RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 DUOX1Q9NRD9 1551 aa20.46■□□□□ 0.87
CD4-212ENST00000544344 CIAPIN1Q6FI81 312 aa20.45■□□□□ 0.86
CD4-212ENST00000544344 TRPM4Q8TD43 1214 aa20.45■□□□□ 0.86
CD4-212ENST00000544344 ZC3H15Q8WU90 426 aaKnown RBP20.45■□□□□ 0.86
CD4-212ENST00000544344 SHTN1A0MZ66 631 aa20.44■□□□□ 0.86
CD4-212ENST00000544344 YDJCA8MPS7 323 aa20.44■□□□□ 0.86
CD4-212ENST00000544344 BBOX1O75936 387 aa20.44■□□□□ 0.86
CD4-212ENST00000544344 RAD17O75943 681 aa20.44■□□□□ 0.86
CD4-212ENST00000544344 ANXA1P04083 346 aa20.44■□□□□ 0.86
CD4-212ENST00000544344 NEFMP07197 916 aa20.44■□□□□ 0.86
CD4-212ENST00000544344 BRPF1P55201 1214 aaPredicted RBP20.44■□□□□ 0.86
CD4-212ENST00000544344 DPP8Q6V1X1 898 aaPredicted RBP20.44■□□□□ 0.86
CD4-212ENST00000544344 MPNDQ8N594 471 aa20.44■□□□□ 0.86
CD4-212ENST00000544344 MCOLN1Q9GZU1 580 aa20.44■□□□□ 0.86
CD4-212ENST00000544344 TMX4Q9H1E5 349 aaPredicted RBP20.44■□□□□ 0.86
CD4-212ENST00000544344 CA12O43570 354 aa20.43■□□□□ 0.86
CD4-212ENST00000544344 ZIC5Q96T25 663 aa20.43■□□□□ 0.86
CD4-212ENST00000544344 LRRC37AA6NMS7 1700 aa20.43■□□□□ 0.86
CD4-212ENST00000544344 HCLS1P14317 486 aaPredicted RBP20.42■□□□□ 0.86
CD4-212ENST00000544344 EIF2S2P20042 333 aaKnown RBP20.42■□□□□ 0.86
CD4-212ENST00000544344 NLRP10Q86W26 655 aa20.42■□□□□ 0.86
CD4-212ENST00000544344 TNIP1Q15025 636 aa20.41■□□□□ 0.86
CD4-212ENST00000544344 DLK2Q6UY11 383 aa20.41■□□□□ 0.86
CD4-212ENST00000544344 CDC37L1Q7L3B6 337 aa20.41■□□□□ 0.86
CD4-212ENST00000544344 BCL2L13Q9BXK5 485 aa20.41■□□□□ 0.86
CD4-212ENST00000544344 ZNF408Q9H9D4 720 aa20.41■□□□□ 0.86
CD4-212ENST00000544344 CNOT7Q9UIV1 285 aaKnown RBP20.41■□□□□ 0.86
CD4-212ENST00000544344 TSPYL4Q9UJ04 414 aa20.41■□□□□ 0.86
CD4-212ENST00000544344 TNRC18O15417 2968 aaPredicted RBP20.41■□□□□ 0.86
CD4-212ENST00000544344 GRAPQ13588 217 aa20.4■□□□□ 0.86
CD4-212ENST00000544344 GRAPLQ8TC17 118 aaPredicted RBP20.4■□□□□ 0.86
CD4-212ENST00000544344 COPS6Q7L5N1 327 aa20.39■□□□□ 0.85
CD4-212ENST00000544344 DDX60Q8IY21 1712 aaKnown RBP20.39■□□□□ 0.85
CD4-212ENST00000544344 COL4A1P02462 1669 aa20.38■□□□□ 0.85
CD4-212ENST00000544344 POLR2AP24928 1970 aaKnown RBP20.38■□□□□ 0.85
CD4-212ENST00000544344 TCIRG1Q13488 830 aa20.38■□□□□ 0.85
CD4-212ENST00000544344 DDX46Q7L014 1031 aaKnown RBP20.38■□□□□ 0.85
CD4-212ENST00000544344 ZBTB12Q9Y330 459 aaPredicted RBP20.38■□□□□ 0.85
CD4-212ENST00000544344 HSP90AB3PQ58FF7 597 aa20.37■□□□□ 0.85
CD4-212ENST00000544344 USP48Q86UV5 1035 aa20.37■□□□□ 0.85
CD4-212ENST00000544344 MICALL2Q8IY33 904 aa20.37■□□□□ 0.85
CD4-212ENST00000544344 XAGE3Q8WTP9 111 aa20.37■□□□□ 0.85
CD4-212ENST00000544344 SH3TC1Q8TE82 1336 aa20.36■□□□□ 0.85
CD4-212ENST00000544344 MAPK8IP3Q9UPT6 1336 aa20.36■□□□□ 0.85
CD4-212ENST00000544344 FAM155AB1AL88 458 aaPredicted RBP20.36■□□□□ 0.85
CD4-212ENST00000544344 EGFRP00533 1210 aa20.36■□□□□ 0.85
CD4-212ENST00000544344 AIMP1Q12904 312 aaKnown RBP20.36■□□□□ 0.85
CD4-212ENST00000544344 NOGQ13253 232 aa20.36■□□□□ 0.85
CD4-212ENST00000544344 DGKZQ13574 1117 aa20.36■□□□□ 0.85
CD4-212ENST00000544344 SAMD7Q7Z3H4 446 aa20.36■□□□□ 0.85
CD4-212ENST00000544344 DPF2Q92785 391 aa20.36■□□□□ 0.85
CD4-212ENST00000544344 BABAM1Q9NWV8 329 aa20.36■□□□□ 0.85
CD4-212ENST00000544344 TRMT112Q9UI30 125 aaKnown RBP20.36■□□□□ 0.85
CD4-212ENST00000544344 H7C1D1 291 aa20.35■□□□□ 0.85
CD4-212ENST00000544344 PSMD14O00487 310 aa20.35■□□□□ 0.85
CD4-212ENST00000544344 HUNKP57058 714 aa20.35■□□□□ 0.85
CD4-212ENST00000544344 NECTIN2Q92692 538 aa20.35■□□□□ 0.85
CD4-212ENST00000544344 RIPK4P57078 832 aa20.34■□□□□ 0.85
CD4-212ENST00000544344 TMC4Q7Z404 712 aa20.34■□□□□ 0.85
CD4-212ENST00000544344 ZNF428Q96B54 188 aa20.34■□□□□ 0.85
CD4-212ENST00000544344 PNNQ9H307 717 aaKnown RBP20.34■□□□□ 0.85
CD4-212ENST00000544344 KRT24Q2M2I5 525 aa20.32■□□□□ 0.84
CD4-212ENST00000544344 WASHC4Q2M389 1173 aa20.32■□□□□ 0.84
CD4-212ENST00000544344 TBC1D10BQ4KMP7 808 aaPredicted RBP20.32■□□□□ 0.84
CD4-212ENST00000544344 CELF1Q92879 486 aaKnown RBP20.32■□□□□ 0.84
CD4-212ENST00000544344 CFAP44Q96MT7 982 aa20.32■□□□□ 0.84
CD4-212ENST00000544344 DBNDD1Q9H9R9 158 aa20.32■□□□□ 0.84
CD4-212ENST00000544344 KCNQ5Q9NR82 932 aa20.32■□□□□ 0.84
CD4-212ENST00000544344 POLLQ9UGP5 575 aa20.32■□□□□ 0.84
CD4-212ENST00000544344 RTL9Q8NET4 1388 aa20.32■□□□□ 0.84
CD4-212ENST00000544344 SF3B3Q15393 1217 aaKnown RBP20.31■□□□□ 0.84
CD4-212ENST00000544344 RGMBQ6NW40 437 aa20.31■□□□□ 0.84
CD4-212ENST00000544344 KRT26Q7Z3Y9 468 aa20.31■□□□□ 0.84
CD4-212ENST00000544344 SCN9AQ15858 1988 aa20.31■□□□□ 0.84
CD4-212ENST00000544344 PDE4DIPQ5VU43 2346 aa20.3■□□□□ 0.84
CD4-212ENST00000544344 ADM5C9JUS6 153 aa20.3■□□□□ 0.84
CD4-212ENST00000544344 TMPOP42166 694 aaKnown RBP20.3■□□□□ 0.84
CD4-212ENST00000544344 ISCA1Q9BUE6 129 aa20.3■□□□□ 0.84
CD4-212ENST00000544344 GBA2Q9HCG7 927 aaPredicted RBP20.3■□□□□ 0.84
CD4-212ENST00000544344 NSFL1CQ9UNZ2 370 aaKnown RBP20.3■□□□□ 0.84
CD4-212ENST00000544344 RIMBP2O15034 1052 aa20.29■□□□□ 0.84
CD4-212ENST00000544344 GPSM2P81274 684 aa20.29■□□□□ 0.84
CD4-212ENST00000544344 FAM89AQ96GI7 184 aa20.29■□□□□ 0.84
CD4-212ENST00000544344 CHPF2Q9P2E5 772 aa20.29■□□□□ 0.84
CD4-212ENST00000544344 ECE2O60344 883 aa20.28■□□□□ 0.84
CD4-212ENST00000544344 RPS12P25398 132 aaKnown RBP20.28■□□□□ 0.84
CD4-212ENST00000544344 KIF23Q02241 960 aaPredicted RBP20.28■□□□□ 0.84
CD4-212ENST00000544344 PLBD2Q8NHP8 589 aa20.28■□□□□ 0.84
CD4-212ENST00000544344 SAGE1Q9NXZ1 904 aa20.28■□□□□ 0.84
CD4-212ENST00000544344 CHL1O00533 1208 aa20.27■□□□□ 0.84
CD4-212ENST00000544344 DOK7Q18PE1 504 aa20.27■□□□□ 0.84
CD4-212ENST00000544344 RBM26Q5T8P6 1007 aaKnown RBP20.27■□□□□ 0.84
CD4-212ENST00000544344 C2orf69Q8N8R5 385 aa20.27■□□□□ 0.84
CD4-212ENST00000544344 CCDC102AQ96A19 550 aa20.27■□□□□ 0.84
CD4-212ENST00000544344 AKAP11Q9UKA4 1901 aa20.26■□□□□ 0.83
CD4-212ENST00000544344 C6orf229H3BNL8 230 aa20.26■□□□□ 0.83
CD4-212ENST00000544344 TBC1D16Q8TBP0 767 aa20.26■□□□□ 0.83
CD4-212ENST00000544344 DCPSQ96C86 337 aaKnown RBP20.26■□□□□ 0.83
CD4-212ENST00000544344 RNF186Q9NXI6 227 aa20.26■□□□□ 0.83
CD4-212ENST00000544344 ASTN2O75129 1339 aaPredicted RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms