RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 PTPRCP08575 1304 aa15.07■□□□□ 0
LTBR-214ENST00000545445 IPO8O15397 1037 aaKnown RBP15.06■□□□□ 0
LTBR-214ENST00000545445 RGS19P49795 217 aa15.06■□□□□ 0
LTBR-214ENST00000545445 CLEC4GQ6UXB4 293 aa15.06■□□□□ 0
LTBR-214ENST00000545445 ANKRD13DQ6ZTN6 518 aa15.06■□□□□ 0
LTBR-214ENST00000545445 RTKN2Q8IZC4 609 aa15.06■□□□□ 0
LTBR-214ENST00000545445 GPC2Q8N158 579 aa15.06■□□□□ 0
LTBR-214ENST00000545445 SYNE4Q8N205 404 aa15.06■□□□□ 0
LTBR-214ENST00000545445 ARHGAP45Q92619 1136 aa15.06■□□□□ 0
LTBR-214ENST00000545445 BEGAINQ9BUH8 593 aa15.06■□□□□ 0
LTBR-214ENST00000545445 PHAXQ9H814 394 aaKnown RBP15.06■□□□□ 0
LTBR-214ENST00000545445 ZNF652Q9Y2D9 606 aa15.06■□□□□ 0
LTBR-214ENST00000545445 GJA3Q9Y6H8 435 aa15.06■□□□□ 0
LTBR-214ENST00000545445 MAP3K15Q6ZN16 1313 aa15.06■□□□□ 0
LTBR-214ENST00000545445 COL4A5P29400 1685 aa15.06■□□□□ 0
LTBR-214ENST00000545445 KLRG2A4D1S0 409 aaPredicted RBP15.05■□□□□ -0
LTBR-214ENST00000545445 FAM177BA6PVY3 158 aa15.05■□□□□ -0
LTBR-214ENST00000545445 AIMP1Q12904 312 aaKnown RBP15.05■□□□□ -0
LTBR-214ENST00000545445 PLBD2Q8NHP8 589 aa15.05■□□□□ -0
LTBR-214ENST00000545445 GPR101Q96P66 508 aaPredicted RBP15.05■□□□□ -0
LTBR-214ENST00000545445 BCL2L13Q9BXK5 485 aa15.05■□□□□ -0
LTBR-214ENST00000545445 LTBP1Q14766 1721 aa15.05■□□□□ -0
LTBR-214ENST00000545445 SNED1Q8TER0 1413 aa15.04■□□□□ -0
LTBR-214ENST00000545445 TRAF5O00463 557 aa15.04■□□□□ -0
LTBR-214ENST00000545445 BCAR3O75815 825 aa15.04■□□□□ -0
LTBR-214ENST00000545445 CENPBP07199 599 aaPredicted RBP15.04■□□□□ -0
LTBR-214ENST00000545445 ECE1P42892 770 aa15.04■□□□□ -0
LTBR-214ENST00000545445 FKBP5Q13451 457 aaPredicted RBP15.04■□□□□ -0
LTBR-214ENST00000545445 KSR2Q6VAB6 950 aa15.04■□□□□ -0
LTBR-214ENST00000545445 TTLL7Q6ZT98 887 aa15.04■□□□□ -0
LTBR-214ENST00000545445 G2E3Q7L622 706 aa15.04■□□□□ -0
LTBR-214ENST00000545445 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.04■□□□□ -0
LTBR-214ENST00000545445 PCDH10Q9P2E7 1040 aa15.04■□□□□ -0
LTBR-214ENST00000545445 AOC2O75106 756 aa15.03■□□□□ -0
LTBR-214ENST00000545445 LMOD1P29536 600 aaPredicted RBP15.03■□□□□ -0
LTBR-214ENST00000545445 HSP90AB3PQ58FF7 597 aa15.03■□□□□ -0
LTBR-214ENST00000545445 GIGYF2Q6Y7W6 1299 aaKnown RBP15.03■□□□□ -0
LTBR-214ENST00000545445 RIC3Q7Z5B4 369 aa15.03■□□□□ -0
LTBR-214ENST00000545445 API5Q9BZZ5 524 aaKnown RBP15.03■□□□□ -0
LTBR-214ENST00000545445 NOB1Q9ULX3 412 aaKnown RBP15.03■□□□□ -0
LTBR-214ENST00000545445 NIP7Q9Y221 180 aaKnown RBP eCLIP15.03■□□□□ -0
LTBR-214ENST00000545445 EPS15P42566 896 aa15.02■□□□□ -0
LTBR-214ENST00000545445 SCNN1DP51172 638 aa15.02■□□□□ -0
LTBR-214ENST00000545445 CST9Q5W186 159 aa15.02■□□□□ -0
LTBR-214ENST00000545445 JDP2Q8WYK2 163 aa15.02■□□□□ -0
LTBR-214ENST00000545445 MCOLN1Q9GZU1 580 aa15.02■□□□□ -0
LTBR-214ENST00000545445 ABCC12Q96J65 1359 aa15.01□□□□□ -0.01
LTBR-214ENST00000545445 PI4KAP2A4QPH2 592 aa15.01□□□□□ -0.01
LTBR-214ENST00000545445 MS4A1P11836 297 aa15.01□□□□□ -0.01
LTBR-214ENST00000545445 EIF6P56537 245 aaKnown RBP15.01□□□□□ -0.01
LTBR-214ENST00000545445 ZKSCAN2Q63HK3 967 aa15.01□□□□□ -0.01
LTBR-214ENST00000545445 TPTE2Q6XPS3 522 aa15.01□□□□□ -0.01
LTBR-214ENST00000545445 SLC51AQ86UW1 340 aa15.01□□□□□ -0.01
LTBR-214ENST00000545445 PI4KAP1Q8N8J0 262 aa15.01□□□□□ -0.01
LTBR-214ENST00000545445 PSMD1Q99460 953 aa15.01□□□□□ -0.01
LTBR-214ENST00000545445 ZBTB3Q9H5J0 574 aa15.01□□□□□ -0.01
LTBR-214ENST00000545445 TLL2Q9Y6L7 1015 aa15.01□□□□□ -0.01
LTBR-214ENST00000545445 NEXNQ0ZGT2 675 aa15□□□□□ -0.01
LTBR-214ENST00000545445 TCIRG1Q13488 830 aa15□□□□□ -0.01
LTBR-214ENST00000545445 ATF7IPQ6VMQ6 1270 aa15□□□□□ -0.01
LTBR-214ENST00000545445 DNAAF4Q8WXU2 420 aa15□□□□□ -0.01
LTBR-214ENST00000545445 FRAT1Q92837 279 aaPredicted RBP15□□□□□ -0.01
LTBR-214ENST00000545445 METTL22Q9BUU2 404 aaPredicted RBP15□□□□□ -0.01
LTBR-214ENST00000545445 MAP3K2Q9Y2U5 619 aa15□□□□□ -0.01
LTBR-214ENST00000545445 ALDH1B1P30837 517 aa14.99□□□□□ -0.01
LTBR-214ENST00000545445 TRIM28Q13263 835 aaKnown RBP14.99□□□□□ -0.01
LTBR-214ENST00000545445 HLFQ16534 295 aa14.99□□□□□ -0.01
LTBR-214ENST00000545445 GTF2E1P29083 439 aaPredicted RBP14.98□□□□□ -0.01
LTBR-214ENST00000545445 LARGE2Q8N3Y3 721 aa14.98□□□□□ -0.01
LTBR-214ENST00000545445 TNRC18O15417 2968 aaPredicted RBP14.97□□□□□ -0.01
LTBR-214ENST00000545445 TRIM27P14373 513 aa14.97□□□□□ -0.01
LTBR-214ENST00000545445 MAP2K2P36507 400 aa14.97□□□□□ -0.01
LTBR-214ENST00000545445 CRY2Q49AN0 593 aa14.97□□□□□ -0.01
LTBR-214ENST00000545445 PARP10Q53GL7 1025 aa14.97□□□□□ -0.01
LTBR-214ENST00000545445 USP50Q70EL3 339 aaPredicted RBP14.97□□□□□ -0.01
LTBR-214ENST00000545445 NUTM1Q86Y26 1132 aa14.97□□□□□ -0.01
LTBR-214ENST00000545445 ZNF34Q8IZ26 560 aa14.97□□□□□ -0.01
LTBR-214ENST00000545445 LINS1Q8NG48 757 aa14.97□□□□□ -0.01
LTBR-214ENST00000545445 IBTKQ9P2D0 1353 aaPredicted RBP14.97□□□□□ -0.01
LTBR-214ENST00000545445 F6X3S4 739 aa14.96□□□□□ -0.01
LTBR-214ENST00000545445 CELF2O95319 508 aaKnown RBP14.96□□□□□ -0.01
LTBR-214ENST00000545445 CCT4P50991 539 aaKnown RBP14.96□□□□□ -0.01
LTBR-214ENST00000545445 DGKZQ13574 1117 aa14.96□□□□□ -0.01
LTBR-214ENST00000545445 CCDC191Q8NCU4 936 aa14.96□□□□□ -0.01
LTBR-214ENST00000545445 MYD88Q99836 296 aa14.96□□□□□ -0.01
LTBR-214ENST00000545445 ISCA1Q9BUE6 129 aa14.96□□□□□ -0.01
LTBR-214ENST00000545445 CA12O43570 354 aa14.95□□□□□ -0.02
LTBR-214ENST00000545445 ALDH1L1O75891 902 aa14.95□□□□□ -0.02
LTBR-214ENST00000545445 PDE3AQ14432 1141 aa14.95□□□□□ -0.02
LTBR-214ENST00000545445 BEND3Q5T5X7 828 aa14.95□□□□□ -0.02
LTBR-214ENST00000545445 CC2D2BQ6DHV5 1058 aa14.95□□□□□ -0.02
LTBR-214ENST00000545445 SLC4A10Q6U841 1118 aa14.95□□□□□ -0.02
LTBR-214ENST00000545445 PPP1R42Q7Z4L9 355 aa14.95□□□□□ -0.02
LTBR-214ENST00000545445 SAPCD2Q86UD0 394 aa14.95□□□□□ -0.02
LTBR-214ENST00000545445 FTSJ3Q8IY81 847 aaKnown RBP14.95□□□□□ -0.02
LTBR-214ENST00000545445 DZIP1LQ8IYY4 767 aaKnown RBP14.95□□□□□ -0.02
LTBR-214ENST00000545445 GLIS2Q9BZE0 524 aaPredicted RBP14.95□□□□□ -0.02
LTBR-214ENST00000545445 ABCC4O15439 1325 aa14.94□□□□□ -0.02
LTBR-214ENST00000545445 RRP1P56182 461 aaKnown RBP14.94□□□□□ -0.02
LTBR-214ENST00000545445 INTS3Q68E01 1043 aaKnown RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms