RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 FAM155AB1AL88 458 aaPredicted RBP12.62□□□□□ -0.39
C2CD3-220ENST00000544293 RAD17O75943 681 aa12.62□□□□□ -0.39
C2CD3-220ENST00000544293 KIAA2012Q0VF49 1180 aa12.62□□□□□ -0.39
C2CD3-220ENST00000544293 SP8Q8IXZ3 490 aa12.62□□□□□ -0.39
C2CD3-220ENST00000544293 ZC3H15Q8WU90 426 aaKnown RBP12.62□□□□□ -0.39
C2CD3-220ENST00000544293 CFAP53Q96M91 514 aa12.62□□□□□ -0.39
C2CD3-220ENST00000544293 NLRP3Q96P20 1036 aa12.62□□□□□ -0.39
C2CD3-220ENST00000544293 EGFRP00533 1210 aa12.61□□□□□ -0.39
C2CD3-220ENST00000544293 ANXA1P04083 346 aa12.61□□□□□ -0.39
C2CD3-220ENST00000544293 KIF6Q6ZMV9 814 aa12.61□□□□□ -0.39
C2CD3-220ENST00000544293 USP48Q86UV5 1035 aa12.61□□□□□ -0.39
C2CD3-220ENST00000544293 CCER1Q8TC90 406 aaPredicted RBP12.61□□□□□ -0.39
C2CD3-220ENST00000544293 CA12O43570 354 aa12.6□□□□□ -0.39
C2CD3-220ENST00000544293 BBOX1O75936 387 aa12.6□□□□□ -0.39
C2CD3-220ENST00000544293 HCLS1P14317 486 aaPredicted RBP12.6□□□□□ -0.39
C2CD3-220ENST00000544293 DGKZQ13574 1117 aa12.6□□□□□ -0.39
C2CD3-220ENST00000544293 CDC37L1Q7L3B6 337 aa12.6□□□□□ -0.39
C2CD3-220ENST00000544293 PNISRQ8TF01 805 aaKnown RBP12.6□□□□□ -0.39
C2CD3-220ENST00000544293 UTP14AQ9BVJ6 771 aaKnown RBP12.6□□□□□ -0.39
C2CD3-220ENST00000544293 CNOT7Q9UIV1 285 aaKnown RBP12.6□□□□□ -0.39
C2CD3-220ENST00000544293 ZBTB12Q9Y330 459 aaPredicted RBP12.6□□□□□ -0.39
C2CD3-220ENST00000544293 PARP10Q53GL7 1025 aa12.59□□□□□ -0.39
C2CD3-220ENST00000544293 SAMD7Q7Z3H4 446 aa12.59□□□□□ -0.39
C2CD3-220ENST00000544293 PPP1R42Q7Z4L9 355 aa12.59□□□□□ -0.39
C2CD3-220ENST00000544293 MPNDQ8N594 471 aa12.59□□□□□ -0.39
C2CD3-220ENST00000544293 ZNF408Q9H9D4 720 aa12.59□□□□□ -0.39
C2CD3-220ENST00000544293 KCNQ5Q9NR82 932 aa12.59□□□□□ -0.39
C2CD3-220ENST00000544293 PCDH10Q9P2E7 1040 aa12.59□□□□□ -0.39
C2CD3-220ENST00000544293 DPP8Q6V1X1 898 aaPredicted RBP12.58□□□□□ -0.4
C2CD3-220ENST00000544293 NLRP10Q86W26 655 aa12.58□□□□□ -0.4
C2CD3-220ENST00000544293 U3KPZ7 1027 aaPredicted RBP12.58□□□□□ -0.4
C2CD3-220ENST00000544293 HUNKP57058 714 aa12.57□□□□□ -0.4
C2CD3-220ENST00000544293 NOGQ13253 232 aa12.57□□□□□ -0.4
C2CD3-220ENST00000544293 NFE2L2Q16236 605 aa12.57□□□□□ -0.4
C2CD3-220ENST00000544293 MICALL2Q8IY33 904 aa12.57□□□□□ -0.4
C2CD3-220ENST00000544293 SUPT20HQ8NEM7 779 aa12.57□□□□□ -0.4
C2CD3-220ENST00000544293 ERBB4Q15303 1308 aa12.57□□□□□ -0.4
C2CD3-220ENST00000544293 CDHR2Q9BYE9 1310 aa12.57□□□□□ -0.4
C2CD3-220ENST00000544293 PSMD14O00487 310 aa12.56□□□□□ -0.4
C2CD3-220ENST00000544293 EIF2S2P20042 333 aaKnown RBP12.56□□□□□ -0.4
C2CD3-220ENST00000544293 KIF23Q02241 960 aaPredicted RBP12.56□□□□□ -0.4
C2CD3-220ENST00000544293 GRAPQ13588 217 aa12.56□□□□□ -0.4
C2CD3-220ENST00000544293 TNIP1Q15025 636 aa12.56□□□□□ -0.4
C2CD3-220ENST00000544293 COPS6Q7L5N1 327 aa12.56□□□□□ -0.4
C2CD3-220ENST00000544293 GRAPLQ8TC17 118 aaPredicted RBP12.56□□□□□ -0.4
C2CD3-220ENST00000544293 DPF2Q92785 391 aa12.56□□□□□ -0.4
C2CD3-220ENST00000544293 ZNF428Q96B54 188 aa12.56□□□□□ -0.4
C2CD3-220ENST00000544293 BCL2L13Q9BXK5 485 aa12.56□□□□□ -0.4
C2CD3-220ENST00000544293 RNF186Q9NXI6 227 aa12.56□□□□□ -0.4
C2CD3-220ENST00000544293 POLLQ9UGP5 575 aa12.56□□□□□ -0.4
C2CD3-220ENST00000544293 ADM5C9JUS6 153 aa12.55□□□□□ -0.4
C2CD3-220ENST00000544293 TCIRG1Q13488 830 aa12.55□□□□□ -0.4
C2CD3-220ENST00000544293 RGMBQ6NW40 437 aa12.55□□□□□ -0.4
C2CD3-220ENST00000544293 CELF1Q92879 486 aaKnown RBP12.55□□□□□ -0.4
C2CD3-220ENST00000544293 CFAP44Q96MT7 982 aa12.55□□□□□ -0.4
C2CD3-220ENST00000544293 CSRNP1Q96S65 589 aa12.55□□□□□ -0.4
C2CD3-220ENST00000544293 ASTN2O75129 1339 aaPredicted RBP12.55□□□□□ -0.4
C2CD3-220ENST00000544293 RTL9Q8NET4 1388 aa12.55□□□□□ -0.4
C2CD3-220ENST00000544293 H7C1D1 291 aa12.54□□□□□ -0.4
C2CD3-220ENST00000544293 TBC1D10BQ4KMP7 808 aaPredicted RBP12.54□□□□□ -0.4
C2CD3-220ENST00000544293 XAGE3Q8WTP9 111 aa12.54□□□□□ -0.4
C2CD3-220ENST00000544293 DUOX1Q9NRD9 1551 aa12.53□□□□□ -0.4
C2CD3-220ENST00000544293 SOX10P56693 466 aa12.53□□□□□ -0.4
C2CD3-220ENST00000544293 GPSM2P81274 684 aa12.53□□□□□ -0.4
C2CD3-220ENST00000544293 KRT24Q2M2I5 525 aa12.53□□□□□ -0.4
C2CD3-220ENST00000544293 KRT26Q7Z3Y9 468 aa12.53□□□□□ -0.4
C2CD3-220ENST00000544293 DBNDD1Q9H9R9 158 aa12.53□□□□□ -0.4
C2CD3-220ENST00000544293 GBA2Q9HCG7 927 aaPredicted RBP12.53□□□□□ -0.4
C2CD3-220ENST00000544293 RIMBP2O15034 1052 aa12.52□□□□□ -0.41
C2CD3-220ENST00000544293 TRPA1O75762 1119 aa12.52□□□□□ -0.41
C2CD3-220ENST00000544293 AIMP1Q12904 312 aaKnown RBP12.52□□□□□ -0.41
C2CD3-220ENST00000544293 SF3B3Q15393 1217 aaKnown RBP12.52□□□□□ -0.41
C2CD3-220ENST00000544293 RBM26Q5T8P6 1007 aaKnown RBP12.52□□□□□ -0.41
C2CD3-220ENST00000544293 DDX46Q7L014 1031 aaKnown RBP12.52□□□□□ -0.41
C2CD3-220ENST00000544293 NECTIN2Q92692 538 aa12.52□□□□□ -0.41
C2CD3-220ENST00000544293 TMX4Q9H1E5 349 aaPredicted RBP12.52□□□□□ -0.41
C2CD3-220ENST00000544293 SAGE1Q9NXZ1 904 aa12.52□□□□□ -0.41
C2CD3-220ENST00000544293 TRMT112Q9UI30 125 aaKnown RBP12.52□□□□□ -0.41
C2CD3-220ENST00000544293 TSPYL4Q9UJ04 414 aa12.52□□□□□ -0.41
C2CD3-220ENST00000544293 CASP8AP2Q9UKL3 1982 aa12.51□□□□□ -0.41
C2CD3-220ENST00000544293 SLC10A3P09131 477 aa12.51□□□□□ -0.41
C2CD3-220ENST00000544293 DOK7Q18PE1 504 aa12.51□□□□□ -0.41
C2CD3-220ENST00000544293 WASHC4Q2M389 1173 aa12.51□□□□□ -0.41
C2CD3-220ENST00000544293 CCDC102AQ96A19 550 aa12.51□□□□□ -0.41
C2CD3-220ENST00000544293 ISCA1Q9BUE6 129 aa12.51□□□□□ -0.41
C2CD3-220ENST00000544293 NSFL1CQ9UNZ2 370 aaKnown RBP12.51□□□□□ -0.41
C2CD3-220ENST00000544293 SH3TC1Q8TE82 1336 aa12.51□□□□□ -0.41
C2CD3-220ENST00000544293 COL4A1P02462 1669 aa12.51□□□□□ -0.41
C2CD3-220ENST00000544293 NUP98P52948 1817 aa12.51□□□□□ -0.41
C2CD3-220ENST00000544293 VIL1P09327 827 aaKnown RBP12.5□□□□□ -0.41
C2CD3-220ENST00000544293 ZNF157P51786 506 aaPredicted RBP12.5□□□□□ -0.41
C2CD3-220ENST00000544293 FAM89AQ96GI7 184 aa12.5□□□□□ -0.41
C2CD3-220ENST00000544293 KDM3BQ7LBC6 1761 aa12.49□□□□□ -0.41
C2CD3-220ENST00000544293 ECE2O60344 883 aa12.49□□□□□ -0.41
C2CD3-220ENST00000544293 RIPK4P57078 832 aa12.49□□□□□ -0.41
C2CD3-220ENST00000544293 HSP90AB3PQ58FF7 597 aa12.49□□□□□ -0.41
C2CD3-220ENST00000544293 TMC4Q7Z404 712 aa12.49□□□□□ -0.41
C2CD3-220ENST00000544293 C2orf69Q8N8R5 385 aa12.49□□□□□ -0.41
C2CD3-220ENST00000544293 TBC1D16Q8TBP0 767 aa12.49□□□□□ -0.41
C2CD3-220ENST00000544293 BABAM1Q9NWV8 329 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms