RNA–Protein interactions for RNA: ENST00000546911.5

LINC02396-201, Transcript of long intergenic non-protein coding RNA 2396, humanhuman

TSL 3

Gene LINC02396, Length 300 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02396-201ENST00000546911 SMC1BQ8NDV3 1235 aa12.54□□□□□ -0.4
LINC02396-201ENST00000546911 JARID2Q92833 1246 aaPredicted RBP12.54□□□□□ -0.4
LINC02396-201ENST00000546911 L3MBTL3Q96JM7 780 aaPredicted RBP12.54□□□□□ -0.4
LINC02396-201ENST00000546911 MYH16Q9H6N6 1097 aa12.54□□□□□ -0.4
LINC02396-201ENST00000546911 CACNA1SQ13698 1873 aa12.54□□□□□ -0.4
LINC02396-201ENST00000546911 ZNF521Q96K83 1311 aa12.54□□□□□ -0.4
LINC02396-201ENST00000546911 DICER1Q9UPY3 1922 aaKnown RBP12.54□□□□□ -0.4
LINC02396-201ENST00000546911 PDE8AO60658 829 aa12.53□□□□□ -0.4
LINC02396-201ENST00000546911 APLP1P51693 650 aa12.53□□□□□ -0.4
LINC02396-201ENST00000546911 RPS8P62241 208 aaKnown RBP12.53□□□□□ -0.4
LINC02396-201ENST00000546911 NEXNQ0ZGT2 675 aa12.53□□□□□ -0.4
LINC02396-201ENST00000546911 FLIIQ13045 1269 aa12.53□□□□□ -0.4
LINC02396-201ENST00000546911 DPP8Q6V1X1 898 aaPredicted RBP12.53□□□□□ -0.4
LINC02396-201ENST00000546911 LARGE2Q8N3Y3 721 aa12.53□□□□□ -0.4
LINC02396-201ENST00000546911 SUPT20HQ8NEM7 779 aa12.53□□□□□ -0.4
LINC02396-201ENST00000546911 CELF1Q92879 486 aaKnown RBP12.53□□□□□ -0.4
LINC02396-201ENST00000546911 ZNF541Q9H0D2 1346 aa12.53□□□□□ -0.4
LINC02396-201ENST00000546911 ANKRD36CQ5JPF3 1778 aa12.53□□□□□ -0.4
LINC02396-201ENST00000546911 IQCA1LA6NCM1 817 aa12.52□□□□□ -0.41
LINC02396-201ENST00000546911 EIF6P56537 245 aaKnown RBP12.52□□□□□ -0.41
LINC02396-201ENST00000546911 GPC2Q8N158 579 aa12.52□□□□□ -0.41
LINC02396-201ENST00000546911 NEURL1BA8MQ27 555 aa12.51□□□□□ -0.41
LINC02396-201ENST00000546911 H7C1W4 665 aa12.51□□□□□ -0.41
LINC02396-201ENST00000546911 CCER2I3L3R5 266 aa12.51□□□□□ -0.41
LINC02396-201ENST00000546911 PPIP5K2O43314 1243 aa12.51□□□□□ -0.41
LINC02396-201ENST00000546911 AOC3Q16853 763 aa12.51□□□□□ -0.41
LINC02396-201ENST00000546911 CWF19L2Q2TBE0 894 aaKnown RBP12.51□□□□□ -0.41
LINC02396-201ENST00000546911 DNAJC5GQ8N7S2 189 aa12.51□□□□□ -0.41
LINC02396-201ENST00000546911 TAF1DQ9H5J8 278 aaPredicted RBP12.51□□□□□ -0.41
LINC02396-201ENST00000546911 SEC31BQ9NQW1 1179 aa12.51□□□□□ -0.41
LINC02396-201ENST00000546911 WDR90Q96KV7 1748 aa12.51□□□□□ -0.41
LINC02396-201ENST00000546911 KIAA2012Q0VF49 1180 aa12.5□□□□□ -0.41
LINC02396-201ENST00000546911 FKBP5Q13451 457 aaPredicted RBP12.5□□□□□ -0.41
LINC02396-201ENST00000546911 CCDC152Q4G0S7 254 aa12.5□□□□□ -0.41
LINC02396-201ENST00000546911 NIM1KQ8IY84 436 aa12.5□□□□□ -0.41
LINC02396-201ENST00000546911 DNAAF4Q8WXU2 420 aa12.5□□□□□ -0.41
LINC02396-201ENST00000546911 HACL1Q9UJ83 578 aa12.5□□□□□ -0.41
LINC02396-201ENST00000546911 NSFL1CQ9UNZ2 370 aaKnown RBP12.5□□□□□ -0.41
LINC02396-201ENST00000546911 CDHR2Q9BYE9 1310 aa12.5□□□□□ -0.41
LINC02396-201ENST00000546911 POTEIP0CG38 1075 aa12.49□□□□□ -0.41
LINC02396-201ENST00000546911 POTEJP0CG39 1038 aa12.49□□□□□ -0.41
LINC02396-201ENST00000546911 GCKRQ14397 625 aa12.49□□□□□ -0.41
LINC02396-201ENST00000546911 CHADLQ6NUI6 762 aa12.49□□□□□ -0.41
LINC02396-201ENST00000546911 LINS1Q8NG48 757 aa12.49□□□□□ -0.41
LINC02396-201ENST00000546911 TTLL11Q8NHH1 800 aa12.49□□□□□ -0.41
LINC02396-201ENST00000546911 POLLQ9UGP5 575 aa12.49□□□□□ -0.41
LINC02396-201ENST00000546911 ZNRF3Q9ULT6 936 aa12.49□□□□□ -0.41
LINC02396-201ENST00000546911 GJA3Q9Y6H8 435 aa12.49□□□□□ -0.41
LINC02396-201ENST00000546911 TIAM2Q8IVF5 1701 aa12.48□□□□□ -0.41
LINC02396-201ENST00000546911 EPHX2P34913 555 aa12.48□□□□□ -0.41
LINC02396-201ENST00000546911 GPSM2P81274 684 aa12.48□□□□□ -0.41
LINC02396-201ENST00000546911 CXCL9Q07325 125 aa12.48□□□□□ -0.41
LINC02396-201ENST00000546911 COL4A5P29400 1685 aa12.48□□□□□ -0.41
LINC02396-201ENST00000546911 E9PSI1 815 aa12.47□□□□□ -0.41
LINC02396-201ENST00000546911 F6X3S4 739 aa12.47□□□□□ -0.41
LINC02396-201ENST00000546911 C6orf229H3BNL8 230 aa12.47□□□□□ -0.41
LINC02396-201ENST00000546911 CASP7P55210 303 aa12.47□□□□□ -0.41
LINC02396-201ENST00000546911 CTSWP56202 376 aa12.47□□□□□ -0.41
LINC02396-201ENST00000546911 HTRA3P83110 453 aa12.47□□□□□ -0.41
LINC02396-201ENST00000546911 SLFN5Q08AF3 891 aa12.47□□□□□ -0.41
LINC02396-201ENST00000546911 WASHC4Q2M389 1173 aa12.47□□□□□ -0.41
LINC02396-201ENST00000546911 BEND3Q5T5X7 828 aa12.47□□□□□ -0.41
LINC02396-201ENST00000546911 UBE3BQ7Z3V4 1068 aa12.47□□□□□ -0.41
LINC02396-201ENST00000546911 PNMA8AQ86V59 439 aaPredicted RBP12.47□□□□□ -0.41
LINC02396-201ENST00000546911 LDHDQ86WU2 507 aa12.47□□□□□ -0.41
LINC02396-201ENST00000546911 CCDC85AQ96PX6 553 aaPredicted RBP12.47□□□□□ -0.41
LINC02396-201ENST00000546911 PLA2G12BQ9BX93 195 aa12.47□□□□□ -0.41
LINC02396-201ENST00000546911 PODXL2Q9NZ53 605 aa12.47□□□□□ -0.41
LINC02396-201ENST00000546911 LAMB2P55268 1798 aa12.47□□□□□ -0.41
LINC02396-201ENST00000546911 DDX60Q8IY21 1712 aaKnown RBP12.47□□□□□ -0.41
LINC02396-201ENST00000546911 TAF1P21675 1872 aa12.46□□□□□ -0.41
LINC02396-201ENST00000546911 CSF1RP07333 972 aa12.46□□□□□ -0.41
LINC02396-201ENST00000546911 EPS15P42566 896 aa12.46□□□□□ -0.41
LINC02396-201ENST00000546911 SCNN1DP51172 638 aa12.46□□□□□ -0.41
LINC02396-201ENST00000546911 ANKRD18AQ8IVF6 992 aa12.46□□□□□ -0.41
LINC02396-201ENST00000546911 TRMT2AQ8IZ69 625 aaKnown RBP12.46□□□□□ -0.41
LINC02396-201ENST00000546911 TBC1D16Q8TBP0 767 aa12.46□□□□□ -0.41
LINC02396-201ENST00000546911 YDJCA8MPS7 323 aa12.45□□□□□ -0.42
LINC02396-201ENST00000546911 RIMBP2O15034 1052 aa12.45□□□□□ -0.42
LINC02396-201ENST00000546911 TNIP1Q15025 636 aa12.45□□□□□ -0.42
LINC02396-201ENST00000546911 EAPPQ56P03 285 aaPredicted RBP12.45□□□□□ -0.42
LINC02396-201ENST00000546911 CIAPIN1Q6FI81 312 aa12.45□□□□□ -0.42
LINC02396-201ENST00000546911 CDCA7LQ96GN5 454 aa12.45□□□□□ -0.42
LINC02396-201ENST00000546911 CDC5LQ99459 802 aaKnown RBP12.45□□□□□ -0.42
LINC02396-201ENST00000546911 EYA3Q99504 573 aa12.45□□□□□ -0.42
LINC02396-201ENST00000546911 GREM2Q9H772 168 aa12.45□□□□□ -0.42
LINC02396-201ENST00000546911 BSDC1Q9NW68 430 aaPredicted RBP12.45□□□□□ -0.42
LINC02396-201ENST00000546911 CLEC11AQ9Y240 323 aa12.45□□□□□ -0.42
LINC02396-201ENST00000546911 RAD17O75943 681 aa12.44□□□□□ -0.42
LINC02396-201ENST00000546911 ITGBL1O95965 494 aaPredicted RBP12.44□□□□□ -0.42
LINC02396-201ENST00000546911 LMOD1P29536 600 aaPredicted RBP12.44□□□□□ -0.42
LINC02396-201ENST00000546911 MRPL50Q8N5N7 158 aaKnown RBP12.44□□□□□ -0.42
LINC02396-201ENST00000546911 ZC3H12CQ9C0D7 883 aaKnown RBP12.44□□□□□ -0.42
LINC02396-201ENST00000546911 GPRC5DQ9NZD1 345 aa12.44□□□□□ -0.42
LINC02396-201ENST00000546911 ANKIB1Q9P2G1 1089 aa12.44□□□□□ -0.42
LINC02396-201ENST00000546911 MINPP1Q9UNW1 487 aa12.44□□□□□ -0.42
LINC02396-201ENST00000546911 RTL9Q8NET4 1388 aa12.43□□□□□ -0.42
LINC02396-201ENST00000546911 CACNA1FO60840 1977 aa12.43□□□□□ -0.42
LINC02396-201ENST00000546911 COL4A1P02462 1669 aa12.43□□□□□ -0.42
LINC02396-201ENST00000546911 GMPSP49915 693 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms