RNA–Protein interactions for RNA: ENST00000545284.1

COPA-207, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-207ENST00000545284 RAD17O75943 681 aa9.76□□□□□ -0.85
COPA-207ENST00000545284 EIF4G2P78344 907 aaKnown RBP eCLIP9.76□□□□□ -0.85
COPA-207ENST00000545284 KIF6Q6ZMV9 814 aa9.76□□□□□ -0.85
COPA-207ENST00000545284 SULF1Q8IWU6 871 aa9.76□□□□□ -0.85
COPA-207ENST00000545284 ZNF34Q8IZ26 560 aa9.76□□□□□ -0.85
COPA-207ENST00000545284 ZNF296Q8WUU4 475 aaPredicted RBP9.76□□□□□ -0.85
COPA-207ENST00000545284 RTF1Q92541 710 aaKnown RBP9.76□□□□□ -0.85
COPA-207ENST00000545284 PRAMEF22A3QJZ6 481 aa9.75□□□□□ -0.85
COPA-207ENST00000545284 GPR25O00155 361 aa9.75□□□□□ -0.85
COPA-207ENST00000545284 TM4SF4P48230 202 aa9.75□□□□□ -0.85
COPA-207ENST00000545284 SUSD4Q5VX71 490 aa9.75□□□□□ -0.85
COPA-207ENST00000545284 GIGYF2Q6Y7W6 1299 aaKnown RBP9.75□□□□□ -0.85
COPA-207ENST00000545284 YDJCA8MPS7 323 aa9.74□□□□□ -0.85
COPA-207ENST00000545284 TCERG1O14776 1098 aaKnown RBP9.74□□□□□ -0.85
COPA-207ENST00000545284 NTSR2O95665 410 aa9.74□□□□□ -0.85
COPA-207ENST00000545284 SAMD7Q7Z3H4 446 aa9.74□□□□□ -0.85
COPA-207ENST00000545284 RASAL3Q86YV0 1011 aa9.74□□□□□ -0.85
COPA-207ENST00000545284 UBN2Q6ZU65 1347 aa9.74□□□□□ -0.85
COPA-207ENST00000545284 U2SURPO15042 1029 aaKnown RBP9.73□□□□□ -0.85
COPA-207ENST00000545284 FKTNO75072 461 aa9.73□□□□□ -0.85
COPA-207ENST00000545284 ALDH1A1P00352 501 aa9.73□□□□□ -0.85
COPA-207ENST00000545284 TAF7Q15545 349 aaPredicted RBP9.73□□□□□ -0.85
COPA-207ENST00000545284 PNISRQ8TF01 805 aaKnown RBP9.73□□□□□ -0.85
COPA-207ENST00000545284 UTP14AQ9BVJ6 771 aaKnown RBP9.73□□□□□ -0.85
COPA-207ENST00000545284 ABCC4O15439 1325 aa9.73□□□□□ -0.85
COPA-207ENST00000545284 ERBB4Q15303 1308 aa9.73□□□□□ -0.85
COPA-207ENST00000545284 ADM5C9JUS6 153 aa9.72□□□□□ -0.85
COPA-207ENST00000545284 PSMD14O00487 310 aa9.72□□□□□ -0.85
COPA-207ENST00000545284 INHBEP58166 350 aa9.72□□□□□ -0.85
COPA-207ENST00000545284 SREBF2Q12772 1141 aa9.72□□□□□ -0.85
COPA-207ENST00000545284 WASHC4Q2M389 1173 aa9.72□□□□□ -0.85
COPA-207ENST00000545284 TBC1D10BQ4KMP7 808 aaPredicted RBP9.72□□□□□ -0.85
COPA-207ENST00000545284 DDX46Q7L014 1031 aaKnown RBP9.72□□□□□ -0.85
COPA-207ENST00000545284 CDCA5Q96FF9 252 aa9.72□□□□□ -0.85
COPA-207ENST00000545284 PHACTR3Q96KR7 559 aa9.72□□□□□ -0.85
COPA-207ENST00000545284 ZBTB12Q9Y330 459 aaPredicted RBP9.72□□□□□ -0.85
COPA-207ENST00000545284 PITPNM2Q9BZ72 1349 aa9.72□□□□□ -0.85
COPA-207ENST00000545284 SIPA1L3O60292 1781 aaPredicted RBP9.71□□□□□ -0.85
COPA-207ENST00000545284 TBC1D8O95759 1140 aa9.71□□□□□ -0.86
COPA-207ENST00000545284 VIL1P09327 827 aaKnown RBP9.71□□□□□ -0.86
COPA-207ENST00000545284 GPTP24298 496 aa9.71□□□□□ -0.86
COPA-207ENST00000545284 GRAPQ13588 217 aa9.71□□□□□ -0.86
COPA-207ENST00000545284 KIF4BQ2VIQ3 1234 aa9.71□□□□□ -0.86
COPA-207ENST00000545284 DLK2Q6UY11 383 aa9.71□□□□□ -0.86
COPA-207ENST00000545284 C3orf67Q6ZVT6 689 aa9.71□□□□□ -0.86
COPA-207ENST00000545284 GRAPLQ8TC17 118 aaPredicted RBP9.71□□□□□ -0.86
COPA-207ENST00000545284 EYA3Q99504 573 aa9.71□□□□□ -0.86
COPA-207ENST00000545284 SHTN1A0MZ66 631 aa9.7□□□□□ -0.86
COPA-207ENST00000545284 PER1O15534 1290 aaPredicted RBP9.7□□□□□ -0.86
COPA-207ENST00000545284 EGFRP00533 1210 aa9.7□□□□□ -0.86
COPA-207ENST00000545284 ZNF280AP59817 542 aaPredicted RBP9.7□□□□□ -0.86
COPA-207ENST00000545284 TTLL7Q6ZT98 887 aa9.7□□□□□ -0.86
COPA-207ENST00000545284 AGBL3Q8NEM8 1001 aa9.7□□□□□ -0.86
COPA-207ENST00000545284 RSPH6AQ9H0K4 717 aa9.7□□□□□ -0.86
COPA-207ENST00000545284 GGA3Q9NZ52 723 aa9.7□□□□□ -0.86
COPA-207ENST00000545284 DLL1O00548 723 aa9.69□□□□□ -0.86
COPA-207ENST00000545284 ZNF609O15014 1411 aa9.69□□□□□ -0.86
COPA-207ENST00000545284 PRKAR2BP31323 418 aa9.69□□□□□ -0.86
COPA-207ENST00000545284 MMP14P50281 582 aa9.69□□□□□ -0.86
COPA-207ENST00000545284 HSP90AB3PQ58FF7 597 aa9.69□□□□□ -0.86
COPA-207ENST00000545284 RBM26Q5T8P6 1007 aaKnown RBP9.69□□□□□ -0.86
COPA-207ENST00000545284 MCM10Q7L590 875 aa9.69□□□□□ -0.86
COPA-207ENST00000545284 NGEFQ8N5V2 710 aa9.69□□□□□ -0.86
COPA-207ENST00000545284 ZBTB3Q9H5J0 574 aa9.69□□□□□ -0.86
COPA-207ENST00000545284 NUDCQ9Y266 331 aa9.69□□□□□ -0.86
COPA-207ENST00000545284 RRP7AQ9Y3A4 280 aaKnown RBP9.69□□□□□ -0.86
COPA-207ENST00000545284 HSPA5P11021 654 aaKnown RBP9.68□□□□□ -0.86
COPA-207ENST00000545284 SCARF1Q14162 830 aa9.68□□□□□ -0.86
COPA-207ENST00000545284 SLC51AQ86UW1 340 aa9.68□□□□□ -0.86
COPA-207ENST00000545284 ARMC5Q96C12 935 aa9.68□□□□□ -0.86
COPA-207ENST00000545284 NSFL1CQ9UNZ2 370 aaKnown RBP9.68□□□□□ -0.86
COPA-207ENST00000545284 AKAP11Q9UKA4 1901 aa9.68□□□□□ -0.86
COPA-207ENST00000545284 RTL9Q8NET4 1388 aa9.67□□□□□ -0.86
COPA-207ENST00000545284 CLSPNQ9HAW4 1339 aa9.67□□□□□ -0.86
COPA-207ENST00000545284 POTEFA5A3E0 1075 aa9.67□□□□□ -0.86
COPA-207ENST00000545284 UNCXA6NJT0 531 aa9.67□□□□□ -0.86
COPA-207ENST00000545284 ECE2O60344 883 aa9.67□□□□□ -0.86
COPA-207ENST00000545284 NF2P35240 595 aa9.67□□□□□ -0.86
COPA-207ENST00000545284 EIF4A1P60842 406 aaKnown RBP9.67□□□□□ -0.86
COPA-207ENST00000545284 TCIRG1Q13488 830 aa9.67□□□□□ -0.86
COPA-207ENST00000545284 ANGEL2Q5VTE6 544 aaKnown RBP9.67□□□□□ -0.86
COPA-207ENST00000545284 OTOP1Q7RTM1 612 aa9.67□□□□□ -0.86
COPA-207ENST00000545284 CFAP53Q96M91 514 aa9.67□□□□□ -0.86
COPA-207ENST00000545284 DBNDD1Q9H9R9 158 aa9.67□□□□□ -0.86
COPA-207ENST00000545284 COLQQ9Y215 455 aaPredicted RBP9.67□□□□□ -0.86
COPA-207ENST00000545284 COL3A1P02461 1466 aaPredicted RBP9.66□□□□□ -0.86
COPA-207ENST00000545284 SH3TC1Q8TE82 1336 aa9.66□□□□□ -0.86
COPA-207ENST00000545284 C6orf229H3BNL8 230 aa9.66□□□□□ -0.86
COPA-207ENST00000545284 MYL6BP14649 208 aa9.66□□□□□ -0.86
COPA-207ENST00000545284 SF3B3Q15393 1217 aaKnown RBP9.66□□□□□ -0.86
COPA-207ENST00000545284 SLC17A8Q8NDX2 589 aa9.66□□□□□ -0.86
COPA-207ENST00000545284 ERO1AQ96HE7 468 aa9.66□□□□□ -0.86
COPA-207ENST00000545284 TMEM106CQ9BVX2 250 aa9.66□□□□□ -0.86
COPA-207ENST00000545284 ZC3H12CQ9C0D7 883 aaKnown RBP9.66□□□□□ -0.86
COPA-207ENST00000545284 POLLQ9UGP5 575 aa9.66□□□□□ -0.86
COPA-207ENST00000545284 PTPN22Q9Y2R2 807 aa9.66□□□□□ -0.86
COPA-207ENST00000545284 TRIM17Q9Y577 477 aa9.66□□□□□ -0.86
COPA-207ENST00000545284 PAPPA2Q9BXP8 1791 aa9.65□□□□□ -0.86
COPA-207ENST00000545284 MANSC4A6NHS7 340 aaPredicted RBP9.65□□□□□ -0.86
COPA-207ENST00000545284 UBE2Q2LH0YL09 131 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms