RNA–Protein interactions for RNA: ENST00000544454.5

LTBR-213, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-213ENST00000544454 CTSWP56202 376 aa17.33■□□□□ 0.36
LTBR-213ENST00000544454 TMC4Q7Z404 712 aa17.33■□□□□ 0.36
LTBR-213ENST00000544454 TMX4Q9H1E5 349 aaPredicted RBP17.33■□□□□ 0.36
LTBR-213ENST00000544454 NFKBIEO00221 500 aa17.32■□□□□ 0.36
LTBR-213ENST00000544454 CCT4P50991 539 aaKnown RBP17.32■□□□□ 0.36
LTBR-213ENST00000544454 TTLL11Q8NHH1 800 aa17.32■□□□□ 0.36
LTBR-213ENST00000544454 ATP6V0A2Q9Y487 856 aa17.32■□□□□ 0.36
LTBR-213ENST00000544454 ARFGEF1Q9Y6D6 1849 aa17.32■□□□□ 0.36
LTBR-213ENST00000544454 UTYO14607 1347 aa17.31■□□□□ 0.36
LTBR-213ENST00000544454 LTBP3Q9NS15 1303 aa17.31■□□□□ 0.36
LTBR-213ENST00000544454 CSF1RP07333 972 aa17.31■□□□□ 0.36
LTBR-213ENST00000544454 LMNB1P20700 586 aa17.31■□□□□ 0.36
LTBR-213ENST00000544454 RPS8P62241 208 aaKnown RBP17.31■□□□□ 0.36
LTBR-213ENST00000544454 SP8Q8IXZ3 490 aa17.31■□□□□ 0.36
LTBR-213ENST00000544454 SLX4Q8IY92 1834 aa17.31■□□□□ 0.36
LTBR-213ENST00000544454 C9orf131Q5VYM1 1079 aa17.3■□□□□ 0.36
LTBR-213ENST00000544454 OLFM4Q6UX06 510 aa17.3■□□□□ 0.36
LTBR-213ENST00000544454 ATF7IPQ6VMQ6 1270 aa17.3■□□□□ 0.36
LTBR-213ENST00000544454 FRAT1Q92837 279 aaPredicted RBP17.3■□□□□ 0.36
LTBR-213ENST00000544454 CELF1Q92879 486 aaKnown RBP17.3■□□□□ 0.36
LTBR-213ENST00000544454 TAOK3Q9H2K8 898 aa17.3■□□□□ 0.36
LTBR-213ENST00000544454 RTL9Q8NET4 1388 aa17.29■□□□□ 0.36
LTBR-213ENST00000544454 FOXO4P98177 505 aa17.29■□□□□ 0.36
LTBR-213ENST00000544454 FKBP4Q02790 459 aaKnown RBP eCLIP17.29■□□□□ 0.36
LTBR-213ENST00000544454 RASSF7Q02833 373 aa17.29■□□□□ 0.36
LTBR-213ENST00000544454 USP44Q9H0E7 712 aa17.29■□□□□ 0.36
LTBR-213ENST00000544454 SEC31BQ9NQW1 1179 aa17.29■□□□□ 0.36
LTBR-213ENST00000544454 DDX60Q8IY21 1712 aaKnown RBP17.28■□□□□ 0.36
LTBR-213ENST00000544454 NBPF7P0C2Y1 421 aaPredicted RBP17.28■□□□□ 0.36
LTBR-213ENST00000544454 TRIM27P14373 513 aa17.28■□□□□ 0.36
LTBR-213ENST00000544454 ZKSCAN2Q63HK3 967 aa17.28■□□□□ 0.36
LTBR-213ENST00000544454 CCDC85AQ96PX6 553 aaPredicted RBP17.28■□□□□ 0.36
LTBR-213ENST00000544454 PSMD1Q99460 953 aa17.28■□□□□ 0.36
LTBR-213ENST00000544454 GREM2Q9H772 168 aa17.28■□□□□ 0.36
LTBR-213ENST00000544454 PRELPP51888 382 aa17.27■□□□□ 0.36
LTBR-213ENST00000544454 INTS3Q68E01 1043 aaKnown RBP17.27■□□□□ 0.36
LTBR-213ENST00000544454 CDC5LQ99459 802 aaKnown RBP17.27■□□□□ 0.36
LTBR-213ENST00000544454 RNF181Q9P0P0 153 aa17.27■□□□□ 0.36
LTBR-213ENST00000544454 ANKRD18AQ8IVF6 992 aa17.26■□□□□ 0.35
LTBR-213ENST00000544454 YTHDC1Q96MU7 727 aaKnown RBP17.26■□□□□ 0.35
LTBR-213ENST00000544454 SNED1Q8TER0 1413 aa17.25■□□□□ 0.35
LTBR-213ENST00000544454 ITGA6P23229 1130 aa17.25■□□□□ 0.35
LTBR-213ENST00000544454 EPHA10Q5JZY3 1008 aa17.25■□□□□ 0.35
LTBR-213ENST00000544454 LMBR1LQ6UX01 489 aa17.25■□□□□ 0.35
LTBR-213ENST00000544454 MPNDQ8N594 471 aa17.25■□□□□ 0.35
LTBR-213ENST00000544454 KAZALD1Q96I82 304 aa17.25■□□□□ 0.35
LTBR-213ENST00000544454 SUCLG2Q96I99 432 aa17.25■□□□□ 0.35
LTBR-213ENST00000544454 RCAN3Q9UKA8 241 aa17.25■□□□□ 0.35
LTBR-213ENST00000544454 HDAC5Q9UQL6 1122 aa17.25■□□□□ 0.35
LTBR-213ENST00000544454 ZC3H4Q9UPT8 1303 aaKnown RBP17.24■□□□□ 0.35
LTBR-213ENST00000544454 IFIT5Q13325 482 aaKnown RBP17.24■□□□□ 0.35
LTBR-213ENST00000544454 DPP8Q6V1X1 898 aaPredicted RBP17.24■□□□□ 0.35
LTBR-213ENST00000544454 SUPT20HQ8NEM7 779 aa17.24■□□□□ 0.35
LTBR-213ENST00000544454 RTFDC1Q9BY42 306 aaPredicted RBP17.24■□□□□ 0.35
LTBR-213ENST00000544454 VPS33BQ9H267 617 aa17.24■□□□□ 0.35
LTBR-213ENST00000544454 ZNF277Q9NRM2 450 aaPredicted RBP17.24■□□□□ 0.35
LTBR-213ENST00000544454 BSDC1Q9NW68 430 aaPredicted RBP17.24■□□□□ 0.35
LTBR-213ENST00000544454 LAMB2P55268 1798 aa17.24■□□□□ 0.35
LTBR-213ENST00000544454 CHD4Q14839 1912 aa17.23■□□□□ 0.35
LTBR-213ENST00000544454 ANKRD18BA2A2Z9 1011 aa17.23■□□□□ 0.35
LTBR-213ENST00000544454 FAM161AQ3B820 660 aa17.23■□□□□ 0.35
LTBR-213ENST00000544454 SLC51AQ86UW1 340 aa17.23■□□□□ 0.35
LTBR-213ENST00000544454 CLUAP1Q96AJ1 413 aa17.23■□□□□ 0.35
LTBR-213ENST00000544454 IGHMBP2P38935 993 aaKnown RBP17.22■□□□□ 0.35
LTBR-213ENST00000544454 IARSP41252 1262 aaKnown RBP17.22■□□□□ 0.35
LTBR-213ENST00000544454 CCDC57Q2TAC2 916 aa17.22■□□□□ 0.35
LTBR-213ENST00000544454 RABL6Q3YEC7 729 aaPredicted RBP17.22■□□□□ 0.35
LTBR-213ENST00000544454 ZNF784Q8NCA9 323 aaPredicted RBP17.22■□□□□ 0.35
LTBR-213ENST00000544454 BICC1Q9H694 974 aaKnown RBP17.22■□□□□ 0.35
LTBR-213ENST00000544454 NSFL1CQ9UNZ2 370 aaKnown RBP17.22■□□□□ 0.35
LTBR-213ENST00000544454 CHMP3Q9Y3E7 222 aa17.22■□□□□ 0.35
LTBR-213ENST00000544454 FER1L6Q2WGJ9 1857 aa17.21■□□□□ 0.35
LTBR-213ENST00000544454 GNAI3P08754 354 aa17.21■□□□□ 0.35
LTBR-213ENST00000544454 UBTFL1P0CB47 393 aaPredicted RBP17.21■□□□□ 0.35
LTBR-213ENST00000544454 DZIP1LQ8IYY4 767 aaKnown RBP17.21■□□□□ 0.35
LTBR-213ENST00000544454 MPHOSPH8Q99549 860 aa17.21■□□□□ 0.35
LTBR-213ENST00000544454 PODXL2Q9NZ53 605 aa17.21■□□□□ 0.35
LTBR-213ENST00000544454 TNNQ9UQP3 1299 aa17.21■□□□□ 0.35
LTBR-213ENST00000544454 MS4A1P11836 297 aa17.2■□□□□ 0.34
LTBR-213ENST00000544454 GPSM2P81274 684 aa17.2■□□□□ 0.34
LTBR-213ENST00000544454 FTSJ3Q8IY81 847 aaKnown RBP17.2■□□□□ 0.34
LTBR-213ENST00000544454 TMEM57Q8N5G2 664 aa17.2■□□□□ 0.34
LTBR-213ENST00000544454 ANKRD44Q8N8A2 993 aa17.2■□□□□ 0.34
LTBR-213ENST00000544454 MINPP1Q9UNW1 487 aa17.2■□□□□ 0.34
LTBR-213ENST00000544454 CACNA1SQ13698 1873 aa17.19■□□□□ 0.34
LTBR-213ENST00000544454 JDP2Q8WYK2 163 aa17.19■□□□□ 0.34
LTBR-213ENST00000544454 MEIS3Q99687 375 aa17.19■□□□□ 0.34
LTBR-213ENST00000544454 ANKIB1Q9P2G1 1089 aa17.19■□□□□ 0.34
LTBR-213ENST00000544454 TAF7LQ5H9L4 462 aa17.18■□□□□ 0.34
LTBR-213ENST00000544454 DPY19L2Q6NUT2 758 aa17.18■□□□□ 0.34
LTBR-213ENST00000544454 LARGE2Q8N3Y3 721 aa17.18■□□□□ 0.34
LTBR-213ENST00000544454 TBC1D16Q8TBP0 767 aa17.18■□□□□ 0.34
LTBR-213ENST00000544454 POLLQ9UGP5 575 aa17.18■□□□□ 0.34
LTBR-213ENST00000544454 XDHP47989 1333 aa17.18■□□□□ 0.34
LTBR-213ENST00000544454 COL4A1P02462 1669 aa17.17■□□□□ 0.34
LTBR-213ENST00000544454 GLTPD2A6NH11 291 aa17.17■□□□□ 0.34
LTBR-213ENST00000544454 C6orf229H3BNL8 230 aa17.17■□□□□ 0.34
LTBR-213ENST00000544454 PPIP5K2O43314 1243 aa17.17■□□□□ 0.34
LTBR-213ENST00000544454 KIAA2012Q0VF49 1180 aa17.17■□□□□ 0.34
LTBR-213ENST00000544454 WASHC4Q2M389 1173 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 164 ms