RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 VPS72Q15906 364 aa20.06■□□□□ 0.8
CHFR-224ENST00000545046 FAM98CQ17RN3 349 aaKnown RBP20.06■□□□□ 0.8
CHFR-224ENST00000545046 CEP126Q9P2H0 1117 aa20.06■□□□□ 0.8
CHFR-224ENST00000545046 IFIT5Q13325 482 aaKnown RBP20.05■□□□□ 0.8
CHFR-224ENST00000545046 FAM227BQ96M60 508 aa20.05■□□□□ 0.8
CHFR-224ENST00000545046 HAUS7Q99871 368 aa20.05■□□□□ 0.8
CHFR-224ENST00000545046 TRMT112Q9UI30 125 aaKnown RBP20.05■□□□□ 0.8
CHFR-224ENST00000545046 CRKLP46109 303 aaKnown RBP20.05■□□□□ 0.8
CHFR-224ENST00000545046 EIF5P55010 431 aaKnown RBP20.05■□□□□ 0.8
CHFR-224ENST00000545046 PTH1RQ03431 593 aa20.05■□□□□ 0.8
CHFR-224ENST00000545046 GBP4Q96PP9 640 aa20.05■□□□□ 0.8
CHFR-224ENST00000545046 DNAJC2Q99543 621 aaKnown RBP20.05■□□□□ 0.8
CHFR-224ENST00000545046 CCDC171Q6TFL3 1326 aa20.05■□□□□ 0.8
CHFR-224ENST00000545046 TIMM10P62072 90 aa20.04■□□□□ 0.8
CHFR-224ENST00000545046 NUCB2P80303 420 aa20.04■□□□□ 0.8
CHFR-224ENST00000545046 INTS5Q6P9B9 1019 aaKnown RBP20.04■□□□□ 0.8
CHFR-224ENST00000545046 TMX3Q96JJ7 454 aa20.04■□□□□ 0.8
CHFR-224ENST00000545046 PUS3Q9BZE2 481 aaKnown RBP20.04■□□□□ 0.8
CHFR-224ENST00000545046 UPF3BQ9BZI7 483 aaKnown RBP20.04■□□□□ 0.8
CHFR-224ENST00000545046 SNRKQ9NRH2 765 aa20.04■□□□□ 0.8
CHFR-224ENST00000545046 AKAP2Q9Y2D5 859 aa20.04■□□□□ 0.8
CHFR-224ENST00000545046 PALLDQ8WX93 1383 aa20.04■□□□□ 0.8
CHFR-224ENST00000545046 CICQ96RK0 1608 aaPredicted RBP20.04■□□□□ 0.8
CHFR-224ENST00000545046 DDX11L8A8MPP1 907 aa20.03■□□□□ 0.8
CHFR-224ENST00000545046 IRS4O14654 1257 aaPredicted RBP20.03■□□□□ 0.8
CHFR-224ENST00000545046 ZNF609O15014 1411 aa20.03■□□□□ 0.8
CHFR-224ENST00000545046 RFX7Q2KHR2 1363 aa20.03■□□□□ 0.8
CHFR-224ENST00000545046 CCDC85AQ96PX6 553 aaPredicted RBP20.03■□□□□ 0.8
CHFR-224ENST00000545046 BCL9LQ86UU0 1499 aa20.03■□□□□ 0.8
CHFR-224ENST00000545046 A0A0D9SFI3 127 aa20.02■□□□□ 0.8
CHFR-224ENST00000545046 KCNJ4P48050 445 aa20.02■□□□□ 0.8
CHFR-224ENST00000545046 ZNF34Q8IZ26 560 aa20.02■□□□□ 0.8
CHFR-224ENST00000545046 SYNE4Q8N205 404 aa20.02■□□□□ 0.8
CHFR-224ENST00000545046 EDC3Q96F86 508 aaKnown RBP20.02■□□□□ 0.8
CHFR-224ENST00000545046 RREB1Q92766 1687 aa20.02■□□□□ 0.8
CHFR-224ENST00000545046 A0A1B0GUL7 405 aa20.02■□□□□ 0.8
CHFR-224ENST00000545046 RASEFQ8IZ41 740 aa20.02■□□□□ 0.8
CHFR-224ENST00000545046 TTLL11Q8NHH1 800 aa20.02■□□□□ 0.8
CHFR-224ENST00000545046 CTSWP56202 376 aa20.01■□□□□ 0.79
CHFR-224ENST00000545046 PRPF40BQ6NWY9 871 aaKnown RBP20.01■□□□□ 0.79
CHFR-224ENST00000545046 MAP4K1Q92918 833 aa20.01■□□□□ 0.79
CHFR-224ENST00000545046 KCNQ2O43526 872 aa20.01■□□□□ 0.79
CHFR-224ENST00000545046 PDE8AO60658 829 aa20.01■□□□□ 0.79
CHFR-224ENST00000545046 ZKSCAN1P17029 563 aaPredicted RBP20.01■□□□□ 0.79
CHFR-224ENST00000545046 ITPK1Q13572 414 aa20.01■□□□□ 0.79
CHFR-224ENST00000545046 NECTIN1Q15223 517 aa20.01■□□□□ 0.79
CHFR-224ENST00000545046 RBM8AQ9Y5S9 174 aaKnown RBP20.01■□□□□ 0.79
CHFR-224ENST00000545046 ANKRD18BA2A2Z9 1011 aa20■□□□□ 0.79
CHFR-224ENST00000545046 CUL4AQ13619 759 aa20■□□□□ 0.79
CHFR-224ENST00000545046 FNBP4Q8N3X1 1017 aaPredicted RBP20■□□□□ 0.79
CHFR-224ENST00000545046 ZGPATQ8N5A5 531 aaKnown RBP20■□□□□ 0.79
CHFR-224ENST00000545046 KCNB2Q92953 911 aa20■□□□□ 0.79
CHFR-224ENST00000545046 MYH14Q7Z406 1995 aaKnown RBP20■□□□□ 0.79
CHFR-224ENST00000545046 ITGA6P23229 1130 aa20■□□□□ 0.79
CHFR-224ENST00000545046 SSFA2P28290 1259 aa20■□□□□ 0.79
CHFR-224ENST00000545046 NOL8Q76FK4 1167 aaKnown RBP20■□□□□ 0.79
CHFR-224ENST00000545046 TICAM2Q86XR7 235 aa20■□□□□ 0.79
CHFR-224ENST00000545046 NDUFB9Q9Y6M9 179 aa20■□□□□ 0.79
CHFR-224ENST00000545046 MED23Q9ULK4 1368 aa19.99■□□□□ 0.79
CHFR-224ENST00000545046 SPATA31A6Q5VVP1 1343 aa19.99■□□□□ 0.79
CHFR-224ENST00000545046 UBN2Q6ZU65 1347 aa19.99■□□□□ 0.79
CHFR-224ENST00000545046 KBTBD3Q8NAB2 608 aa19.99■□□□□ 0.79
CHFR-224ENST00000545046 INTS4Q96HW7 963 aaKnown RBP19.99■□□□□ 0.79
CHFR-224ENST00000545046 PAG1Q9NWQ8 432 aa19.99■□□□□ 0.79
CHFR-224ENST00000545046 IFIT1P09914 478 aaKnown RBP19.98■□□□□ 0.79
CHFR-224ENST00000545046 PTMSP20962 102 aa19.98■□□□□ 0.79
CHFR-224ENST00000545046 CCDC158Q5M9N0 1113 aa19.98■□□□□ 0.79
CHFR-224ENST00000545046 GORABQ5T7V8 394 aa19.98■□□□□ 0.79
CHFR-224ENST00000545046 RNF20Q5VTR2 975 aa19.98■□□□□ 0.79
CHFR-224ENST00000545046 LDHAL6AQ6ZMR3 332 aa19.98■□□□□ 0.79
CHFR-224ENST00000545046 DDX46Q7L014 1031 aaKnown RBP19.98■□□□□ 0.79
CHFR-224ENST00000545046 AK7Q96M32 723 aa19.98■□□□□ 0.79
CHFR-224ENST00000545046 TM6SF1Q9BZW5 370 aa19.98■□□□□ 0.79
CHFR-224ENST00000545046 GREM2Q9H772 168 aa19.98■□□□□ 0.79
CHFR-224ENST00000545046 CASTP20810 708 aaKnown RBP19.98■□□□□ 0.79
CHFR-224ENST00000545046 CREB3L3Q68CJ9 461 aa19.98■□□□□ 0.79
CHFR-224ENST00000545046 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.98■□□□□ 0.79
CHFR-224ENST00000545046 USP21Q9UK80 565 aa19.98■□□□□ 0.79
CHFR-224ENST00000545046 ZNF831Q5JPB2 1677 aa19.98■□□□□ 0.79
CHFR-224ENST00000545046 SPEF2Q9C093 1822 aa19.97■□□□□ 0.79
CHFR-224ENST00000545046 JAKMIP1Q96N16 626 aaKnown RBP19.97■□□□□ 0.79
CHFR-224ENST00000545046 TTC14Q96N46 770 aa19.97■□□□□ 0.79
CHFR-224ENST00000545046 COL5A3P25940 1745 aaPredicted RBP19.97■□□□□ 0.79
CHFR-224ENST00000545046 GOLIM4O00461 696 aa19.97■□□□□ 0.79
CHFR-224ENST00000545046 CAMTA2O94983 1202 aa19.96■□□□□ 0.79
CHFR-224ENST00000545046 MCMDC2Q4G0Z9 681 aa19.96■□□□□ 0.79
CHFR-224ENST00000545046 PARP10Q53GL7 1025 aa19.96■□□□□ 0.79
CHFR-224ENST00000545046 METTL24Q5JXM2 366 aa19.96■□□□□ 0.79
CHFR-224ENST00000545046 TTC39AQ5SRH9 613 aa19.96■□□□□ 0.79
CHFR-224ENST00000545046 CLEC17AQ6ZS10 378 aa19.96■□□□□ 0.79
CHFR-224ENST00000545046 ZNF589Q86UQ0 364 aaPredicted RBP19.96■□□□□ 0.79
CHFR-224ENST00000545046 CNNM1Q9NRU3 951 aa19.96■□□□□ 0.79
CHFR-224ENST00000545046 CYP46A1Q9Y6A2 500 aa19.96■□□□□ 0.79
CHFR-224ENST00000545046 GOLGA6L22H0YM25 854 aa19.95■□□□□ 0.78
CHFR-224ENST00000545046 XAGE2Q96GT9 111 aa19.95■□□□□ 0.78
CHFR-224ENST00000545046 UTP14AQ9BVJ6 771 aaKnown RBP19.95■□□□□ 0.78
CHFR-224ENST00000545046 RIPOR2Q9Y4F9 1068 aa19.95■□□□□ 0.78
CHFR-224ENST00000545046 SLC27A2O14975 620 aa19.95■□□□□ 0.78
CHFR-224ENST00000545046 TRAK2O60296 914 aa19.95■□□□□ 0.78
CHFR-224ENST00000545046 TAF5LO75529 589 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms