RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	NUDT16	Q96DE0	195 aa	Known RBP	7.55	□□□□□ -1.2
RAP1B-231	ENST00000544639	PODXL2	Q9NZ53	605 aa		7.55	□□□□□ -1.2
RAP1B-231	ENST00000544639	MARK1	Q9P0L2	795 aa		7.55	□□□□□ -1.2
RAP1B-231	ENST00000544639	MKL2	Q9ULH7	1088 aa		7.55	□□□□□ -1.2
RAP1B-231	ENST00000544639	KCNMB2	Q9Y691	235 aa		7.55	□□□□□ -1.2
RAP1B-231	ENST00000544639	ITGB2	P05107	769 aa		7.54	□□□□□ -1.2
RAP1B-231	ENST00000544639	CD33	P20138	364 aa		7.54	□□□□□ -1.2
RAP1B-231	ENST00000544639	FAM182B	Q5T319	152 aa		7.54	□□□□□ -1.2
RAP1B-231	ENST00000544639	SLCO4C1	Q6ZQN7	724 aa		7.54	□□□□□ -1.2
RAP1B-231	ENST00000544639	GJD3	Q8N144	294 aa		7.54	□□□□□ -1.2
RAP1B-231	ENST00000544639	CMTR1	Q8N1G2	835 aa	Known RBP	7.54	□□□□□ -1.2
RAP1B-231	ENST00000544639	EDARADD	Q8WWZ3	215 aa		7.54	□□□□□ -1.2
RAP1B-231	ENST00000544639	CITED4	Q96RK1	184 aa		7.54	□□□□□ -1.2
RAP1B-231	ENST00000544639	SPOCK3	Q9BQ16	436 aa		7.54	□□□□□ -1.2
RAP1B-231	ENST00000544639	RBCK1	Q9BYM8	510 aa		7.54	□□□□□ -1.2
RAP1B-231	ENST00000544639	C11orf16	Q9NQ32	467 aa		7.54	□□□□□ -1.2
RAP1B-231	ENST00000544639	BMP4	P12644	408 aa		7.53	□□□□□ -1.2
RAP1B-231	ENST00000544639	PCSK2	P16519	638 aa		7.53	□□□□□ -1.2
RAP1B-231	ENST00000544639	USP5	P45974	858 aa		7.53	□□□□□ -1.2
RAP1B-231	ENST00000544639	MFAP1	P55081	439 aa	Known RBP	7.53	□□□□□ -1.2
RAP1B-231	ENST00000544639	SNRPN	P63162	240 aa	Known RBP	7.53	□□□□□ -1.2
RAP1B-231	ENST00000544639	C1orf229	Q6ZS94	237 aa	Predicted RBP	7.53	□□□□□ -1.2
RAP1B-231	ENST00000544639	C2CD2L	O14523	706 aa		7.52	□□□□□ -1.21
RAP1B-231	ENST00000544639	EGFR	P00533	1210 aa		7.52	□□□□□ -1.21
RAP1B-231	ENST00000544639	IGHA2	P01877	340 aa		7.52	□□□□□ -1.21
RAP1B-231	ENST00000544639	RPLP1	P05386	114 aa	Known RBP	7.52	□□□□□ -1.21
RAP1B-231	ENST00000544639	GRIN2C	Q14957	1233 aa		7.52	□□□□□ -1.21
RAP1B-231	ENST00000544639	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	7.52	□□□□□ -1.21
RAP1B-231	ENST00000544639	FAM129B	Q96TA1	746 aa		7.52	□□□□□ -1.21
RAP1B-231	ENST00000544639	GGNBP2	Q9H3C7	697 aa		7.52	□□□□□ -1.21
RAP1B-231	ENST00000544639	UBAP1L	F5GYI3	381 aa		7.51	□□□□□ -1.21
RAP1B-231	ENST00000544639	PIK3R2	O00459	728 aa		7.51	□□□□□ -1.21
RAP1B-231	ENST00000544639	XYLB	O75191	536 aa		7.51	□□□□□ -1.21
RAP1B-231	ENST00000544639	PROC	P04070	461 aa		7.51	□□□□□ -1.21
RAP1B-231	ENST00000544639	ARAF	P10398	606 aa		7.51	□□□□□ -1.21
RAP1B-231	ENST00000544639	CTBS	Q01459	385 aa		7.51	□□□□□ -1.21
RAP1B-231	ENST00000544639	SPEM2	Q0P670	501 aa		7.51	□□□□□ -1.21
RAP1B-231	ENST00000544639	ASB16	Q96NS5	453 aa		7.51	□□□□□ -1.21
RAP1B-231	ENST00000544639	SLC30A3	Q99726	388 aa		7.51	□□□□□ -1.21
RAP1B-231	ENST00000544639	GSX2	Q9BZM3	304 aa		7.51	□□□□□ -1.21
RAP1B-231	ENST00000544639	FNDC3A	Q9Y2H6	1198 aa	Known RBP	7.51	□□□□□ -1.21
RAP1B-231	ENST00000544639	HOXB4	P17483	251 aa	Predicted RBP	7.5	□□□□□ -1.21
RAP1B-231	ENST00000544639	PDE3B	Q13370	1112 aa		7.5	□□□□□ -1.21
RAP1B-231	ENST00000544639	CCIN	Q13939	588 aa		7.5	□□□□□ -1.21
RAP1B-231	ENST00000544639	C8orf34	Q49A92	452 aa		7.5	□□□□□ -1.21
RAP1B-231	ENST00000544639	TMC7	Q7Z402	723 aa		7.5	□□□□□ -1.21
RAP1B-231	ENST00000544639	GGA1	Q9UJY5	639 aa		7.5	□□□□□ -1.21
RAP1B-231	ENST00000544639		A6NHS1	94 aa		7.49	□□□□□ -1.21
RAP1B-231	ENST00000544639	GPR182	O15218	404 aa		7.49	□□□□□ -1.21
RAP1B-231	ENST00000544639	ADAM23	O75077	832 aa		7.49	□□□□□ -1.21
RAP1B-231	ENST00000544639	EHHADH	Q08426	723 aa		7.49	□□□□□ -1.21
RAP1B-231	ENST00000544639	PDE12	Q6L8Q7	609 aa	Known RBP	7.49	□□□□□ -1.21
RAP1B-231	ENST00000544639	XKR5	Q6UX68	686 aa		7.49	□□□□□ -1.21
RAP1B-231	ENST00000544639	LINC00114	Q6XXX2	140 aa		7.49	□□□□□ -1.21
RAP1B-231	ENST00000544639	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	7.49	□□□□□ -1.21
RAP1B-231	ENST00000544639	DMRTB1	Q96MA1	342 aa		7.49	□□□□□ -1.21
RAP1B-231	ENST00000544639	RRAGC	Q9HB90	399 aa		7.49	□□□□□ -1.21
RAP1B-231	ENST00000544639	AVEN	Q9NQS1	362 aa	Predicted RBP	7.49	□□□□□ -1.21
RAP1B-231	ENST00000544639	CCDC9	Q9Y3X0	531 aa	Known RBP	7.49	□□□□□ -1.21
RAP1B-231	ENST00000544639	EPX	P11678	715 aa		7.48	□□□□□ -1.21
RAP1B-231	ENST00000544639	TTC16	Q8NEE8	873 aa		7.48	□□□□□ -1.21
RAP1B-231	ENST00000544639	TMC1	Q8TDI8	760 aa		7.48	□□□□□ -1.21
RAP1B-231	ENST00000544639	EFCC1	Q9HA90	598 aa		7.48	□□□□□ -1.21
RAP1B-231	ENST00000544639	KRBA1	A5PL33	1030 aa		7.47	□□□□□ -1.21
RAP1B-231	ENST00000544639	TREH	O43280	583 aa		7.47	□□□□□ -1.21
RAP1B-231	ENST00000544639	SASH3	O75995	380 aa		7.47	□□□□□ -1.21
RAP1B-231	ENST00000544639	AMPD1	P23109	780 aa		7.47	□□□□□ -1.21
RAP1B-231	ENST00000544639	COL8A1	P27658	744 aa		7.47	□□□□□ -1.21
RAP1B-231	ENST00000544639	ZNF468	Q5VIY5	522 aa	Predicted RBP	7.47	□□□□□ -1.21
RAP1B-231	ENST00000544639	KRT25	Q7Z3Z0	450 aa		7.47	□□□□□ -1.21
RAP1B-231	ENST00000544639	ZNF438	Q7Z4V0	828 aa		7.47	□□□□□ -1.21
RAP1B-231	ENST00000544639	RAB44	Q7Z6P3	723 aa	Predicted RBP	7.47	□□□□□ -1.21
RAP1B-231	ENST00000544639	NLRP13	Q86W25	1043 aa		7.47	□□□□□ -1.21
RAP1B-231	ENST00000544639	ALKBH8	Q96BT7	664 aa	Known RBP	7.47	□□□□□ -1.21
RAP1B-231	ENST00000544639	BTBD6	Q96KE9	485 aa		7.47	□□□□□ -1.21
RAP1B-231	ENST00000544639	ELP3	Q9H9T3	547 aa		7.47	□□□□□ -1.21
RAP1B-231	ENST00000544639	ZFAT	Q9P243	1243 aa		7.47	□□□□□ -1.21
RAP1B-231	ENST00000544639	ANKRD33B	A6NCL7	494 aa		7.46	□□□□□ -1.22
RAP1B-231	ENST00000544639	GNB5	O14775	395 aa		7.46	□□□□□ -1.22
RAP1B-231	ENST00000544639	NFKB1	P19838	968 aa		7.46	□□□□□ -1.22
RAP1B-231	ENST00000544639	TARS	P26639	723 aa	Known RBP	7.46	□□□□□ -1.22
RAP1B-231	ENST00000544639	DSC3	Q14574	896 aa		7.46	□□□□□ -1.22
RAP1B-231	ENST00000544639	BHMT	Q93088	406 aa		7.46	□□□□□ -1.22
RAP1B-231	ENST00000544639	PNMA5	Q96PV4	448 aa		7.46	□□□□□ -1.22
RAP1B-231	ENST00000544639	TMEM63C	Q9P1W3	806 aa		7.46	□□□□□ -1.22
RAP1B-231	ENST00000544639	PRR12	Q9ULL5	1215 aa		7.46	□□□□□ -1.22
RAP1B-231	ENST00000544639	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	7.46	□□□□□ -1.22
RAP1B-231	ENST00000544639	MAP3K6	O95382	1288 aa		7.45	□□□□□ -1.22
RAP1B-231	ENST00000544639	RARA	P10276	462 aa		7.45	□□□□□ -1.22
RAP1B-231	ENST00000544639	ERCC3	P19447	782 aa		7.45	□□□□□ -1.22
RAP1B-231	ENST00000544639	ADH6	P28332	368 aa		7.45	□□□□□ -1.22
RAP1B-231	ENST00000544639	DGKG	P49619	791 aa		7.45	□□□□□ -1.22
RAP1B-231	ENST00000544639	NEUROD1	Q13562	356 aa		7.45	□□□□□ -1.22
RAP1B-231	ENST00000544639	NPAS4	Q8IUM7	802 aa		7.45	□□□□□ -1.22
RAP1B-231	ENST00000544639	SNX29	Q8TEQ0	813 aa		7.45	□□□□□ -1.22
RAP1B-231	ENST00000544639	ABI2	Q9NYB9	513 aa	Predicted RBP	7.45	□□□□□ -1.22
RAP1B-231	ENST00000544639	NEURL1B	A8MQ27	555 aa		7.44	□□□□□ -1.22
RAP1B-231	ENST00000544639	MMP20	O60882	483 aa		7.44	□□□□□ -1.22
RAP1B-231	ENST00000544639	TNFRSF21	O75509	655 aa		7.44	□□□□□ -1.22
RAP1B-231	ENST00000544639	FMR1	Q06787	632 aa	Known RBP eCLIP	7.44	□□□□□ -1.22

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