RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 POLR1AO95602 1720 aaPredicted RBP10.12□□□□□ -0.79
CLIP1-218ENST00000545889 LDHCP07864 332 aa10.12□□□□□ -0.79
CLIP1-218ENST00000545889 UNC5CLQ8IV45 518 aa10.12□□□□□ -0.79
CLIP1-218ENST00000545889 VTI1AQ96AJ9 217 aa10.12□□□□□ -0.79
CLIP1-218ENST00000545889 GCC1Q96CN9 775 aa10.12□□□□□ -0.79
CLIP1-218ENST00000545889 LMOD1P29536 600 aaPredicted RBP10.12□□□□□ -0.79
CLIP1-218ENST00000545889 CCDC70Q6NSX1 233 aa10.12□□□□□ -0.79
CLIP1-218ENST00000545889 CABP5Q9NP86 173 aa10.12□□□□□ -0.79
CLIP1-218ENST00000545889 BIN2Q9UBW5 565 aaPredicted RBP10.12□□□□□ -0.79
CLIP1-218ENST00000545889 ANKRD18BA2A2Z9 1011 aa10.12□□□□□ -0.79
CLIP1-218ENST00000545889 SYCP1Q15431 976 aa10.12□□□□□ -0.79
CLIP1-218ENST00000545889 CHD1LQ86WJ1 897 aa10.12□□□□□ -0.79
CLIP1-218ENST00000545889 NUTM1Q86Y26 1132 aa10.12□□□□□ -0.79
CLIP1-218ENST00000545889 TRMT2AQ8IZ69 625 aaKnown RBP10.12□□□□□ -0.79
CLIP1-218ENST00000545889 LRRCC1Q9C099 1032 aa10.12□□□□□ -0.79
CLIP1-218ENST00000545889 CTNNA3Q9UI47 895 aa10.12□□□□□ -0.79
CLIP1-218ENST00000545889 TNIP1Q15025 636 aa10.11□□□□□ -0.79
CLIP1-218ENST00000545889 MINDY4BA8MYZ0 360 aa10.11□□□□□ -0.79
CLIP1-218ENST00000545889 PATL2C9JE40 543 aaKnown RBP10.11□□□□□ -0.79
CLIP1-218ENST00000545889 MATR3P43243 847 aaKnown RBP eCLIP10.11□□□□□ -0.79
CLIP1-218ENST00000545889 PROSER3Q2NL68 480 aa10.11□□□□□ -0.79
CLIP1-218ENST00000545889 ZFP91Q96JP5 570 aaPredicted RBP10.11□□□□□ -0.79
CLIP1-218ENST00000545889 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.11□□□□□ -0.798e-7■■■■□ 22.7
CLIP1-218ENST00000545889 GPR162Q16538 588 aa10.11□□□□□ -0.79
CLIP1-218ENST00000545889 PIBF1Q8WXW3 757 aa10.11□□□□□ -0.79
CLIP1-218ENST00000545889 RTCBQ9Y3I0 505 aaKnown RBP10.11□□□□□ -0.79
CLIP1-218ENST00000545889 AFF2P51816 1311 aa10.11□□□□□ -0.79
CLIP1-218ENST00000545889 SLC5A1P13866 664 aa10.11□□□□□ -0.79
CLIP1-218ENST00000545889 CCDC96Q2M329 555 aa10.11□□□□□ -0.79
CLIP1-218ENST00000545889 NLRP3Q96P20 1036 aa10.11□□□□□ -0.79
CLIP1-218ENST00000545889 BMP2KQ9NSY1 1161 aaPredicted RBP10.11□□□□□ -0.79
CLIP1-218ENST00000545889 LRRC7Q96NW7 1537 aa10.1□□□□□ -0.79
CLIP1-218ENST00000545889 ERVV-2B6SEH9 535 aa10.1□□□□□ -0.79
CLIP1-218ENST00000545889 PPM1FP49593 454 aaPredicted RBP10.1□□□□□ -0.79
CLIP1-218ENST00000545889 ZNF444Q8N0Y2 327 aaPredicted RBP10.1□□□□□ -0.79
CLIP1-218ENST00000545889 TRPC5Q9UL62 973 aaPredicted RBP10.1□□□□□ -0.79
CLIP1-218ENST00000545889 CDC45O75419 566 aa10.1□□□□□ -0.79
CLIP1-218ENST00000545889 RBM26Q5T8P6 1007 aaKnown RBP10.1□□□□□ -0.79
CLIP1-218ENST00000545889 DZIP3Q86Y13 1208 aaKnown RBP10.1□□□□□ -0.79
CLIP1-218ENST00000545889 CWC25Q9NXE8 425 aaPredicted RBP10.1□□□□□ -0.79
CLIP1-218ENST00000545889 NRXN3Q9Y4C0 1643 aa10.1□□□□□ -0.79
CLIP1-218ENST00000545889 ZNF853P0CG23 659 aa10.1□□□□□ -0.79
CLIP1-218ENST00000545889 CHMP5Q9NZZ3 219 aa10.1□□□□□ -0.79
CLIP1-218ENST00000545889 TRIM21P19474 475 aaKnown RBP10.1□□□□□ -0.79
CLIP1-218ENST00000545889 MAP3K12Q12852 859 aa10.1□□□□□ -0.79
CLIP1-218ENST00000545889 RDXP35241 583 aaKnown RBP10.09□□□□□ -0.79
CLIP1-218ENST00000545889 CCDC173Q0VFZ6 552 aa10.09□□□□□ -0.79
CLIP1-218ENST00000545889 TSHZ3Q63HK5 1081 aa10.09□□□□□ -0.79
CLIP1-218ENST00000545889 LDHAL6AQ6ZMR3 332 aa10.09□□□□□ -0.79
CLIP1-218ENST00000545889 MPNDQ8N594 471 aa10.09□□□□□ -0.79
CLIP1-218ENST00000545889 CCNL1Q9UK58 526 aaPredicted RBP10.09□□□□□ -0.79
CLIP1-218ENST00000545889 ITSN1Q15811 1721 aa10.09□□□□□ -0.79
CLIP1-218ENST00000545889 PPP4R3AQ6IN85 833 aa10.09□□□□□ -0.79
CLIP1-218ENST00000545889 GRM8O00222 908 aa10.09□□□□□ -0.79
CLIP1-218ENST00000545889 GNPATO15228 680 aa10.09□□□□□ -0.79
CLIP1-218ENST00000545889 PIGBQ92521 554 aa10.09□□□□□ -0.79
CLIP1-218ENST00000545889 ZC3H12CQ9C0D7 883 aaKnown RBP10.09□□□□□ -0.79
CLIP1-218ENST00000545889 BABAM1Q9NWV8 329 aa10.09□□□□□ -0.79
CLIP1-218ENST00000545889 DCCP43146 1447 aa10.09□□□□□ -0.79
CLIP1-218ENST00000545889 MAP2P11137 1827 aaKnown RBP10.08□□□□□ -0.8
CLIP1-218ENST00000545889 LINS1Q8NG48 757 aa10.08□□□□□ -0.8
CLIP1-218ENST00000545889 HLA-DOAP06340 250 aa10.08□□□□□ -0.8
CLIP1-218ENST00000545889 PDCP20941 246 aa10.08□□□□□ -0.8
CLIP1-218ENST00000545889 PA2G4Q9UQ80 394 aaKnown RBP10.08□□□□□ -0.8
CLIP1-218ENST00000545889 NCOA3Q9Y6Q9 1424 aa10.08□□□□□ -0.8
CLIP1-218ENST00000545889 TAF3Q5VWG9 929 aa10.08□□□□□ -0.8
CLIP1-218ENST00000545889 SASS6Q6UVJ0 657 aa10.08□□□□□ -0.8
CLIP1-218ENST00000545889 OLFM4Q6UX06 510 aa10.08□□□□□ -0.8
CLIP1-218ENST00000545889 TTLL7Q6ZT98 887 aa10.08□□□□□ -0.8
CLIP1-218ENST00000545889 CCDC8Q9H0W5 538 aaPredicted RBP10.08□□□□□ -0.8
CLIP1-218ENST00000545889 ZBTB40Q9NUA8 1239 aa10.08□□□□□ -0.8
CLIP1-218ENST00000545889 NIP7Q9Y221 180 aaKnown RBP eCLIP10.08□□□□□ -0.8
CLIP1-218ENST00000545889 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.08□□□□□ -0.8
CLIP1-218ENST00000545889 JCADQ9P266 1359 aa10.08□□□□□ -0.8
CLIP1-218ENST00000545889 SEPT12Q8IYM1 358 aa10.08□□□□□ -0.8
CLIP1-218ENST00000545889 SEC63Q9UGP8 760 aaKnown RBP10.08□□□□□ -0.8
CLIP1-218ENST00000545889 BAG3O95817 575 aa10.07□□□□□ -0.8
CLIP1-218ENST00000545889 LMBR1LQ6UX01 489 aa10.07□□□□□ -0.8
CLIP1-218ENST00000545889 TPTE2Q6XPS3 522 aa10.07□□□□□ -0.8
CLIP1-218ENST00000545889 ERICH4A6NGS2 130 aa10.07□□□□□ -0.8
CLIP1-218ENST00000545889 ZBTB7BO15156 539 aaPredicted RBP10.07□□□□□ -0.8
CLIP1-218ENST00000545889 ECM2O94769 699 aaPredicted RBP10.07□□□□□ -0.8
CLIP1-218ENST00000545889 LETM1O95202 739 aaPredicted RBP10.07□□□□□ -0.8
CLIP1-218ENST00000545889 BRD2P25440 801 aaKnown RBP10.07□□□□□ -0.8
CLIP1-218ENST00000545889 CCDC24Q8N4L8 307 aa10.07□□□□□ -0.8
CLIP1-218ENST00000545889 NAPBQ9H115 298 aa10.07□□□□□ -0.8
CLIP1-218ENST00000545889 NOL7Q9UMY1 257 aaKnown RBP10.07□□□□□ -0.8
CLIP1-218ENST00000545889 MYOM1P52179 1685 aa10.07□□□□□ -0.8
CLIP1-218ENST00000545889 ZBTB22O15209 634 aa10.07□□□□□ -0.8
CLIP1-218ENST00000545889 NBPF7P0C2Y1 421 aaPredicted RBP10.07□□□□□ -0.8
CLIP1-218ENST00000545889 JMYQ8N9B5 988 aa10.07□□□□□ -0.8
CLIP1-218ENST00000545889 FAM89AQ96GI7 184 aa10.07□□□□□ -0.8
CLIP1-218ENST00000545889 TRIM37O94972 964 aa10.06□□□□□ -0.8
CLIP1-218ENST00000545889 HOXB7P09629 217 aa10.06□□□□□ -0.8
CLIP1-218ENST00000545889 STK38Q15208 465 aa10.06□□□□□ -0.8
CLIP1-218ENST00000545889 ZNF408Q9H9D4 720 aa10.06□□□□□ -0.8
CLIP1-218ENST00000545889 KCNQ2O43526 872 aa10.06□□□□□ -0.8
CLIP1-218ENST00000545889 NEK4P51957 841 aa10.06□□□□□ -0.8
CLIP1-218ENST00000545889 CUL5Q93034 780 aa10.06□□□□□ -0.8
CLIP1-218ENST00000545889 CCDC94Q9BW85 323 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms