RNA–Protein interactions for RNA: ENST00000546006.5

CCDC189-212, Transcript of coiled-coil domain containing 189, humanhuman

TSL 2

Gene CCDC189, Length 1,533 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-212ENST00000546006 SRGNP10124 158 aa23.23■■□□□ 1.31
CCDC189-212ENST00000546006 RABL6Q3YEC7 729 aaPredicted RBP23.23■■□□□ 1.31
CCDC189-212ENST00000546006 CCDC152Q4G0S7 254 aa23.23■■□□□ 1.31
CCDC189-212ENST00000546006 CHRNA5P30532 468 aa23.23■■□□□ 1.31
CCDC189-212ENST00000546006 IRX6P78412 446 aaPredicted RBP23.23■■□□□ 1.31
CCDC189-212ENST00000546006 LMBR1LQ6UX01 489 aa23.23■■□□□ 1.31
CCDC189-212ENST00000546006 ANKRD44Q8N8A2 993 aa23.23■■□□□ 1.31
CCDC189-212ENST00000546006 MYH3P11055 1940 aa23.22■■□□□ 1.31
CCDC189-212ENST00000546006 NPR1P16066 1061 aa23.22■■□□□ 1.31
CCDC189-212ENST00000546006 DPEP1P16444 411 aa23.22■■□□□ 1.31
CCDC189-212ENST00000546006 RPGRQ92834 1020 aaKnown RBP23.22■■□□□ 1.31
CCDC189-212ENST00000546006 MASTLQ96GX5 879 aa23.22■■□□□ 1.31
CCDC189-212ENST00000546006 CCDC85AQ96PX6 553 aaPredicted RBP23.22■■□□□ 1.31
CCDC189-212ENST00000546006 C1orf115Q9H7X2 142 aa23.22■■□□□ 1.31
CCDC189-212ENST00000546006 COL11A2P13942 1736 aaPredicted RBP23.22■■□□□ 1.31
CCDC189-212ENST00000546006 KIAA1551Q9HCM1 1747 aa23.21■■□□□ 1.31
CCDC189-212ENST00000546006 A0A0G2JLW4 131 aa23.21■■□□□ 1.31
CCDC189-212ENST00000546006 HOXA10P31260 410 aaPredicted RBP23.21■■□□□ 1.31
CCDC189-212ENST00000546006 STYK1Q6J9G0 422 aa23.2■■□□□ 1.3
CCDC189-212ENST00000546006 NLGN2Q8NFZ4 835 aa23.2■■□□□ 1.3
CCDC189-212ENST00000546006 RBM17Q96I25 401 aaKnown RBP23.2■■□□□ 1.3
CCDC189-212ENST00000546006 SYT17Q9BSW7 474 aa23.2■■□□□ 1.3
CCDC189-212ENST00000546006 GREM2Q9H772 168 aa23.2■■□□□ 1.3
CCDC189-212ENST00000546006 RTL9Q8NET4 1388 aa23.2■■□□□ 1.3
CCDC189-212ENST00000546006 KCNA3P22001 575 aa23.19■■□□□ 1.3
CCDC189-212ENST00000546006 DDX46Q7L014 1031 aaKnown RBP23.19■■□□□ 1.3
CCDC189-212ENST00000546006 EXOC6Q8TAG9 804 aa23.19■■□□□ 1.3
CCDC189-212ENST00000546006 ZNF622Q969S3 477 aaKnown RBP eCLIP23.19■■□□□ 1.3
CCDC189-212ENST00000546006 CHMP3Q9Y3E7 222 aa23.19■■□□□ 1.3
CCDC189-212ENST00000546006 FAM161AQ3B820 660 aa23.18■■□□□ 1.3
CCDC189-212ENST00000546006 CRAMP1Q96RY5 1269 aa23.18■■□□□ 1.3
CCDC189-212ENST00000546006 DLEC1Q9Y238 1755 aa23.17■■□□□ 1.3
CCDC189-212ENST00000546006 ITGA6P23229 1130 aa23.17■■□□□ 1.3
CCDC189-212ENST00000546006 MTX1Q13505 466 aa23.17■■□□□ 1.3
CCDC189-212ENST00000546006 SEC31BQ9NQW1 1179 aa23.17■■□□□ 1.3
CCDC189-212ENST00000546006 ALDH1B1P30837 517 aa23.16■■□□□ 1.3
CCDC189-212ENST00000546006 IFIT5Q13325 482 aaKnown RBP23.16■■□□□ 1.3
CCDC189-212ENST00000546006 GRAPQ13588 217 aa23.16■■□□□ 1.3
CCDC189-212ENST00000546006 AAMPQ13685 434 aa23.16■■□□□ 1.3
CCDC189-212ENST00000546006 CCDC57Q2TAC2 916 aa23.16■■□□□ 1.3
CCDC189-212ENST00000546006 GRAPLQ8TC17 118 aaPredicted RBP23.16■■□□□ 1.3
CCDC189-212ENST00000546006 CNKSR1Q969H4 720 aa23.16■■□□□ 1.3
CCDC189-212ENST00000546006 ANKRD18BA2A2Z9 1011 aa23.15■■□□□ 1.3
CCDC189-212ENST00000546006 CEP85Q6P2H3 762 aa23.15■■□□□ 1.3
CCDC189-212ENST00000546006 PIM2Q9P1W9 311 aa23.15■■□□□ 1.3
CCDC189-212ENST00000546006 ATP8B2P98198 1209 aa23.14■■□□□ 1.3
CCDC189-212ENST00000546006 CDC5LQ99459 802 aaKnown RBP23.14■■□□□ 1.3
CCDC189-212ENST00000546006 SRGAP3O43295 1099 aa23.13■■□□□ 1.29
CCDC189-212ENST00000546006 TTLL6Q8N841 843 aa23.13■■□□□ 1.29
CCDC189-212ENST00000546006 CELF1Q92879 486 aaKnown RBP23.13■■□□□ 1.29
CCDC189-212ENST00000546006 PNMA6EA0A0J9YXQ4 647 aa23.13■■□□□ 1.29
CCDC189-212ENST00000546006 NEFLP07196 543 aa23.13■■□□□ 1.29
CCDC189-212ENST00000546006 RPAP2Q8IXW5 612 aaPredicted RBP23.13■■□□□ 1.29
CCDC189-212ENST00000546006 RFX5P48382 616 aaPredicted RBP23.12■■□□□ 1.29
CCDC189-212ENST00000546006 RPS8P62241 208 aaKnown RBP23.12■■□□□ 1.29
CCDC189-212ENST00000546006 ANKRD18AQ8IVF6 992 aa23.12■■□□□ 1.29
CCDC189-212ENST00000546006 COL4A1P02462 1669 aa23.11■■□□□ 1.29
CCDC189-212ENST00000546006 BRCA1P38398 1863 aaKnown RBP23.11■■□□□ 1.29
CCDC189-212ENST00000546006 BBOX1O75936 387 aa23.11■■□□□ 1.29
CCDC189-212ENST00000546006 TAF7LQ5H9L4 462 aa23.11■■□□□ 1.29
CCDC189-212ENST00000546006 PRPF40BQ6NWY9 871 aaKnown RBP23.11■■□□□ 1.29
CCDC189-212ENST00000546006 TAF1P21675 1872 aa23.1■■□□□ 1.29
CCDC189-212ENST00000546006 IGHMBP2P38935 993 aaKnown RBP23.1■■□□□ 1.29
CCDC189-212ENST00000546006 DALRD3Q5D0E6 543 aaKnown RBP23.1■■□□□ 1.29
CCDC189-212ENST00000546006 SSH3Q8TE77 659 aa23.1■■□□□ 1.29
CCDC189-212ENST00000546006 PPEF1O14829 653 aaPredicted RBP23.09■■□□□ 1.29
CCDC189-212ENST00000546006 PTPN12Q05209 780 aaKnown RBP23.09■■□□□ 1.29
CCDC189-212ENST00000546006 POLA2Q14181 598 aa23.09■■□□□ 1.29
CCDC189-212ENST00000546006 SIRT2Q8IXJ6 389 aa23.09■■□□□ 1.29
CCDC189-212ENST00000546006 ZNF594Q96JF6 807 aaPredicted RBP23.09■■□□□ 1.29
CCDC189-212ENST00000546006 WWC3Q9ULE0 1092 aa23.09■■□□□ 1.29
CCDC189-212ENST00000546006 PCDHB15Q9Y5E8 787 aa23.09■■□□□ 1.29
CCDC189-212ENST00000546006 TMC4Q7Z404 712 aa23.08■■□□□ 1.29
CCDC189-212ENST00000546006 KLHDC4Q8TBB5 520 aa23.08■■□□□ 1.29
CCDC189-212ENST00000546006 SLX4Q8IY92 1834 aa23.08■■□□□ 1.28
CCDC189-212ENST00000546006 GOLGB1Q14789 3259 aaKnown RBP23.08■■□□□ 1.28
CCDC189-212ENST00000546006 MPHOSPH8Q99549 860 aa23.08■■□□□ 1.28
CCDC189-212ENST00000546006 BSDC1Q9NW68 430 aaPredicted RBP23.08■■□□□ 1.28
CCDC189-212ENST00000546006 HMMRO75330 724 aa23.07■■□□□ 1.28
CCDC189-212ENST00000546006 COPRSQ9NQ92 184 aa23.07■■□□□ 1.28
CCDC189-212ENST00000546006 BCS1LQ9Y276 419 aa23.07■■□□□ 1.28
CCDC189-212ENST00000546006 CACNA1SQ13698 1873 aa23.07■■□□□ 1.28
CCDC189-212ENST00000546006 LDHAL6AQ6ZMR3 332 aa23.06■■□□□ 1.28
CCDC189-212ENST00000546006 C7orf43Q8WVR3 580 aa23.06■■□□□ 1.28
CCDC189-212ENST00000546006 PA2G4Q9UQ80 394 aaKnown RBP23.06■■□□□ 1.28
CCDC189-212ENST00000546006 SP8Q8IXZ3 490 aa23.05■■□□□ 1.28
CCDC189-212ENST00000546006 ATP6V0A2Q9Y487 856 aa23.05■■□□□ 1.28
CCDC189-212ENST00000546006 PUS3Q9BZE2 481 aaKnown RBP23.04■■□□□ 1.28
CCDC189-212ENST00000546006 CNNM1Q9NRU3 951 aa23.04■■□□□ 1.28
CCDC189-212ENST00000546006 ZNF219Q9P2Y4 722 aaPredicted RBP23.04■■□□□ 1.28
CCDC189-212ENST00000546006 EYA2O00167 538 aa23.03■■□□□ 1.28
CCDC189-212ENST00000546006 C21orf2O43822 256 aa23.03■■□□□ 1.28
CCDC189-212ENST00000546006 SLC51AQ86UW1 340 aa23.03■■□□□ 1.28
CCDC189-212ENST00000546006 SIL1Q9H173 461 aa23.03■■□□□ 1.28
CCDC189-212ENST00000546006 TMX4Q9H1E5 349 aaPredicted RBP23.03■■□□□ 1.28
CCDC189-212ENST00000546006 FBXO3Q9UK99 471 aa23.03■■□□□ 1.28
CCDC189-212ENST00000546006 SPEF2Q9C093 1822 aa23.03■■□□□ 1.28
CCDC189-212ENST00000546006 LRRC24Q50LG9 513 aa23.03■■□□□ 1.28
CCDC189-212ENST00000546006 CIAO1O76071 339 aa23.02■■□□□ 1.28
CCDC189-212ENST00000546006 CC2D2BQ6DHV5 1058 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms