RNA–Protein interactions for RNA: ENST00000546202.5

PPP1CA-211, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 4

Gene PPP1CA, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-211ENST00000546202 CSF1RP07333 972 aa20.37■□□□□ 0.85
PPP1CA-211ENST00000546202 KIF13BQ9NQT8 1826 aa20.37■□□□□ 0.85
PPP1CA-211ENST00000546202 NPHP1O15259 732 aa20.36■□□□□ 0.85
PPP1CA-211ENST00000546202 CTSWP56202 376 aa20.36■□□□□ 0.85
PPP1CA-211ENST00000546202 ST5P78524 1137 aa20.36■□□□□ 0.85
PPP1CA-211ENST00000546202 ATP8B2P98198 1209 aa20.36■□□□□ 0.85
PPP1CA-211ENST00000546202 SIRT2Q8IXJ6 389 aa20.36■□□□□ 0.85
PPP1CA-211ENST00000546202 KLHL34Q8N239 644 aa20.36■□□□□ 0.85
PPP1CA-211ENST00000546202 LMBR1LQ6UX01 489 aa20.35■□□□□ 0.85
PPP1CA-211ENST00000546202 PELP1Q8IZL8 1130 aaKnown RBP20.35■□□□□ 0.85
PPP1CA-211ENST00000546202 CCDC24Q8N4L8 307 aa20.35■□□□□ 0.85
PPP1CA-211ENST00000546202 TTLL11Q8NHH1 800 aa20.35■□□□□ 0.85
PPP1CA-211ENST00000546202 PPP4R2Q9NY27 417 aa20.35■□□□□ 0.85
PPP1CA-211ENST00000546202 SF3B3Q15393 1217 aaKnown RBP20.34■□□□□ 0.85
PPP1CA-211ENST00000546202 GTF3C3Q9Y5Q9 886 aa20.34■□□□□ 0.85
PPP1CA-211ENST00000546202 RTL9Q8NET4 1388 aa20.34■□□□□ 0.85
PPP1CA-211ENST00000546202 PNMA6EA0A0J9YXQ4 647 aa20.33■□□□□ 0.85
PPP1CA-211ENST00000546202 HDAC1Q13547 482 aaPredicted RBP20.33■□□□□ 0.85
PPP1CA-211ENST00000546202 POLA2Q14181 598 aa20.33■□□□□ 0.85
PPP1CA-211ENST00000546202 C3orf67Q6ZVT6 689 aa20.33■□□□□ 0.85
PPP1CA-211ENST00000546202 NLGN2Q8NFZ4 835 aa20.33■□□□□ 0.85
PPP1CA-211ENST00000546202 SSH3Q8TE77 659 aa20.33■□□□□ 0.85
PPP1CA-211ENST00000546202 NLRP3Q96P20 1036 aa20.33■□□□□ 0.85
PPP1CA-211ENST00000546202 BRIP1Q9BX63 1249 aa20.33■□□□□ 0.85
PPP1CA-211ENST00000546202 C10orf71Q711Q0 1435 aa20.33■□□□□ 0.84
PPP1CA-211ENST00000546202 KLRG2A4D1S0 409 aaPredicted RBP20.32■□□□□ 0.84
PPP1CA-211ENST00000546202 SRGAP3O43295 1099 aa20.32■□□□□ 0.84
PPP1CA-211ENST00000546202 POLD1P28340 1107 aa20.32■□□□□ 0.84
PPP1CA-211ENST00000546202 COL11A2P13942 1736 aaPredicted RBP20.32■□□□□ 0.84
PPP1CA-211ENST00000546202 CCDC152Q4G0S7 254 aa20.31■□□□□ 0.84
PPP1CA-211ENST00000546202 TAF1P21675 1872 aa20.3■□□□□ 0.84
PPP1CA-211ENST00000546202 HMMRO75330 724 aa20.3■□□□□ 0.84
PPP1CA-211ENST00000546202 RFX5P48382 616 aaPredicted RBP20.3■□□□□ 0.84
PPP1CA-211ENST00000546202 FAM161AQ3B820 660 aa20.3■□□□□ 0.84
PPP1CA-211ENST00000546202 CRY2Q49AN0 593 aa20.3■□□□□ 0.84
PPP1CA-211ENST00000546202 GREM2Q9H772 168 aa20.3■□□□□ 0.84
PPP1CA-211ENST00000546202 DLEC1Q9Y238 1755 aa20.29■□□□□ 0.84
PPP1CA-211ENST00000546202 RWDD1Q9H446 243 aaPredicted RBP20.29■□□□□ 0.84
PPP1CA-211ENST00000546202 SPEF2Q9C093 1822 aa20.29■□□□□ 0.84
PPP1CA-211ENST00000546202 KIAA1551Q9HCM1 1747 aa20.28■□□□□ 0.84
PPP1CA-211ENST00000546202 IGHDP01880 384 aa20.28■□□□□ 0.84
PPP1CA-211ENST00000546202 PDE6BP35913 854 aa20.28■□□□□ 0.84
PPP1CA-211ENST00000546202 CCDC136Q96JN2 1154 aa20.28■□□□□ 0.84
PPP1CA-211ENST00000546202 CCDC85AQ96PX6 553 aaPredicted RBP20.28■□□□□ 0.84
PPP1CA-211ENST00000546202 CHMP3Q9Y3E7 222 aa20.28■□□□□ 0.84
PPP1CA-211ENST00000546202 COL4A1P02462 1669 aa20.27■□□□□ 0.84
PPP1CA-211ENST00000546202 YBX3P16989 372 aaKnown RBP eCLIP20.27■□□□□ 0.841e-8■■■■□ 20.5
PPP1CA-211ENST00000546202 ITGA6P23229 1130 aa20.27■□□□□ 0.84
PPP1CA-211ENST00000546202 IFIT5Q13325 482 aaKnown RBP20.27■□□□□ 0.84
PPP1CA-211ENST00000546202 CCDC57Q2TAC2 916 aa20.27■□□□□ 0.84
PPP1CA-211ENST00000546202 COPRSQ9NQ92 184 aa20.27■□□□□ 0.84
PPP1CA-211ENST00000546202 CEP350Q5VT06 3117 aa20.27■□□□□ 0.84
PPP1CA-211ENST00000546202 PTPN12Q05209 780 aaKnown RBP20.26■□□□□ 0.83
PPP1CA-211ENST00000546202 PDZRN3Q9UPQ7 1066 aa20.26■□□□□ 0.83
PPP1CA-211ENST00000546202 ANKRD18BA2A2Z9 1011 aa20.25■□□□□ 0.83
PPP1CA-211ENST00000546202 HOXA10P31260 410 aaPredicted RBP20.25■□□□□ 0.83
PPP1CA-211ENST00000546202 B4GALNT3Q6L9W6 998 aa20.25■□□□□ 0.83
PPP1CA-211ENST00000546202 DCTPP1Q9H773 170 aa20.25■□□□□ 0.83
PPP1CA-211ENST00000546202 SEC31BQ9NQW1 1179 aa20.25■□□□□ 0.83
PPP1CA-211ENST00000546202 NOP58Q9Y2X3 529 aaKnown RBP20.25■□□□□ 0.83
PPP1CA-211ENST00000546202 KDM2BQ8NHM5 1336 aa20.25■□□□□ 0.83
PPP1CA-211ENST00000546202 SRGNP10124 158 aa20.24■□□□□ 0.83
PPP1CA-211ENST00000546202 RPGRQ92834 1020 aaKnown RBP20.24■□□□□ 0.83
PPP1CA-211ENST00000546202 CACNA1SQ13698 1873 aa20.23■□□□□ 0.83
PPP1CA-211ENST00000546202 DDX46Q7L014 1031 aaKnown RBP20.23■□□□□ 0.83
PPP1CA-211ENST00000546202 SMC5Q8IY18 1101 aa20.23■□□□□ 0.83
PPP1CA-211ENST00000546202 KLHDC4Q8TBB5 520 aa20.23■□□□□ 0.83
PPP1CA-211ENST00000546202 CDC5LQ99459 802 aaKnown RBP20.23■□□□□ 0.83
PPP1CA-211ENST00000546202 PA2G4Q9UQ80 394 aaKnown RBP20.23■□□□□ 0.83
PPP1CA-211ENST00000546202 A0A1B0GUL6 1792 aa20.23■□□□□ 0.83
PPP1CA-211ENST00000546202 NPR1P16066 1061 aa20.22■□□□□ 0.83
PPP1CA-211ENST00000546202 C2CD5Q86YS7 1000 aa20.22■□□□□ 0.83
PPP1CA-211ENST00000546202 GCC1Q96CN9 775 aa20.22■□□□□ 0.83
PPP1CA-211ENST00000546202 ZNF594Q96JF6 807 aaPredicted RBP20.22■□□□□ 0.83
PPP1CA-211ENST00000546202 CRAMP1Q96RY5 1269 aa20.22■□□□□ 0.83
PPP1CA-211ENST00000546202 FBXO3Q9UK99 471 aa20.22■□□□□ 0.83
PPP1CA-211ENST00000546202 H0YIN7 160 aa20.21■□□□□ 0.83
PPP1CA-211ENST00000546202 GRIN3BO60391 1043 aa20.21■□□□□ 0.83
PPP1CA-211ENST00000546202 SURF6O75683 361 aaKnown RBP20.21■□□□□ 0.83
PPP1CA-211ENST00000546202 TAF7LQ5H9L4 462 aa20.21■□□□□ 0.83
PPP1CA-211ENST00000546202 MASTLQ96GX5 879 aa20.21■□□□□ 0.83
PPP1CA-211ENST00000546202 RBM17Q96I25 401 aaKnown RBP20.21■□□□□ 0.83
PPP1CA-211ENST00000546202 CD2APQ9Y5K6 639 aa20.21■□□□□ 0.83
PPP1CA-211ENST00000546202 BRCA1P38398 1863 aaKnown RBP20.21■□□□□ 0.83
PPP1CA-211ENST00000546202 GOLGB1Q14789 3259 aaKnown RBP20.2■□□□□ 0.82
PPP1CA-211ENST00000546202 CIAO1O76071 339 aa20.2■□□□□ 0.82
PPP1CA-211ENST00000546202 GRAPQ13588 217 aa20.2■□□□□ 0.82
PPP1CA-211ENST00000546202 STYK1Q6J9G0 422 aa20.2■□□□□ 0.82
PPP1CA-211ENST00000546202 CENPQQ7L2Z9 268 aaPredicted RBP20.2■□□□□ 0.82
PPP1CA-211ENST00000546202 ANKRD18AQ8IVF6 992 aa20.2■□□□□ 0.82
PPP1CA-211ENST00000546202 GRAPLQ8TC17 118 aaPredicted RBP20.2■□□□□ 0.82
PPP1CA-211ENST00000546202 CELF1Q92879 486 aaKnown RBP20.2■□□□□ 0.82
PPP1CA-211ENST00000546202 EXOC6BQ9Y2D4 811 aa20.2■□□□□ 0.82
PPP1CA-211ENST00000546202 LRRC37AA6NMS7 1700 aa20.19■□□□□ 0.82
PPP1CA-211ENST00000546202 EYA2O00167 538 aa20.19■□□□□ 0.82
PPP1CA-211ENST00000546202 IGHMBP2P38935 993 aaKnown RBP20.19■□□□□ 0.82
PPP1CA-211ENST00000546202 TGFB2P61812 414 aa20.19■□□□□ 0.82
PPP1CA-211ENST00000546202 RPS8P62241 208 aaKnown RBP20.19■□□□□ 0.82
PPP1CA-211ENST00000546202 HSP90AB4PQ58FF6 505 aa20.19■□□□□ 0.82
PPP1CA-211ENST00000546202 ATG9AQ7Z3C6 839 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms