RNA–Protein interactions for RNA: ENST00000546443.5

CALCOCO1-203, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-203ENST00000546443 SYNE4Q8N205 404 aa18.49■□□□□ 0.55
CALCOCO1-203ENST00000546443 BTAF1O14981 1849 aa18.49■□□□□ 0.55
CALCOCO1-203ENST00000546443 HIP1O00291 1037 aa18.49■□□□□ 0.55
CALCOCO1-203ENST00000546443 CWC27Q6UX04 472 aaKnown RBP18.49■□□□□ 0.55
CALCOCO1-203ENST00000546443 PUS3Q9BZE2 481 aaKnown RBP18.49■□□□□ 0.55
CALCOCO1-203ENST00000546443 SNRKQ9NRH2 765 aa18.49■□□□□ 0.55
CALCOCO1-203ENST00000546443 LAMB2P55268 1798 aa18.49■□□□□ 0.55
CALCOCO1-203ENST00000546443 CAMTA2O94983 1202 aa18.48■□□□□ 0.55
CALCOCO1-203ENST00000546443 CCDC57Q2TAC2 916 aa18.48■□□□□ 0.55
CALCOCO1-203ENST00000546443 CIZ1Q9ULV3 898 aaPredicted RBP18.48■□□□□ 0.55
CALCOCO1-203ENST00000546443 RFX7Q2KHR2 1363 aa18.47■□□□□ 0.55
CALCOCO1-203ENST00000546443 ST18O60284 1047 aa18.47■□□□□ 0.55
CALCOCO1-203ENST00000546443 FRAT2O75474 233 aaPredicted RBP18.47■□□□□ 0.55
CALCOCO1-203ENST00000546443 TTLL11Q8NHH1 800 aa18.47■□□□□ 0.55
CALCOCO1-203ENST00000546443 DDX60Q8IY21 1712 aaKnown RBP18.46■□□□□ 0.55
CALCOCO1-203ENST00000546443 SBF2Q86WG5 1849 aa18.46■□□□□ 0.55
CALCOCO1-203ENST00000546443 IRS4O14654 1257 aaPredicted RBP18.46■□□□□ 0.55
CALCOCO1-203ENST00000546443 HAUS7Q99871 368 aa18.46■□□□□ 0.55
CALCOCO1-203ENST00000546443 LRP5O75197 1615 aa18.46■□□□□ 0.55
CALCOCO1-203ENST00000546443 SPEF2Q9C093 1822 aa18.46■□□□□ 0.55
CALCOCO1-203ENST00000546443 PDE8AO60658 829 aa18.45■□□□□ 0.54
CALCOCO1-203ENST00000546443 CTSWP56202 376 aa18.45■□□□□ 0.54
CALCOCO1-203ENST00000546443 NMIQ13287 307 aaPredicted RBP18.45■□□□□ 0.54
CALCOCO1-203ENST00000546443 IL27Q8NEV9 243 aa18.45■□□□□ 0.54
CALCOCO1-203ENST00000546443 TRMT112Q9UI30 125 aaKnown RBP18.45■□□□□ 0.54
CALCOCO1-203ENST00000546443 ATRNO75882 1429 aa18.45■□□□□ 0.54
CALCOCO1-203ENST00000546443 HSPA1LP34931 641 aa18.44■□□□□ 0.54
CALCOCO1-203ENST00000546443 IFIT5Q13325 482 aaKnown RBP18.44■□□□□ 0.54
CALCOCO1-203ENST00000546443 KIAA1211Q6ZU35 1233 aa18.44■□□□□ 0.54
CALCOCO1-203ENST00000546443 LINC00116Q8NCU8 138 aa18.44■□□□□ 0.54
CALCOCO1-203ENST00000546443 KCNB2Q92953 911 aa18.44■□□□□ 0.54
CALCOCO1-203ENST00000546443 FSD1Q9BTV5 496 aa18.44■□□□□ 0.54
CALCOCO1-203ENST00000546443 LY75O60449 1722 aa18.44■□□□□ 0.54
CALCOCO1-203ENST00000546443 RIC1Q4ADV7 1423 aa18.44■□□□□ 0.54
CALCOCO1-203ENST00000546443 MED23Q9ULK4 1368 aa18.44■□□□□ 0.54
CALCOCO1-203ENST00000546443 TIMM10P62072 90 aa18.44■□□□□ 0.54
CALCOCO1-203ENST00000546443 PTH1RQ03431 593 aa18.44■□□□□ 0.54
CALCOCO1-203ENST00000546443 SUSD4Q5VX71 490 aa18.44■□□□□ 0.54
CALCOCO1-203ENST00000546443 EDC3Q96F86 508 aaKnown RBP18.44■□□□□ 0.54
CALCOCO1-203ENST00000546443 AK7Q96M32 723 aa18.44■□□□□ 0.54
CALCOCO1-203ENST00000546443 FAM227BQ96M60 508 aa18.44■□□□□ 0.54
CALCOCO1-203ENST00000546443 GREM2Q9H772 168 aa18.44■□□□□ 0.54
CALCOCO1-203ENST00000546443 CEP126Q9P2H0 1117 aa18.44■□□□□ 0.54
CALCOCO1-203ENST00000546443 SCN7AQ01118 1682 aa18.43■□□□□ 0.54
CALCOCO1-203ENST00000546443 A0A1B0GUL7 405 aa18.43■□□□□ 0.54
CALCOCO1-203ENST00000546443 NEK4P51957 841 aa18.43■□□□□ 0.54
CALCOCO1-203ENST00000546443 PTF1AQ7RTS3 328 aa18.43■□□□□ 0.54
CALCOCO1-203ENST00000546443 GJD4Q96KN9 370 aaPredicted RBP18.43■□□□□ 0.54
CALCOCO1-203ENST00000546443 CCDC85AQ96PX6 553 aaPredicted RBP18.43■□□□□ 0.54
CALCOCO1-203ENST00000546443 RIPOR2Q9Y4F9 1068 aa18.43■□□□□ 0.54
CALCOCO1-203ENST00000546443 SNX14Q9Y5W7 946 aa18.43■□□□□ 0.54
CALCOCO1-203ENST00000546443 CNTNAP4Q9C0A0 1308 aa18.42■□□□□ 0.54
CALCOCO1-203ENST00000546443 A0A0D9SFI3 127 aa18.42■□□□□ 0.54
CALCOCO1-203ENST00000546443 ITGA6P23229 1130 aa18.42■□□□□ 0.54
CALCOCO1-203ENST00000546443 MCM2P49736 904 aa18.42■□□□□ 0.54
CALCOCO1-203ENST00000546443 MYT1Q01538 1121 aa18.42■□□□□ 0.54
CALCOCO1-203ENST00000546443 PARP10Q53GL7 1025 aa18.42■□□□□ 0.54
CALCOCO1-203ENST00000546443 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.42■□□□□ 0.54
CALCOCO1-203ENST00000546443 NEUROD6Q96NK8 337 aa18.42■□□□□ 0.54
CALCOCO1-203ENST00000546443 AFF2P51816 1311 aa18.42■□□□□ 0.54
CALCOCO1-203ENST00000546443 CCDC171Q6TFL3 1326 aa18.42■□□□□ 0.54
CALCOCO1-203ENST00000546443 TAF1LQ8IZX4 1826 aa18.41■□□□□ 0.54
CALCOCO1-203ENST00000546443 ANKRD18BA2A2Z9 1011 aa18.41■□□□□ 0.54
CALCOCO1-203ENST00000546443 ONECUT3O60422 494 aaPredicted RBP18.41■□□□□ 0.54
CALCOCO1-203ENST00000546443 TAF7LQ5H9L4 462 aa18.41■□□□□ 0.54
CALCOCO1-203ENST00000546443 MEX3CQ5U5Q3 659 aaKnown RBP18.41■□□□□ 0.54
CALCOCO1-203ENST00000546443 TICAM2Q86XR7 235 aa18.41■□□□□ 0.54
CALCOCO1-203ENST00000546443 AKAP2Q9Y2D5 859 aa18.41■□□□□ 0.54
CALCOCO1-203ENST00000546443 NECTIN1Q15223 517 aa18.4■□□□□ 0.54
CALCOCO1-203ENST00000546443 RASEFQ8IZ41 740 aa18.4■□□□□ 0.54
CALCOCO1-203ENST00000546443 UTP14AQ9BVJ6 771 aaKnown RBP18.4■□□□□ 0.54
CALCOCO1-203ENST00000546443 FOXD4L1Q9NU39 408 aa18.4■□□□□ 0.54
CALCOCO1-203ENST00000546443 SH3TC1Q8TE82 1336 aa18.4■□□□□ 0.54
CALCOCO1-203ENST00000546443 ARAP2Q8WZ64 1704 aa18.4■□□□□ 0.54
CALCOCO1-203ENST00000546443 CASZ1Q86V15 1759 aa18.4■□□□□ 0.54
CALCOCO1-203ENST00000546443 NTSR2O95665 410 aa18.39■□□□□ 0.54
CALCOCO1-203ENST00000546443 HSP90AA1P07900 732 aaKnown RBP18.39■□□□□ 0.54
CALCOCO1-203ENST00000546443 RC3H1Q5TC82 1133 aaKnown RBP18.39■□□□□ 0.54
CALCOCO1-203ENST00000546443 MAP4K1Q92918 833 aa18.39■□□□□ 0.54
CALCOCO1-203ENST00000546443 DNAJC2Q99543 621 aaKnown RBP18.39■□□□□ 0.54
CALCOCO1-203ENST00000546443 NDUFB9Q9Y6M9 179 aa18.39■□□□□ 0.54
CALCOCO1-203ENST00000546443 RGL2O15211 777 aa18.39■□□□□ 0.53
CALCOCO1-203ENST00000546443 RAB3GAP1Q15042 981 aa18.39■□□□□ 0.53
CALCOCO1-203ENST00000546443 KBTBD3Q8NAB2 608 aa18.39■□□□□ 0.53
CALCOCO1-203ENST00000546443 CUL4AQ13619 759 aa18.38■□□□□ 0.53
CALCOCO1-203ENST00000546443 CLEC4GQ6UXB4 293 aa18.38■□□□□ 0.53
CALCOCO1-203ENST00000546443 VGLL2Q8N8G2 317 aa18.38■□□□□ 0.53
CALCOCO1-203ENST00000546443 IFIT1P09914 478 aaKnown RBP18.37■□□□□ 0.53
CALCOCO1-203ENST00000546443 ADORA1P30542 326 aa18.37■□□□□ 0.53
CALCOCO1-203ENST00000546443 LDHAL6AQ6ZMR3 332 aa18.37■□□□□ 0.53
CALCOCO1-203ENST00000546443 XAGE2Q96GT9 111 aa18.37■□□□□ 0.53
CALCOCO1-203ENST00000546443 TMX3Q96JJ7 454 aa18.37■□□□□ 0.53
CALCOCO1-203ENST00000546443 TTC14Q96N46 770 aa18.37■□□□□ 0.53
CALCOCO1-203ENST00000546443 PAG1Q9NWQ8 432 aa18.37■□□□□ 0.53
CALCOCO1-203ENST00000546443 NIP7Q9Y221 180 aaKnown RBP eCLIP18.37■□□□□ 0.53
CALCOCO1-203ENST00000546443 RBM8AQ9Y5S9 174 aaKnown RBP18.37■□□□□ 0.53
CALCOCO1-203ENST00000546443 RTL9Q8NET4 1388 aa18.37■□□□□ 0.53
CALCOCO1-203ENST00000546443 ABCC12Q96J65 1359 aa18.37■□□□□ 0.53
CALCOCO1-203ENST00000546443 DDX46Q7L014 1031 aaKnown RBP18.36■□□□□ 0.53
CALCOCO1-203ENST00000546443 ZNF589Q86UQ0 364 aaPredicted RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms