RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 ABCC12Q96J65 1359 aa8.52□□□□□ -1.05
CDCA3-209ENST00000544610 ITGBL1O95965 494 aaPredicted RBP8.52□□□□□ -1.05
CDCA3-209ENST00000544610 ALDH1B1P30837 517 aa8.52□□□□□ -1.05
CDCA3-209ENST00000544610 TMPOP42166 694 aaKnown RBP8.52□□□□□ -1.05
CDCA3-209ENST00000544610 TAF7Q15545 349 aaPredicted RBP8.52□□□□□ -1.05
CDCA3-209ENST00000544610 HLFQ16534 295 aa8.52□□□□□ -1.05
CDCA3-209ENST00000544610 CRY2Q49AN0 593 aa8.52□□□□□ -1.05
CDCA3-209ENST00000544610 OLFM4Q6UX06 510 aa8.52□□□□□ -1.05
CDCA3-209ENST00000544610 WWC1Q8IX03 1113 aa8.52□□□□□ -1.05
CDCA3-209ENST00000544610 TRMT2AQ8IZ69 625 aaKnown RBP8.52□□□□□ -1.05
CDCA3-209ENST00000544610 RYDENQ9NUL5 291 aaKnown RBP8.52□□□□□ -1.05
CDCA3-209ENST00000544610 BABAM1Q9NWV8 329 aa8.52□□□□□ -1.05
CDCA3-209ENST00000544610 IBTKQ9P2D0 1353 aaPredicted RBP8.51□□□□□ -1.05
CDCA3-209ENST00000544610 TMEM88BA6NKF7 163 aa8.51□□□□□ -1.05
CDCA3-209ENST00000544610 FAM177BA6PVY3 158 aa8.51□□□□□ -1.05
CDCA3-209ENST00000544610 ERVV-1B6SEH8 477 aa8.51□□□□□ -1.05
CDCA3-209ENST00000544610 E9PSI1 815 aa8.51□□□□□ -1.05
CDCA3-209ENST00000544610 FZD9O00144 591 aa8.51□□□□□ -1.05
CDCA3-209ENST00000544610 CT47B1P0C2W7 299 aaPredicted RBP8.51□□□□□ -1.05
CDCA3-209ENST00000544610 EPHX2P34913 555 aa8.51□□□□□ -1.05
CDCA3-209ENST00000544610 IARSP41252 1262 aaKnown RBP8.51□□□□□ -1.05
CDCA3-209ENST00000544610 GOLGA2Q08379 1002 aa8.51□□□□□ -1.05
CDCA3-209ENST00000544610 PSMD1Q99460 953 aa8.51□□□□□ -1.05
CDCA3-209ENST00000544610 NYXQ9GZU5 481 aa8.51□□□□□ -1.05
CDCA3-209ENST00000544610 HACL1Q9UJ83 578 aa8.51□□□□□ -1.05
CDCA3-209ENST00000544610 RNF123Q5XPI4 1314 aa8.51□□□□□ -1.05
CDCA3-209ENST00000544610 COL4A5P29400 1685 aa8.5□□□□□ -1.05
CDCA3-209ENST00000544610 FOXN1O15353 648 aa8.5□□□□□ -1.05
CDCA3-209ENST00000544610 GTF2E1P29083 439 aaPredicted RBP8.5□□□□□ -1.05
CDCA3-209ENST00000544610 EAPPQ56P03 285 aaPredicted RBP8.5□□□□□ -1.05
CDCA3-209ENST00000544610 PNMA8AQ86V59 439 aaPredicted RBP8.5□□□□□ -1.05
CDCA3-209ENST00000544610 GPC2Q8N158 579 aa8.5□□□□□ -1.05
CDCA3-209ENST00000544610 SYNE4Q8N205 404 aa8.5□□□□□ -1.05
CDCA3-209ENST00000544610 FAM212AQ96EL1 285 aa8.5□□□□□ -1.05
CDCA3-209ENST00000544610 MIS18AQ9NYP9 233 aa8.5□□□□□ -1.05
CDCA3-209ENST00000544610 STK24Q9Y6E0 443 aa8.5□□□□□ -1.05
CDCA3-209ENST00000544610 MAP3K15Q6ZN16 1313 aa8.5□□□□□ -1.05
CDCA3-209ENST00000544610 HOXA10P31260 410 aaPredicted RBP8.49□□□□□ -1.05
CDCA3-209ENST00000544610 VEGFBP49765 207 aa8.49□□□□□ -1.05
CDCA3-209ENST00000544610 ATN1P54259 1190 aaPredicted RBP8.49□□□□□ -1.05
CDCA3-209ENST00000544610 EIF4A1P60842 406 aaKnown RBP8.49□□□□□ -1.05
CDCA3-209ENST00000544610 CC2D2BQ6DHV5 1058 aa8.49□□□□□ -1.05
CDCA3-209ENST00000544610 NUTM1Q86Y26 1132 aa8.49□□□□□ -1.05
CDCA3-209ENST00000544610 ZNF428Q96B54 188 aa8.49□□□□□ -1.05
CDCA3-209ENST00000544610 YTHDC1Q96MU7 727 aaKnown RBP8.49□□□□□ -1.05
CDCA3-209ENST00000544610 MYH16Q9H6N6 1097 aa8.49□□□□□ -1.05
CDCA3-209ENST00000544610 PRDM10Q9NQV6 1147 aa8.49□□□□□ -1.05
CDCA3-209ENST00000544610 UBN2Q6ZU65 1347 aa8.49□□□□□ -1.05
CDCA3-209ENST00000544610 LTBP1Q14766 1721 aa8.49□□□□□ -1.05
CDCA3-209ENST00000544610 THSD7BQ9C0I4 1608 aa8.48□□□□□ -1.05
CDCA3-209ENST00000544610 POTEFA5A3E0 1075 aa8.48□□□□□ -1.05
CDCA3-209ENST00000544610 RASSF10A6NK89 507 aa8.48□□□□□ -1.05
CDCA3-209ENST00000544610 RIPK4P57078 832 aa8.48□□□□□ -1.05
CDCA3-209ENST00000544610 SLFN5Q08AF3 891 aa8.48□□□□□ -1.05
CDCA3-209ENST00000544610 GRIPAP1Q4V328 841 aa8.48□□□□□ -1.05
CDCA3-209ENST00000544610 MAP1SQ66K74 1059 aaPredicted RBP8.48□□□□□ -1.05
CDCA3-209ENST00000544610 KIF6Q6ZMV9 814 aa8.48□□□□□ -1.05
CDCA3-209ENST00000544610 TTLL7Q6ZT98 887 aa8.48□□□□□ -1.05
CDCA3-209ENST00000544610 CCDC146Q8IYE0 955 aa8.48□□□□□ -1.05
CDCA3-209ENST00000544610 CNTROBQ8N137 903 aa8.48□□□□□ -1.05
CDCA3-209ENST00000544610 JDP2Q8WYK2 163 aa8.48□□□□□ -1.05
CDCA3-209ENST00000544610 RPGRQ92834 1020 aaKnown RBP8.48□□□□□ -1.05
CDCA3-209ENST00000544610 TMEM121BQ9BXQ6 578 aaPredicted RBP8.48□□□□□ -1.05
CDCA3-209ENST00000544610 CHMP4AQ9BY43 222 aa8.48□□□□□ -1.05
CDCA3-209ENST00000544610 TRIM35Q9UPQ4 493 aa8.48□□□□□ -1.05
CDCA3-209ENST00000544610 ERBB4Q15303 1308 aa8.48□□□□□ -1.05
CDCA3-209ENST00000544610 NUP98P52948 1817 aa8.47□□□□□ -1.05
CDCA3-209ENST00000544610 DLG5Q8TDM6 1919 aa8.47□□□□□ -1.05
CDCA3-209ENST00000544610 NTSR2O95665 410 aa8.47□□□□□ -1.05
CDCA3-209ENST00000544610 CTCFP49711 727 aaPredicted RBP8.47□□□□□ -1.05
CDCA3-209ENST00000544610 SCNN1DP51172 638 aa8.47□□□□□ -1.05
CDCA3-209ENST00000544610 EIF6P56537 245 aaKnown RBP8.47□□□□□ -1.05
CDCA3-209ENST00000544610 SUSD4Q5VX71 490 aa8.47□□□□□ -1.05
CDCA3-209ENST00000544610 ZNF34Q8IZ26 560 aa8.47□□□□□ -1.05
CDCA3-209ENST00000544610 AIDAQ96BJ3 306 aa8.47□□□□□ -1.05
CDCA3-209ENST00000544610 ZBTB3Q9H5J0 574 aa8.47□□□□□ -1.05
CDCA3-209ENST00000544610 IFT57Q9NWB7 429 aa8.47□□□□□ -1.05
CDCA3-209ENST00000544610 WBP1LQ9NX94 342 aa8.47□□□□□ -1.05
CDCA3-209ENST00000544610 RRP7AQ9Y3A4 280 aaKnown RBP8.47□□□□□ -1.05
CDCA3-209ENST00000544610 PPEF1O14829 653 aaPredicted RBP8.46□□□□□ -1.06
CDCA3-209ENST00000544610 ZNF853P0CG23 659 aa8.46□□□□□ -1.06
CDCA3-209ENST00000544610 MYL6BP14649 208 aa8.46□□□□□ -1.06
CDCA3-209ENST00000544610 GPTP24298 496 aa8.46□□□□□ -1.06
CDCA3-209ENST00000544610 GNAI1P63096 354 aa8.46□□□□□ -1.06
CDCA3-209ENST00000544610 DEFB115Q30KQ5 88 aa8.46□□□□□ -1.06
CDCA3-209ENST00000544610 DUSP27Q5VZP5 1158 aa8.46□□□□□ -1.06
CDCA3-209ENST00000544610 GIGYF2Q6Y7W6 1299 aaKnown RBP8.46□□□□□ -1.06
CDCA3-209ENST00000544610 C3orf67Q6ZVT6 689 aa8.46□□□□□ -1.06
CDCA3-209ENST00000544610 LRP10Q7Z4F1 713 aa8.46□□□□□ -1.06
CDCA3-209ENST00000544610 SLC51AQ86UW1 340 aa8.46□□□□□ -1.06
CDCA3-209ENST00000544610 RBM17Q96I25 401 aaKnown RBP8.46□□□□□ -1.06
CDCA3-209ENST00000544610 CRAMP1Q96RY5 1269 aa8.46□□□□□ -1.06
CDCA3-209ENST00000544610 THUMPD2Q9BTF0 503 aaKnown RBP8.46□□□□□ -1.06
CDCA3-209ENST00000544610 DAXXQ9UER7 740 aaPredicted RBP8.46□□□□□ -1.06
CDCA3-209ENST00000544610 GJA3Q9Y6H8 435 aa8.46□□□□□ -1.06
CDCA3-209ENST00000544610 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.45□□□□□ -1.06
CDCA3-209ENST00000544610 LMOD1P29536 600 aaPredicted RBP8.45□□□□□ -1.06
CDCA3-209ENST00000544610 PARP10Q53GL7 1025 aa8.45□□□□□ -1.06
CDCA3-209ENST00000544610 USP50Q70EL3 339 aaPredicted RBP8.45□□□□□ -1.06
CDCA3-209ENST00000544610 PPP1R42Q7Z4L9 355 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms