RNA–Protein interactions for RNA: ENST00000545012.5

TRIM46-210, Transcript of tripartite motif containing 46, humanhuman

TSL 2 BASIC

Gene TRIM46, Length 2,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-210ENST00000545012 RIOK3O14730 519 aaKnown RBP17.56■□□□□ 0.4
TRIM46-210ENST00000545012 BRD1O95696 1058 aa17.56■□□□□ 0.4
TRIM46-210ENST00000545012 LRSAM1Q6UWE0 723 aa17.56■□□□□ 0.4
TRIM46-210ENST00000545012 DDX21Q9NR30 783 aaKnown RBP eCLIP17.56■□□□□ 0.4
TRIM46-210ENST00000545012 IFIT2P09913 472 aaKnown RBP17.56■□□□□ 0.4
TRIM46-210ENST00000545012 ZNF790Q6PG37 636 aa17.56■□□□□ 0.4
TRIM46-210ENST00000545012 CRYBG1Q9Y4K1 1723 aa17.56■□□□□ 0.4
TRIM46-210ENST00000545012 C17orf53Q8N3J3 647 aaPredicted RBP17.55■□□□□ 0.4
TRIM46-210ENST00000545012 SPTLC3Q9NUV7 552 aa17.55■□□□□ 0.4
TRIM46-210ENST00000545012 GRM8O00222 908 aa17.55■□□□□ 0.4
TRIM46-210ENST00000545012 GLRX3O76003 335 aaKnown RBP17.55■□□□□ 0.4
TRIM46-210ENST00000545012 LINS1Q8NG48 757 aa17.55■□□□□ 0.4
TRIM46-210ENST00000545012 SPG7Q9UQ90 795 aa17.55■□□□□ 0.4
TRIM46-210ENST00000545012 MORC2Q9Y6X9 1032 aaPredicted RBP17.55■□□□□ 0.4
TRIM46-210ENST00000545012 SGSM2O43147 1006 aa17.55■□□□□ 0.4
TRIM46-210ENST00000545012 TNNT3P45378 269 aaPredicted RBP17.55■□□□□ 0.4
TRIM46-210ENST00000545012 COL9A3Q14050 684 aaPredicted RBP17.55■□□□□ 0.4
TRIM46-210ENST00000545012 TUBGCP6Q96RT7 1819 aa17.54■□□□□ 0.4
TRIM46-210ENST00000545012 LARP1Q6PKG0 1096 aaKnown RBP17.54■□□□□ 0.4
TRIM46-210ENST00000545012 SUCLG2Q96I99 432 aa17.54■□□□□ 0.4
TRIM46-210ENST00000545012 DIAPH3Q9NSV4 1193 aa17.54■□□□□ 0.4
TRIM46-210ENST00000545012 CAMTA1Q9Y6Y1 1673 aa17.54■□□□□ 0.4
TRIM46-210ENST00000545012 TCHHQ07283 1943 aa17.54■□□□□ 0.4
TRIM46-210ENST00000545012 HSPA4P34932 840 aa17.53■□□□□ 0.4
TRIM46-210ENST00000545012 PIP4K2AP48426 406 aaPredicted RBP17.53■□□□□ 0.4
TRIM46-210ENST00000545012 MTX1Q13505 466 aa17.53■□□□□ 0.4
TRIM46-210ENST00000545012 AACSQ86V21 672 aa17.53■□□□□ 0.4
TRIM46-210ENST00000545012 RASEFQ8IZ41 740 aa17.53■□□□□ 0.4
TRIM46-210ENST00000545012 SIL1Q9H173 461 aa17.53■□□□□ 0.4
TRIM46-210ENST00000545012 BICC1Q9H694 974 aaKnown RBP17.53■□□□□ 0.4
TRIM46-210ENST00000545012 SLC52A2Q9HAB3 445 aa17.53■□□□□ 0.4
TRIM46-210ENST00000545012 G3BP1Q13283 466 aaKnown RBP eCLIP17.53■□□□□ 0.4
TRIM46-210ENST00000545012 USP48Q86UV5 1035 aa17.53■□□□□ 0.4
TRIM46-210ENST00000545012 HOMEZQ8IX15 550 aa17.53■□□□□ 0.4
TRIM46-210ENST00000545012 GPATCH3Q96I76 525 aa17.53■□□□□ 0.4
TRIM46-210ENST00000545012 COL18A1P39060 1754 aa17.53■□□□□ 0.4
TRIM46-210ENST00000545012 HEG1Q9ULI3 1381 aa17.53■□□□□ 0.4
TRIM46-210ENST00000545012 ABCC6O95255 1503 aa17.53■□□□□ 0.4
TRIM46-210ENST00000545012 ECHDC1Q9NTX5 307 aa17.52■□□□□ 0.4
TRIM46-210ENST00000545012 PATL2C9JE40 543 aaKnown RBP17.52■□□□□ 0.4
TRIM46-210ENST00000545012 NOP2P46087 812 aaKnown RBP17.52■□□□□ 0.4
TRIM46-210ENST00000545012 NEXNQ0ZGT2 675 aa17.52■□□□□ 0.4
TRIM46-210ENST00000545012 ERC1Q8IUD2 1116 aa17.52■□□□□ 0.4
TRIM46-210ENST00000545012 COL5A2P05997 1499 aaPredicted RBP17.52■□□□□ 0.4
TRIM46-210ENST00000545012 TTC41PQ6P2S7 1318 aa17.52■□□□□ 0.4
TRIM46-210ENST00000545012 PHKG2P15735 406 aa17.52■□□□□ 0.39
TRIM46-210ENST00000545012 CUL4AQ13619 759 aa17.52■□□□□ 0.39
TRIM46-210ENST00000545012 PDIA6Q15084 440 aa17.52■□□□□ 0.39
TRIM46-210ENST00000545012 XAGE3Q8WTP9 111 aa17.52■□□□□ 0.39
TRIM46-210ENST00000545012 NCBP1Q09161 790 aaKnown RBP17.51■□□□□ 0.39
TRIM46-210ENST00000545012 COPS6Q7L5N1 327 aa17.51■□□□□ 0.39
TRIM46-210ENST00000545012 IFNL2Q8IZJ0 200 aa17.51■□□□□ 0.39
TRIM46-210ENST00000545012 TTC5Q8N0Z6 440 aa17.51■□□□□ 0.39
TRIM46-210ENST00000545012 ZNF496Q96IT1 587 aaPredicted RBP17.51■□□□□ 0.39
TRIM46-210ENST00000545012 RAD50Q92878 1312 aa17.51■□□□□ 0.39
TRIM46-210ENST00000545012 EP400NLQ6ZTU2 488 aa17.51■□□□□ 0.39
TRIM46-210ENST00000545012 CCDC8Q9H0W5 538 aaPredicted RBP17.51■□□□□ 0.39
TRIM46-210ENST00000545012 RSPH14Q9UHP6 348 aa17.51■□□□□ 0.39
TRIM46-210ENST00000545012 CNPY2Q9Y2B0 182 aa17.51■□□□□ 0.39
TRIM46-210ENST00000545012 OVOS2A0A0G2JMS6 1433 aa17.5■□□□□ 0.39
TRIM46-210ENST00000545012 ABCA3Q99758 1704 aa17.5■□□□□ 0.39
TRIM46-210ENST00000545012 LARGE1O95461 756 aa17.5■□□□□ 0.39
TRIM46-210ENST00000545012 HSP90B1P14625 803 aaKnown RBP17.5■□□□□ 0.39
TRIM46-210ENST00000545012 MYD88Q99836 296 aa17.5■□□□□ 0.39
TRIM46-210ENST00000545012 COL16A1Q07092 1604 aaPredicted RBP17.5■□□□□ 0.39
TRIM46-210ENST00000545012 KLHDC4Q8TBB5 520 aa17.5■□□□□ 0.39
TRIM46-210ENST00000545012 KAZALD1Q96I82 304 aa17.5■□□□□ 0.39
TRIM46-210ENST00000545012 CARD10Q9BWT7 1032 aa17.5■□□□□ 0.39
TRIM46-210ENST00000545012 LSG1Q9H089 658 aaKnown RBP17.5■□□□□ 0.39
TRIM46-210ENST00000545012 SNX14Q9Y5W7 946 aa17.5■□□□□ 0.39
TRIM46-210ENST00000545012 IGKV5-2P06315 115 aa17.49■□□□□ 0.39
TRIM46-210ENST00000545012 GTF2A1P52655 376 aaPredicted RBP17.49■□□□□ 0.39
TRIM46-210ENST00000545012 RUFY2Q8WXA3 655 aa17.49■□□□□ 0.39
TRIM46-210ENST00000545012 CHAF1AQ13111 956 aaPredicted RBP17.49■□□□□ 0.39
TRIM46-210ENST00000545012 CCDC9Q9Y3X0 531 aaKnown RBP17.49■□□□□ 0.39
TRIM46-210ENST00000545012 USP16Q9Y5T5 823 aa17.49■□□□□ 0.39
TRIM46-210ENST00000545012 RAD51AP2Q09MP3 1159 aa17.49■□□□□ 0.39
TRIM46-210ENST00000545012 INTS4Q96HW7 963 aaKnown RBP17.49■□□□□ 0.39
TRIM46-210ENST00000545012 EPB41L2O43491 1005 aaKnown RBP17.48■□□□□ 0.39
TRIM46-210ENST00000545012 IL2RBP14784 551 aa17.48■□□□□ 0.39
TRIM46-210ENST00000545012 KRT222Q8N1A0 295 aa17.48■□□□□ 0.39
TRIM46-210ENST00000545012 MEGF6O75095 1541 aa17.48■□□□□ 0.39
TRIM46-210ENST00000545012 RPAP1Q9BWH6 1393 aaPredicted RBP17.48■□□□□ 0.39
TRIM46-210ENST00000545012 SASH1O94885 1247 aa17.48■□□□□ 0.39
TRIM46-210ENST00000545012 HNRNPH2P55795 449 aaKnown RBP17.48■□□□□ 0.39
TRIM46-210ENST00000545012 KIF18AQ8NI77 898 aa17.47■□□□□ 0.39
TRIM46-210ENST00000545012 EAF2Q96CJ1 260 aaPredicted RBP17.47■□□□□ 0.39
TRIM46-210ENST00000545012 TTC12Q9H892 705 aaPredicted RBP17.47■□□□□ 0.39
TRIM46-210ENST00000545012 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.47■□□□□ 0.39
TRIM46-210ENST00000545012 KDM6AO15550 1401 aaPredicted RBP17.47■□□□□ 0.39
TRIM46-210ENST00000545012 USP42Q9H9J4 1324 aaKnown RBP17.47■□□□□ 0.39
TRIM46-210ENST00000545012 MYCBPQ99417 103 aaPredicted RBP17.47■□□□□ 0.39
TRIM46-210ENST00000545012 USP25Q9UHP3 1055 aa17.47■□□□□ 0.39
TRIM46-210ENST00000545012 JCADQ9P266 1359 aa17.47■□□□□ 0.39
TRIM46-210ENST00000545012 NEURL1BA8MQ27 555 aa17.46■□□□□ 0.39
TRIM46-210ENST00000545012 DHX16O60231 1041 aaKnown RBP17.46■□□□□ 0.39
TRIM46-210ENST00000545012 ANKRD13DQ6ZTN6 518 aa17.46■□□□□ 0.39
TRIM46-210ENST00000545012 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.46■□□□□ 0.39
TRIM46-210ENST00000545012 CYP27B1O15528 508 aa17.46■□□□□ 0.39
TRIM46-210ENST00000545012 SNRPA1P09661 255 aaKnown RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms