RNA–Protein interactions for RNA: ENST00000544001.6

ITFG1-204, Transcript of integrin alpha FG-GAP repeat containing 1, humanhuman

TSL 2 BASIC

Gene ITFG1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITFG1-204ENST00000544001 LIMCH1Q9UPQ0 1083 aa16.16■□□□□ 0.18
ITFG1-204ENST00000544001 VPS53Q5VIR6 699 aa16.15■□□□□ 0.18
ITFG1-204ENST00000544001 CCDC191Q8NCU4 936 aa16.15■□□□□ 0.18
ITFG1-204ENST00000544001 CHMP3Q9Y3E7 222 aa16.15■□□□□ 0.18
ITFG1-204ENST00000544001 UBAP1LF5GYI3 381 aa16.15■□□□□ 0.18
ITFG1-204ENST00000544001 CAVIN1Q6NZI2 390 aaKnown RBP16.15■□□□□ 0.18
ITFG1-204ENST00000544001 ATG9AQ7Z3C6 839 aa16.15■□□□□ 0.18
ITFG1-204ENST00000544001 ZNF589Q86UQ0 364 aaPredicted RBP16.15■□□□□ 0.18
ITFG1-204ENST00000544001 LARP6Q9BRS8 491 aaKnown RBP16.15■□□□□ 0.18
ITFG1-204ENST00000544001 PHLPP1O60346 1717 aa16.14■□□□□ 0.17
ITFG1-204ENST00000544001 SLC27A2O14975 620 aa16.14■□□□□ 0.17
ITFG1-204ENST00000544001 PDRG1Q9NUG6 133 aa16.14■□□□□ 0.17
ITFG1-204ENST00000544001 BTG4Q9NY30 223 aa16.14■□□□□ 0.17
ITFG1-204ENST00000544001 CYP46A1Q9Y6A2 500 aa16.14■□□□□ 0.17
ITFG1-204ENST00000544001 WDR33Q9C0J8 1336 aaKnown RBP16.13■□□□□ 0.17
ITFG1-204ENST00000544001 ZKSCAN1P17029 563 aaPredicted RBP16.13■□□□□ 0.17
ITFG1-204ENST00000544001 KCNJ4P48050 445 aa16.13■□□□□ 0.17
ITFG1-204ENST00000544001 ZNF445P59923 1031 aa16.13■□□□□ 0.17
ITFG1-204ENST00000544001 ISCA1Q9BUE6 129 aa16.13■□□□□ 0.17
ITFG1-204ENST00000544001 NDUFB9Q9Y6M9 179 aa16.13■□□□□ 0.17
ITFG1-204ENST00000544001 MYH15Q9Y2K3 1946 aa16.13■□□□□ 0.17
ITFG1-204ENST00000544001 NCLP19338 710 aaKnown RBP16.12■□□□□ 0.17
ITFG1-204ENST00000544001 PIGBQ92521 554 aa16.12■□□□□ 0.17
ITFG1-204ENST00000544001 HAUS7Q99871 368 aa16.12■□□□□ 0.17
ITFG1-204ENST00000544001 MYO5AQ9Y4I1 1855 aaKnown RBP16.12■□□□□ 0.17
ITFG1-204ENST00000544001 PALLDQ8WX93 1383 aa16.12■□□□□ 0.17
ITFG1-204ENST00000544001 ZSCAN23Q3MJ62 389 aa16.12■□□□□ 0.17
ITFG1-204ENST00000544001 DNAJC10Q8IXB1 793 aa16.12■□□□□ 0.17
ITFG1-204ENST00000544001 DNAJC2Q99543 621 aaKnown RBP16.12■□□□□ 0.17
ITFG1-204ENST00000544001 ASAP1Q9ULH1 1129 aa16.12■□□□□ 0.17
ITFG1-204ENST00000544001 AKAP11Q9UKA4 1901 aa16.12■□□□□ 0.17
ITFG1-204ENST00000544001 ST3GAL1Q11201 340 aa16.11■□□□□ 0.17
ITFG1-204ENST00000544001 COL9A3Q14050 684 aaPredicted RBP16.11■□□□□ 0.17
ITFG1-204ENST00000544001 VSIG10Q8N0Z9 540 aa16.11■□□□□ 0.17
ITFG1-204ENST00000544001 FAM43AQ8N2R8 423 aa16.11■□□□□ 0.17
ITFG1-204ENST00000544001 GPR108Q9NPR9 543 aa16.11■□□□□ 0.17
ITFG1-204ENST00000544001 RBM27Q9P2N5 1060 aaKnown RBP16.11■□□□□ 0.17
ITFG1-204ENST00000544001 NSFL1CQ9UNZ2 370 aaKnown RBP16.11■□□□□ 0.17
ITFG1-204ENST00000544001 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.11■□□□□ 0.17
ITFG1-204ENST00000544001 TAF6LQ9Y6J9 622 aa16.11■□□□□ 0.17
ITFG1-204ENST00000544001 BCL9O00512 1426 aa16.11■□□□□ 0.17
ITFG1-204ENST00000544001 TAF5LO75529 589 aa16.1■□□□□ 0.17
ITFG1-204ENST00000544001 IL15P40933 162 aaPredicted RBP16.1■□□□□ 0.17
ITFG1-204ENST00000544001 CCDC83Q8IWF9 413 aa16.1■□□□□ 0.17
ITFG1-204ENST00000544001 ATG3Q9NT62 314 aa16.1■□□□□ 0.17
ITFG1-204ENST00000544001 NWD2Q9ULI1 1742 aa16.1■□□□□ 0.17
ITFG1-204ENST00000544001 EYA2O00167 538 aa16.1■□□□□ 0.17
ITFG1-204ENST00000544001 CHGBP05060 677 aa16.1■□□□□ 0.17
ITFG1-204ENST00000544001 TCIRG1Q13488 830 aa16.1■□□□□ 0.17
ITFG1-204ENST00000544001 LRRC24Q50LG9 513 aa16.1■□□□□ 0.17
ITFG1-204ENST00000544001 RNF20Q5VTR2 975 aa16.1■□□□□ 0.17
ITFG1-204ENST00000544001 DDX46Q7L014 1031 aaKnown RBP16.1■□□□□ 0.17
ITFG1-204ENST00000544001 ZNF594Q96JF6 807 aaPredicted RBP16.1■□□□□ 0.17
ITFG1-204ENST00000544001 ZSCAN31Q96LW9 406 aaPredicted RBP16.1■□□□□ 0.17
ITFG1-204ENST00000544001 SH2B1Q9NRF2 756 aaPredicted RBP16.1■□□□□ 0.17
ITFG1-204ENST00000544001 SMC3Q9UQE7 1217 aa16.1■□□□□ 0.17
ITFG1-204ENST00000544001 ARAP2Q8WZ64 1704 aa16.1■□□□□ 0.17
ITFG1-204ENST00000544001 DDX60Q8IY21 1712 aaKnown RBP16.09■□□□□ 0.17
ITFG1-204ENST00000544001 MBD3O95983 291 aa16.09■□□□□ 0.17
ITFG1-204ENST00000544001 USPL1Q5W0Q7 1092 aa16.09■□□□□ 0.17
ITFG1-204ENST00000544001 HMG20BQ9P0W2 317 aa16.09■□□□□ 0.17
ITFG1-204ENST00000544001 TMEM63CQ9P1W3 806 aa16.09■□□□□ 0.17
ITFG1-204ENST00000544001 ZNF330Q9Y3S2 320 aaPredicted RBP16.09■□□□□ 0.17
ITFG1-204ENST00000544001 RREB1Q92766 1687 aa16.09■□□□□ 0.17
ITFG1-204ENST00000544001 CASZ1Q86V15 1759 aa16.08■□□□□ 0.17
ITFG1-204ENST00000544001 CIAO1O76071 339 aa16.08■□□□□ 0.17
ITFG1-204ENST00000544001 ZSCAN22P10073 491 aaPredicted RBP16.08■□□□□ 0.17
ITFG1-204ENST00000544001 SYT1P21579 422 aa16.08■□□□□ 0.17
ITFG1-204ENST00000544001 PSMA5P28066 241 aa16.08■□□□□ 0.17
ITFG1-204ENST00000544001 ME3Q16798 604 aa16.08■□□□□ 0.17
ITFG1-204ENST00000544001 KBTBD3Q8NAB2 608 aa16.08■□□□□ 0.17
ITFG1-204ENST00000544001 TEX13AQ9BXU3 409 aaPredicted RBP16.08■□□□□ 0.17
ITFG1-204ENST00000544001 SH3TC1Q8TE82 1336 aa16.08■□□□□ 0.16
ITFG1-204ENST00000544001 CICQ96RK0 1608 aaPredicted RBP16.08■□□□□ 0.16
ITFG1-204ENST00000544001 STX6O43752 255 aa16.08■□□□□ 0.16
ITFG1-204ENST00000544001 TRIM28Q13263 835 aaKnown RBP16.08■□□□□ 0.16
ITFG1-204ENST00000544001 TSGA10IPQ3SY00 556 aa16.08■□□□□ 0.16
ITFG1-204ENST00000544001 KIF6Q6ZMV9 814 aa16.08■□□□□ 0.16
ITFG1-204ENST00000544001 CCDC129Q6ZRS4 1044 aa16.08■□□□□ 0.16
ITFG1-204ENST00000544001 NEUROD6Q96NK8 337 aa16.08■□□□□ 0.16
ITFG1-204ENST00000544001 SEC62Q99442 399 aaKnown RBP16.08■□□□□ 0.16
ITFG1-204ENST00000544001 CCDC9Q9Y3X0 531 aaKnown RBP16.08■□□□□ 0.16
ITFG1-204ENST00000544001 LAMB2P55268 1798 aa16.07■□□□□ 0.16
ITFG1-204ENST00000544001 RPS6KB1P23443 525 aa16.07■□□□□ 0.16
ITFG1-204ENST00000544001 GJB2P29033 226 aa16.07■□□□□ 0.16
ITFG1-204ENST00000544001 FOXD4L6Q3SYB3 417 aaPredicted RBP16.07■□□□□ 0.16
ITFG1-204ENST00000544001 BLOC1S2Q6QNY1 142 aa16.07■□□□□ 0.16
ITFG1-204ENST00000544001 FOXD4L3Q6VB84 417 aaPredicted RBP16.07■□□□□ 0.16
ITFG1-204ENST00000544001 PUS3Q9BZE2 481 aaKnown RBP16.07■□□□□ 0.16
ITFG1-204ENST00000544001 TPCN1Q9ULQ1 816 aa16.07■□□□□ 0.16
ITFG1-204ENST00000544001 RIC1Q4ADV7 1423 aa16.06■□□□□ 0.16
ITFG1-204ENST00000544001 PCCAP05165 728 aaPredicted RBP16.06■□□□□ 0.16
ITFG1-204ENST00000544001 TIMM10P62072 90 aa16.06■□□□□ 0.16
ITFG1-204ENST00000544001 ALDH8A1Q9H2A2 487 aaPredicted RBP16.06■□□□□ 0.16
ITFG1-204ENST00000544001 PAG1Q9NWQ8 432 aa16.06■□□□□ 0.16
ITFG1-204ENST00000544001 LRP5O75197 1615 aa16.06■□□□□ 0.16
ITFG1-204ENST00000544001 MAP3K15Q6ZN16 1313 aa16.06■□□□□ 0.16
ITFG1-204ENST00000544001 A0A1B0GUL7 405 aa16.05■□□□□ 0.16
ITFG1-204ENST00000544001 GOLIM4O00461 696 aa16.05■□□□□ 0.16
ITFG1-204ENST00000544001 STARD3NLO95772 234 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms