RNA–Protein interactions for RNA: ENST00000544241.6

TCF4-209, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-209ENST00000544241 MPHOSPH8Q99549 860 aa12.05□□□□□ -0.48
TCF4-209ENST00000544241 IL25Q9H293 177 aa12.05□□□□□ -0.48
TCF4-209ENST00000544241 TRIM66O15016 1216 aa12.04□□□□□ -0.48
TCF4-209ENST00000544241 GLRX3O76003 335 aaKnown RBP12.04□□□□□ -0.48
TCF4-209ENST00000544241 APPP05067 770 aa12.04□□□□□ -0.48
TCF4-209ENST00000544241 PSME1Q06323 249 aa12.04□□□□□ -0.48
TCF4-209ENST00000544241 CWC27Q6UX04 472 aaKnown RBP12.04□□□□□ -0.48
TCF4-209ENST00000544241 CCDC91Q7Z6B0 441 aa12.04□□□□□ -0.48
TCF4-209ENST00000544241 FCHSD1Q86WN1 690 aa12.04□□□□□ -0.48
TCF4-209ENST00000544241 MSL3Q8N5Y2 521 aaKnown RBP12.04□□□□□ -0.48
TCF4-209ENST00000544241 ALDH8A1Q9H2A2 487 aaPredicted RBP12.04□□□□□ -0.48
TCF4-209ENST00000544241 TFIP11Q9UBB9 837 aaKnown RBP12.04□□□□□ -0.48
TCF4-209ENST00000544241 PNMA6EA0A0J9YXQ4 647 aa12.04□□□□□ -0.48
TCF4-209ENST00000544241 HIP1O00291 1037 aa12.04□□□□□ -0.48
TCF4-209ENST00000544241 URI1O94763 535 aaPredicted RBP12.04□□□□□ -0.48
TCF4-209ENST00000544241 EVCP57679 992 aa12.04□□□□□ -0.48
TCF4-209ENST00000544241 C11orf57Q6ZUT1 292 aaPredicted RBP12.04□□□□□ -0.48
TCF4-209ENST00000544241 DHX40Q8IX18 779 aaKnown RBP12.04□□□□□ -0.48
TCF4-209ENST00000544241 PI4K2BQ8TCG2 481 aa12.04□□□□□ -0.48
TCF4-209ENST00000544241 SECISBP2LQ93073 1101 aaKnown RBP12.04□□□□□ -0.48
TCF4-209ENST00000544241 BPIFA3Q9BQP9 254 aa12.04□□□□□ -0.48
TCF4-209ENST00000544241 FAM107BQ9H098 131 aa12.04□□□□□ -0.48
TCF4-209ENST00000544241 STAG3Q9UJ98 1225 aa12.04□□□□□ -0.48
TCF4-209ENST00000544241 CHD2O14647 1828 aaKnown RBP12.04□□□□□ -0.48
TCF4-209ENST00000544241 NPATQ14207 1427 aa12.03□□□□□ -0.48
TCF4-209ENST00000544241 CCDC151A5D8V7 595 aa12.03□□□□□ -0.48
TCF4-209ENST00000544241 DCTN1Q14203 1278 aa12.03□□□□□ -0.48
TCF4-209ENST00000544241 BRD3Q15059 726 aa12.03□□□□□ -0.48
TCF4-209ENST00000544241 GORABQ5T7V8 394 aa12.03□□□□□ -0.48
TCF4-209ENST00000544241 PRPF40BQ6NWY9 871 aaKnown RBP12.03□□□□□ -0.48
TCF4-209ENST00000544241 NFATC2IPQ8NCF5 419 aa12.03□□□□□ -0.48
TCF4-209ENST00000544241 RABGGTAQ92696 567 aa12.03□□□□□ -0.48
TCF4-209ENST00000544241 CABP1Q9NZU7 370 aa12.03□□□□□ -0.48
TCF4-209ENST00000544241 MAP3K5Q99683 1374 aa12.03□□□□□ -0.48
TCF4-209ENST00000544241 POTEB2H3BUK9 544 aa12.03□□□□□ -0.48
TCF4-209ENST00000544241 RAPGEF3O95398 923 aa12.03□□□□□ -0.48
TCF4-209ENST00000544241 GPATCH3Q96I76 525 aa12.03□□□□□ -0.48
TCF4-209ENST00000544241 PGBD1Q96JS3 809 aa12.03□□□□□ -0.48
TCF4-209ENST00000544241 HDAC5Q9UQL6 1122 aa12.03□□□□□ -0.48
TCF4-209ENST00000544241 HECW2Q9P2P5 1572 aa12.02□□□□□ -0.48
TCF4-209ENST00000544241 H3BQV1 296 aa12.02□□□□□ -0.49
TCF4-209ENST00000544241 ATP2B1P20020 1258 aa12.02□□□□□ -0.49
TCF4-209ENST00000544241 IFFO2Q5TF58 517 aa12.02□□□□□ -0.49
TCF4-209ENST00000544241 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.02□□□□□ -0.49
TCF4-209ENST00000544241 NECAB1Q8N987 351 aa12.02□□□□□ -0.49
TCF4-209ENST00000544241 SSH3Q8TE77 659 aa12.02□□□□□ -0.49
TCF4-209ENST00000544241 ZNF622Q969S3 477 aaKnown RBP eCLIP12.02□□□□□ -0.49
TCF4-209ENST00000544241 TPCN1Q9ULQ1 816 aa12.02□□□□□ -0.49
TCF4-209ENST00000544241 SPG7Q9UQ90 795 aa12.02□□□□□ -0.49
TCF4-209ENST00000544241 MINK1Q8N4C8 1332 aaPredicted RBP12.02□□□□□ -0.49
TCF4-209ENST00000544241 MAP2P11137 1827 aaKnown RBP12.02□□□□□ -0.49
TCF4-209ENST00000544241 NEO1Q92859 1461 aa12.02□□□□□ -0.49
TCF4-209ENST00000544241 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.02□□□□□ -0.49
TCF4-209ENST00000544241 UBTFL1P0CB47 393 aaPredicted RBP12.02□□□□□ -0.49
TCF4-209ENST00000544241 GNL2Q13823 731 aaKnown RBP12.02□□□□□ -0.49
TCF4-209ENST00000544241 FAM173BQ6P4H8 233 aa12.02□□□□□ -0.49
TCF4-209ENST00000544241 BLOC1S2Q6QNY1 142 aa12.02□□□□□ -0.49
TCF4-209ENST00000544241 SUGP1Q8IWZ8 645 aaKnown RBP12.02□□□□□ -0.49
TCF4-209ENST00000544241 REXO1L1PQ8IX06 675 aa12.02□□□□□ -0.49
TCF4-209ENST00000544241 LCMT1Q9UIC8 334 aa12.02□□□□□ -0.49
TCF4-209ENST00000544241 CFAP65Q6ZU64 1925 aaKnown RBP12.02□□□□□ -0.49
TCF4-209ENST00000544241 F6X3S4 739 aa12.01□□□□□ -0.49
TCF4-209ENST00000544241 ERLIN1O75477 346 aa12.01□□□□□ -0.49
TCF4-209ENST00000544241 CPA1P15085 419 aa12.01□□□□□ -0.49
TCF4-209ENST00000544241 FAM160A1Q05DH4 1040 aa12.01□□□□□ -0.49
TCF4-209ENST00000544241 ST3GAL1Q11201 340 aa12.01□□□□□ -0.49
TCF4-209ENST00000544241 NECTIN1Q15223 517 aa12.01□□□□□ -0.49
TCF4-209ENST00000544241 LARP1Q6PKG0 1096 aaKnown RBP12.01□□□□□ -0.49
TCF4-209ENST00000544241 TMC6Q7Z403 805 aa12.01□□□□□ -0.49
TCF4-209ENST00000544241 NUTM1Q86Y26 1132 aa12.01□□□□□ -0.49
TCF4-209ENST00000544241 AOPEPQ8N6M6 819 aa12.01□□□□□ -0.49
TCF4-209ENST00000544241 RHPN1Q8TCX5 695 aa12.01□□□□□ -0.49
TCF4-209ENST00000544241 GOLGA1Q92805 767 aa12.01□□□□□ -0.49
TCF4-209ENST00000544241 CDK19Q9BWU1 502 aa12.01□□□□□ -0.49
TCF4-209ENST00000544241 CARD6Q9BX69 1037 aa12.01□□□□□ -0.49
TCF4-209ENST00000544241 ACBD3Q9H3P7 528 aa12.01□□□□□ -0.49
TCF4-209ENST00000544241 IL1RAPL2Q9NP60 686 aa12.01□□□□□ -0.49
TCF4-209ENST00000544241 EMILIN1Q9Y6C2 1016 aa12.01□□□□□ -0.49
TCF4-209ENST00000544241 USP42Q9H9J4 1324 aaKnown RBP12.01□□□□□ -0.49
TCF4-209ENST00000544241 PTPRMP28827 1452 aa12.01□□□□□ -0.49
TCF4-209ENST00000544241 CBFA2T2O43439 604 aa12□□□□□ -0.49
TCF4-209ENST00000544241 SURF6O75683 361 aaKnown RBP12□□□□□ -0.49
TCF4-209ENST00000544241 SASH3O75995 380 aa12□□□□□ -0.49
TCF4-209ENST00000544241 SEC31AO94979 1220 aaKnown RBP12□□□□□ -0.49
TCF4-209ENST00000544241 ADCK5Q3MIX3 580 aa12□□□□□ -0.49
TCF4-209ENST00000544241 NBPF11Q86T75 865 aa12□□□□□ -0.49
TCF4-209ENST00000544241 CCAR1Q8IX12 1150 aaKnown RBP12□□□□□ -0.49
TCF4-209ENST00000544241 EFCAB13Q8IY85 973 aa12□□□□□ -0.49
TCF4-209ENST00000544241 HNRNPLLQ8WVV9 542 aaKnown RBP12□□□□□ -0.49
TCF4-209ENST00000544241 CCDC34Q96HJ3 373 aa12□□□□□ -0.49
TCF4-209ENST00000544241 PRAM1Q96QH2 718 aa12□□□□□ -0.49
TCF4-209ENST00000544241 FUT8Q9BYC5 575 aa12□□□□□ -0.49
TCF4-209ENST00000544241 ZCCHC17Q9NP64 241 aaKnown RBP12□□□□□ -0.49
TCF4-209ENST00000544241 STK26Q9P289 416 aa12□□□□□ -0.49
TCF4-209ENST00000544241 PREX1Q8TCU6 1659 aa12□□□□□ -0.49
TCF4-209ENST00000544241 PXDNLA1KZ92 1463 aa12□□□□□ -0.49
TCF4-209ENST00000544241 EDC4Q6P2E9 1401 aaKnown RBP12□□□□□ -0.49
TCF4-209ENST00000544241 LOC102724159A0A0B4J2E5 919 aa12□□□□□ -0.49
TCF4-209ENST00000544241 SOX12O15370 315 aa12□□□□□ -0.49
TCF4-209ENST00000544241 TUBBP07437 444 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms