LETMD1-210ENST00000547555 MAP3K15Q6ZN16 1313 aa20.43■□□□□ 0.86
LETMD1-210ENST00000547555 CAMTA2O94983 1202 aa20.42■□□□□ 0.86
LETMD1-210ENST00000547555 RFC4P35249 363 aa20.42■□□□□ 0.86
LETMD1-210ENST00000547555 DIAPH3Q9NSV4 1193 aa20.42■□□□□ 0.86
LETMD1-210ENST00000547555 RBM27Q9P2N5 1060 aaKnown RBP20.42■□□□□ 0.86
LETMD1-210ENST00000547555 TBC1D2BQ9UPU7 963 aa20.42■□□□□ 0.86
LETMD1-210ENST00000547555 ERVV-1B6SEH8 477 aa20.41■□□□□ 0.86
LETMD1-210ENST00000547555 AIMP1Q12904 312 aaKnown RBP20.41■□□□□ 0.86
LETMD1-210ENST00000547555 FKBP5Q13451 457 aaPredicted RBP20.41■□□□□ 0.86
LETMD1-210ENST00000547555 R3HDM1Q15032 1099 aaKnown RBP20.41■□□□□ 0.86
LETMD1-210ENST00000547555 KIF6Q6ZMV9 814 aa20.41■□□□□ 0.86
LETMD1-210ENST00000547555 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.41■□□□□ 0.864e-7■■■■□ 21.7
LETMD1-210ENST00000547555 PXDNLA1KZ92 1463 aa20.4■□□□□ 0.86
LETMD1-210ENST00000547555 GNAI3P08754 354 aa20.4■□□□□ 0.86
LETMD1-210ENST00000547555 MX1P20591 662 aa20.4■□□□□ 0.86
LETMD1-210ENST00000547555 RBM10P98175 930 aaKnown RBP20.4■□□□□ 0.86
LETMD1-210ENST00000547555 NOLC1Q14978 699 aaKnown RBP eCLIP20.4■□□□□ 0.868e-7■■■□□ 17.6
LETMD1-210ENST00000547555 SYCP1Q15431 976 aa20.4■□□□□ 0.86
LETMD1-210ENST00000547555 PLBD2Q8NHP8 589 aa20.4■□□□□ 0.86
LETMD1-210ENST00000547555 SRP68Q9UHB9 627 aaKnown RBP20.4■□□□□ 0.86
LETMD1-210ENST00000547555 ADCY9O60503 1353 aa20.4■□□□□ 0.86
LETMD1-210ENST00000547555 UBE2HP62256 183 aa20.39■□□□□ 0.86
LETMD1-210ENST00000547555 ANKRD13DQ6ZTN6 518 aa20.39■□□□□ 0.86
LETMD1-210ENST00000547555 GOLGA6L6A8MZA4 724 aa20.38■□□□□ 0.85
LETMD1-210ENST00000547555 ZPR1O75312 459 aa20.38■□□□□ 0.85
LETMD1-210ENST00000547555 KIF20AO95235 890 aa20.38■□□□□ 0.85
LETMD1-210ENST00000547555 DDX58O95786 925 aaKnown RBP20.38■□□□□ 0.85
LETMD1-210ENST00000547555 GNAI2P04899 355 aa20.38■□□□□ 0.85
LETMD1-210ENST00000547555 USPL1Q5W0Q7 1092 aa20.38■□□□□ 0.85
LETMD1-210ENST00000547555 C16orf71Q8IYS4 520 aaPredicted RBP20.38■□□□□ 0.85
LETMD1-210ENST00000547555 PDGFDQ9GZP0 370 aaPredicted RBP20.38■□□□□ 0.85
LETMD1-210ENST00000547555 BCL2L12Q9HB09 334 aa20.38■□□□□ 0.85
LETMD1-210ENST00000547555 GYS1P13807 737 aa20.38■□□□□ 0.85
LETMD1-210ENST00000547555 DMTNQ08495 405 aa20.38■□□□□ 0.85
LETMD1-210ENST00000547555 CLEC4GQ6UXB4 293 aa20.38■□□□□ 0.85
LETMD1-210ENST00000547555 KSR2Q6VAB6 950 aa20.38■□□□□ 0.85
LETMD1-210ENST00000547555 SLC16A10Q8TF71 515 aa20.38■□□□□ 0.85
LETMD1-210ENST00000547555 ZBTB3Q9H5J0 574 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms