RNA–Protein interactions for RNA: ENST00000546810.1

RAB5B-203, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-203ENST00000546810 NBPF10Q6P3W6 841 aaKnown RBP17.3■□□□□ 0.36
RAB5B-203ENST00000546810 NUTM1Q86Y26 1132 aa17.3■□□□□ 0.36
RAB5B-203ENST00000546810 NBPF15Q8N660 670 aa17.3■□□□□ 0.36
RAB5B-203ENST00000546810 NYXQ9GZU5 481 aa17.3■□□□□ 0.36
RAB5B-203ENST00000546810 PGAP2Q9UHJ9 254 aa17.3■□□□□ 0.36
RAB5B-203ENST00000546810 HOXA10P31260 410 aaPredicted RBP17.29■□□□□ 0.36
RAB5B-203ENST00000546810 SLC51AQ86UW1 340 aa17.29■□□□□ 0.36
RAB5B-203ENST00000546810 MYH16Q9H6N6 1097 aa17.29■□□□□ 0.36
RAB5B-203ENST00000546810 MBIPQ9NS73 344 aa17.29■□□□□ 0.36
RAB5B-203ENST00000546810 TCERG1O14776 1098 aaKnown RBP17.28■□□□□ 0.36
RAB5B-203ENST00000546810 PPEF1O14829 653 aaPredicted RBP17.28■□□□□ 0.36
RAB5B-203ENST00000546810 GMPSP49915 693 aaPredicted RBP17.28■□□□□ 0.36
RAB5B-203ENST00000546810 AOC3Q16853 763 aa17.28■□□□□ 0.36
RAB5B-203ENST00000546810 CDC37L1Q7L3B6 337 aa17.28■□□□□ 0.36
RAB5B-203ENST00000546810 ZC3H15Q8WU90 426 aaKnown RBP17.28■□□□□ 0.36
RAB5B-203ENST00000546810 HUNKP57058 714 aa17.27■□□□□ 0.36
RAB5B-203ENST00000546810 HNRNPUQ00839 825 aaKnown RBP eCLIP17.27■□□□□ 0.36
RAB5B-203ENST00000546810 CXCL9Q07325 125 aa17.27■□□□□ 0.36
RAB5B-203ENST00000546810 GOLGA2Q08379 1002 aa17.27■□□□□ 0.36
RAB5B-203ENST00000546810 RBM17Q96I25 401 aaKnown RBP17.27■□□□□ 0.36
RAB5B-203ENST00000546810 CRAMP1Q96RY5 1269 aa17.27■□□□□ 0.36
RAB5B-203ENST00000546810 SAGE1Q9NXZ1 904 aa17.27■□□□□ 0.36
RAB5B-203ENST00000546810 CHMP4AQ9BY43 222 aa17.26■□□□□ 0.35
RAB5B-203ENST00000546810 VPS33BQ9H267 617 aa17.26■□□□□ 0.35
RAB5B-203ENST00000546810 ZNRF3Q9ULT6 936 aa17.26■□□□□ 0.35
RAB5B-203ENST00000546810 RIC1Q4ADV7 1423 aa17.26■□□□□ 0.35
RAB5B-203ENST00000546810 ZNF521Q96K83 1311 aa17.25■□□□□ 0.35
RAB5B-203ENST00000546810 HOXB7P09629 217 aa17.25■□□□□ 0.35
RAB5B-203ENST00000546810 HIRAP54198 1017 aaPredicted RBP17.25■□□□□ 0.35
RAB5B-203ENST00000546810 TMX4Q9H1E5 349 aaPredicted RBP17.25■□□□□ 0.35
RAB5B-203ENST00000546810 KDM3BQ7LBC6 1761 aa17.25■□□□□ 0.35
RAB5B-203ENST00000546810 CDHR2Q9BYE9 1310 aa17.24■□□□□ 0.35
RAB5B-203ENST00000546810 E9PSI1 815 aa17.24■□□□□ 0.35
RAB5B-203ENST00000546810 TRPM4Q8TD43 1214 aa17.24■□□□□ 0.35
RAB5B-203ENST00000546810 BCL2L13Q9BXK5 485 aa17.24■□□□□ 0.35
RAB5B-203ENST00000546810 FAM155AB1AL88 458 aaPredicted RBP17.23■□□□□ 0.35
RAB5B-203ENST00000546810 RGMBQ6NW40 437 aa17.23■□□□□ 0.35
RAB5B-203ENST00000546810 USP48Q86UV5 1035 aa17.23■□□□□ 0.35
RAB5B-203ENST00000546810 SUPT20HQ8NEM7 779 aa17.23■□□□□ 0.35
RAB5B-203ENST00000546810 TSR2Q969E8 191 aaKnown RBP17.23■□□□□ 0.35
RAB5B-203ENST00000546810 RNF186Q9NXI6 227 aa17.23■□□□□ 0.35
RAB5B-203ENST00000546810 FANCIQ9NVI1 1328 aa17.22■□□□□ 0.35
RAB5B-203ENST00000546810 ERVV-1B6SEH8 477 aa17.22■□□□□ 0.35
RAB5B-203ENST00000546810 TRPA1O75762 1119 aa17.22■□□□□ 0.35
RAB5B-203ENST00000546810 EIF2S2P20042 333 aaKnown RBP17.22■□□□□ 0.35
RAB5B-203ENST00000546810 KIF23Q02241 960 aaPredicted RBP17.22■□□□□ 0.35
RAB5B-203ENST00000546810 DUSP27Q5VZP5 1158 aa17.22■□□□□ 0.35
RAB5B-203ENST00000546810 CTU1Q7Z7A3 348 aaKnown RBP17.22■□□□□ 0.35
RAB5B-203ENST00000546810 ATP6V0A2Q9Y487 856 aa17.22■□□□□ 0.35
RAB5B-203ENST00000546810 IBTKQ9P2D0 1353 aaPredicted RBP17.22■□□□□ 0.35
RAB5B-203ENST00000546810 ERBB4Q15303 1308 aa17.21■□□□□ 0.35
RAB5B-203ENST00000546810 RAD17O75943 681 aa17.21■□□□□ 0.35
RAB5B-203ENST00000546810 TNIP1Q15025 636 aa17.21■□□□□ 0.35
RAB5B-203ENST00000546810 SUSD4Q5VX71 490 aa17.21■□□□□ 0.35
RAB5B-203ENST00000546810 CCDC102AQ96A19 550 aa17.21■□□□□ 0.35
RAB5B-203ENST00000546810 RTFDC1Q9BY42 306 aaPredicted RBP17.21■□□□□ 0.35
RAB5B-203ENST00000546810 GPTP24298 496 aa17.2■□□□□ 0.34
RAB5B-203ENST00000546810 KRT24Q2M2I5 525 aa17.2■□□□□ 0.34
RAB5B-203ENST00000546810 HDGFL1Q5TGJ6 251 aa17.2■□□□□ 0.34
RAB5B-203ENST00000546810 DLK2Q6UY11 383 aa17.2■□□□□ 0.34
RAB5B-203ENST00000546810 C3orf67Q6ZVT6 689 aa17.2■□□□□ 0.34
RAB5B-203ENST00000546810 GBA2Q9HCG7 927 aaPredicted RBP17.2■□□□□ 0.34
RAB5B-203ENST00000546810 CNOT7Q9UIV1 285 aaKnown RBP17.2■□□□□ 0.34
RAB5B-203ENST00000546810 MAP3K15Q6ZN16 1313 aa17.2■□□□□ 0.34
RAB5B-203ENST00000546810 UBN2Q6ZU65 1347 aa17.2■□□□□ 0.34
RAB5B-203ENST00000546810 SHTN1A0MZ66 631 aa17.19■□□□□ 0.34
RAB5B-203ENST00000546810 H7C1D1 291 aa17.19■□□□□ 0.34
RAB5B-203ENST00000546810 ELL2O00472 640 aaPredicted RBP17.19■□□□□ 0.34
RAB5B-203ENST00000546810 ZNF157P51786 506 aaPredicted RBP17.19■□□□□ 0.34
RAB5B-203ENST00000546810 C2orf69Q8N8R5 385 aa17.19■□□□□ 0.34
RAB5B-203ENST00000546810 C8orf58Q8NAV2 365 aa17.19■□□□□ 0.34
RAB5B-203ENST00000546810 SPINK5Q9NQ38 1064 aaPredicted RBP17.19■□□□□ 0.34
RAB5B-203ENST00000546810 SLFN5Q08AF3 891 aa17.18■□□□□ 0.34
RAB5B-203ENST00000546810 KIAA2012Q0VF49 1180 aa17.18■□□□□ 0.34
RAB5B-203ENST00000546810 TWISTNBQ3B726 338 aaPredicted RBP17.18■□□□□ 0.34
RAB5B-203ENST00000546810 DPP8Q6V1X1 898 aaPredicted RBP17.18■□□□□ 0.34
RAB5B-203ENST00000546810 KIF6Q6ZMV9 814 aa17.18■□□□□ 0.34
RAB5B-203ENST00000546810 HPS5Q9UPZ3 1129 aa17.18■□□□□ 0.34
RAB5B-203ENST00000546810 NTSR2O95665 410 aa17.17■□□□□ 0.34
RAB5B-203ENST00000546810 CCDC30Q5VVM6 783 aa17.17■□□□□ 0.34
RAB5B-203ENST00000546810 TTLL7Q6ZT98 887 aa17.17■□□□□ 0.34
RAB5B-203ENST00000546810 KRT26Q7Z3Y9 468 aa17.17■□□□□ 0.34
RAB5B-203ENST00000546810 MICALL2Q8IY33 904 aa17.17■□□□□ 0.34
RAB5B-203ENST00000546810 NECTIN2Q92692 538 aa17.17■□□□□ 0.34
RAB5B-203ENST00000546810 GCC1Q96CN9 775 aa17.17■□□□□ 0.34
RAB5B-203ENST00000546810 NLRP3Q96P20 1036 aa17.17■□□□□ 0.34
RAB5B-203ENST00000546810 ZBED9Q6R2W3 1325 aa17.17■□□□□ 0.34
RAB5B-203ENST00000546810 MYL6BP14649 208 aa17.16■□□□□ 0.34
RAB5B-203ENST00000546810 EXOSC9Q06265 439 aaKnown RBP17.16■□□□□ 0.34
RAB5B-203ENST00000546810 MPNDQ8N594 471 aa17.16■□□□□ 0.34
RAB5B-203ENST00000546810 CSRNP1Q96S65 589 aa17.16■□□□□ 0.34
RAB5B-203ENST00000546810 ZBTB3Q9H5J0 574 aa17.16■□□□□ 0.34
RAB5B-203ENST00000546810 DBF4Q9UBU7 674 aaPredicted RBP17.16■□□□□ 0.34
RAB5B-203ENST00000546810 ABCC4O15439 1325 aa17.16■□□□□ 0.34
RAB5B-203ENST00000546810 SLC10A3P09131 477 aa17.15■□□□□ 0.34
RAB5B-203ENST00000546810 SAMD7Q7Z3H4 446 aa17.15■□□□□ 0.34
RAB5B-203ENST00000546810 PPP1R42Q7Z4L9 355 aa17.15■□□□□ 0.34
RAB5B-203ENST00000546810 ZNF34Q8IZ26 560 aa17.15■□□□□ 0.34
RAB5B-203ENST00000546810 TSPYL6Q8N831 410 aa17.15■□□□□ 0.34
RAB5B-203ENST00000546810 CDCA7LQ96GN5 454 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms