RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 ESYT1Q9BSJ8 1104 aa14.69□□□□□ -0.06
PTCH1-212ENST00000546744 KRT83P78385 493 aa14.69□□□□□ -0.06
PTCH1-212ENST00000546744 FAM76AQ8TAV0 307 aa14.69□□□□□ -0.06
PTCH1-212ENST00000546744 UBAC1Q9BSL1 405 aa14.69□□□□□ -0.06
PTCH1-212ENST00000546744 ASXL1Q8IXJ9 1541 aa14.69□□□□□ -0.06
PTCH1-212ENST00000546744 CEP152O94986 1710 aa14.68□□□□□ -0.06
PTCH1-212ENST00000546744 CACNA2D4Q7Z3S7 1137 aa14.68□□□□□ -0.06
PTCH1-212ENST00000546744 TTC14Q96N46 770 aa14.68□□□□□ -0.06
PTCH1-212ENST00000546744 GNL3LQ9NVN8 582 aaKnown RBP14.68□□□□□ -0.06
PTCH1-212ENST00000546744 RMND1Q9NWS8 449 aa14.68□□□□□ -0.06
PTCH1-212ENST00000546744 KIF1BO60333 1816 aa14.68□□□□□ -0.06
PTCH1-212ENST00000546744 SDSP20132 328 aa14.68□□□□□ -0.06
PTCH1-212ENST00000546744 SYT1P21579 422 aa14.68□□□□□ -0.06
PTCH1-212ENST00000546744 MYCBPQ99417 103 aaPredicted RBP14.68□□□□□ -0.06
PTCH1-212ENST00000546744 PRM3Q9NNZ6 103 aa14.68□□□□□ -0.06
PTCH1-212ENST00000546744 PTGS1P23219 599 aa14.68□□□□□ -0.06
PTCH1-212ENST00000546744 SH3BGRP55822 239 aaPredicted RBP14.68□□□□□ -0.06
PTCH1-212ENST00000546744 HLTFQ14527 1009 aaKnown RBP eCLIP14.68□□□□□ -0.06
PTCH1-212ENST00000546744 MSL1Q68DK7 614 aa14.68□□□□□ -0.06
PTCH1-212ENST00000546744 SPATS2Q86XZ4 545 aaKnown RBP14.68□□□□□ -0.06
PTCH1-212ENST00000546744 CEP126Q9P2H0 1117 aa14.68□□□□□ -0.06
PTCH1-212ENST00000546744 KRBA2Q6ZNG9 492 aa14.67□□□□□ -0.06
PTCH1-212ENST00000546744 RIMS2Q9UQ26 1411 aa14.67□□□□□ -0.06
PTCH1-212ENST00000546744 SOGA3Q5TF21 947 aa14.67□□□□□ -0.06
PTCH1-212ENST00000546744 VPS18Q9P253 973 aa14.67□□□□□ -0.06
PTCH1-212ENST00000546744 KRT86O43790 486 aa14.66□□□□□ -0.06
PTCH1-212ENST00000546744 CCDC155Q8N6L0 562 aa14.66□□□□□ -0.06
PTCH1-212ENST00000546744 CDK19Q9BWU1 502 aa14.66□□□□□ -0.06
PTCH1-212ENST00000546744 FMNL3Q8IVF7 1028 aa14.66□□□□□ -0.06
PTCH1-212ENST00000546744 RNF17Q9BXT8 1623 aaKnown RBP14.66□□□□□ -0.06
PTCH1-212ENST00000546744 MAP3K4Q9Y6R4 1608 aa14.66□□□□□ -0.06
PTCH1-212ENST00000546744 KIF5BP33176 963 aa14.66□□□□□ -0.06
PTCH1-212ENST00000546744 MAATS1Q7Z4T9 603 aa14.66□□□□□ -0.06
PTCH1-212ENST00000546744 RAB34Q9BZG1 259 aa14.66□□□□□ -0.06
PTCH1-212ENST00000546744 TFIP11Q9UBB9 837 aaKnown RBP14.66□□□□□ -0.06
PTCH1-212ENST00000546744 CNPY2Q9Y2B0 182 aa14.66□□□□□ -0.06
PTCH1-212ENST00000546744 COL17A1Q9UMD9 1497 aaPredicted RBP14.66□□□□□ -0.06
PTCH1-212ENST00000546744 AIMP1Q12904 312 aaKnown RBP14.66□□□□□ -0.06
PTCH1-212ENST00000546744 WAPLQ7Z5K2 1190 aa14.66□□□□□ -0.06
PTCH1-212ENST00000546744 LMTK2Q8IWU2 1503 aa14.66□□□□□ -0.06
PTCH1-212ENST00000546744 TACC1O75410 805 aa14.65□□□□□ -0.06
PTCH1-212ENST00000546744 SYKP43405 635 aa14.65□□□□□ -0.06
PTCH1-212ENST00000546744 VAV2P52735 878 aa14.65□□□□□ -0.06
PTCH1-212ENST00000546744 ANKRD36BQ8N2N9 1353 aa14.65□□□□□ -0.06
PTCH1-212ENST00000546744 NPC1L1Q9UHC9 1359 aa14.65□□□□□ -0.06
PTCH1-212ENST00000546744 EVCP57679 992 aa14.65□□□□□ -0.06
PTCH1-212ENST00000546744 SARNPP82979 210 aaKnown RBP14.65□□□□□ -0.06
PTCH1-212ENST00000546744 AKAP2Q9Y2D5 859 aa14.65□□□□□ -0.06
PTCH1-212ENST00000546744 ARHGAP31Q2M1Z3 1444 aa14.65□□□□□ -0.06
PTCH1-212ENST00000546744 PPRC1Q5VV67 1664 aaKnown RBP14.65□□□□□ -0.06
PTCH1-212ENST00000546744 PDE1AP54750 535 aa14.64□□□□□ -0.07
PTCH1-212ENST00000546744 BCL2L12Q9HB09 334 aa14.64□□□□□ -0.07
PTCH1-212ENST00000546744 U2AF2P26368 475 aaKnown RBP eCLIP14.64□□□□□ -0.07
PTCH1-212ENST00000546744 AMPD3Q01432 767 aa14.64□□□□□ -0.07
PTCH1-212ENST00000546744 CROCCP2Q86T23 111 aa14.64□□□□□ -0.07
PTCH1-212ENST00000546744 AFAP1L1Q8TED9 768 aa14.64□□□□□ -0.07
PTCH1-212ENST00000546744 ATRIPQ8WXE1 791 aa14.64□□□□□ -0.07
PTCH1-212ENST00000546744 NEK1Q96PY6 1258 aa14.64□□□□□ -0.07
PTCH1-212ENST00000546744 PUS7Q96PZ0 661 aaKnown RBP14.64□□□□□ -0.07
PTCH1-212ENST00000546744 PAIP2Q9BPZ3 127 aaKnown RBP14.64□□□□□ -0.07
PTCH1-212ENST00000546744 DNAJC25Q9H1X3 360 aa14.64□□□□□ -0.07
PTCH1-212ENST00000546744 DCTPP1Q9H773 170 aa14.64□□□□□ -0.07
PTCH1-212ENST00000546744 CCDC129Q6ZRS4 1044 aa14.64□□□□□ -0.07
PTCH1-212ENST00000546744 NUTM1Q86Y26 1132 aa14.64□□□□□ -0.07
PTCH1-212ENST00000546744 CCDC114Q96M63 670 aa14.64□□□□□ -0.07
PTCH1-212ENST00000546744 EFCC1Q9HA90 598 aa14.64□□□□□ -0.07
PTCH1-212ENST00000546744 JADE2Q9NQC1 790 aa14.64□□□□□ -0.07
PTCH1-212ENST00000546744 MYOM2P54296 1465 aa14.63□□□□□ -0.07
PTCH1-212ENST00000546744 CNGA4Q8IV77 575 aa14.63□□□□□ -0.07
PTCH1-212ENST00000546744 LRRC27Q9C0I9 530 aa14.63□□□□□ -0.07
PTCH1-212ENST00000546744 RAD50Q92878 1312 aa14.63□□□□□ -0.07
PTCH1-212ENST00000546744 N4BP3O15049 544 aa14.63□□□□□ -0.07
PTCH1-212ENST00000546744 SETSIPP0DME0 302 aa14.63□□□□□ -0.07
PTCH1-212ENST00000546744 INPP5BP32019 993 aa14.63□□□□□ -0.07
PTCH1-212ENST00000546744 ATP6V1AP38606 617 aa14.63□□□□□ -0.07
PTCH1-212ENST00000546744 PRPHP41219 470 aa14.63□□□□□ -0.07
PTCH1-212ENST00000546744 BRD3Q15059 726 aa14.63□□□□□ -0.07
PTCH1-212ENST00000546744 PLVAPQ9BX97 442 aa14.63□□□□□ -0.07
PTCH1-212ENST00000546744 MAP4K4O95819 1239 aaPredicted RBP14.63□□□□□ -0.07
PTCH1-212ENST00000546744 POTEJP0CG39 1038 aa14.63□□□□□ -0.07
PTCH1-212ENST00000546744 SYT10Q6XYQ8 523 aa14.63□□□□□ -0.07
PTCH1-212ENST00000546744 ANKRD62A6NC57 917 aa14.62□□□□□ -0.07
PTCH1-212ENST00000546744 SMARCA5O60264 1052 aaPredicted RBP14.62□□□□□ -0.07
PTCH1-212ENST00000546744 STAMBPO95630 424 aa14.62□□□□□ -0.07
PTCH1-212ENST00000546744 NLRP6P59044 892 aa14.62□□□□□ -0.07
PTCH1-212ENST00000546744 PPP2R3AQ06190 1150 aa14.62□□□□□ -0.07
PTCH1-212ENST00000546744 KLHL10Q6JEL2 608 aa14.62□□□□□ -0.07
PTCH1-212ENST00000546744 RPGRIP1Q96KN7 1286 aa14.62□□□□□ -0.07
PTCH1-212ENST00000546744 RNF41Q9H4P4 317 aaPredicted RBP14.62□□□□□ -0.07
PTCH1-212ENST00000546744 MAP2K2P36507 400 aa14.62□□□□□ -0.07
PTCH1-212ENST00000546744 AOPEPQ8N6M6 819 aa14.62□□□□□ -0.07
PTCH1-212ENST00000546744 ZBTB40Q9NUA8 1239 aa14.62□□□□□ -0.07
PTCH1-212ENST00000546744 CABP1Q9NZU7 370 aa14.62□□□□□ -0.07
PTCH1-212ENST00000546744 LIG1P18858 919 aa14.62□□□□□ -0.07
PTCH1-212ENST00000546744 IFT74Q96LB3 600 aa14.62□□□□□ -0.07
PTCH1-212ENST00000546744 SELENOOQ9BVL4 669 aa14.62□□□□□ -0.07
PTCH1-212ENST00000546744 USP26Q9BXU7 913 aa14.62□□□□□ -0.07
PTCH1-212ENST00000546744 ZSCAN26Q16670 478 aa14.62□□□□□ -0.07
PTCH1-212ENST00000546744 LARP1Q6PKG0 1096 aaKnown RBP14.62□□□□□ -0.07
PTCH1-212ENST00000546744 ZMYM4Q5VZL5 1548 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 551.9 ms