RNA–Protein interactions for RNA: ENST00000543511.1

DDX11-225, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-225ENST00000543511 POLD1P28340 1107 aa13.48□□□□□ -0.25
DDX11-225ENST00000543511 IER5LQ5T953 404 aa13.48□□□□□ -0.25
DDX11-225ENST00000543511 KSR2Q6VAB6 950 aa13.48□□□□□ -0.25
DDX11-225ENST00000543511 BICDL1Q6ZP65 573 aa13.48□□□□□ -0.25
DDX11-225ENST00000543511 PLPP6Q8IY26 295 aa13.48□□□□□ -0.25
DDX11-225ENST00000543511 ZNF34Q8IZ26 560 aa13.48□□□□□ -0.25
DDX11-225ENST00000543511 SMC4Q9NTJ3 1288 aa13.48□□□□□ -0.25
DDX11-225ENST00000543511 IBTKQ9P2D0 1353 aaPredicted RBP13.47□□□□□ -0.25
DDX11-225ENST00000543511 TNRC6CQ9HCJ0 1690 aaKnown RBP13.47□□□□□ -0.25
DDX11-225ENST00000543511 PI4KAP2A4QPH2 592 aa13.47□□□□□ -0.25
DDX11-225ENST00000543511 C2orf72A6NCS6 295 aa13.47□□□□□ -0.25
DDX11-225ENST00000543511 TCIRG1Q13488 830 aa13.47□□□□□ -0.25
DDX11-225ENST00000543511 PI4KAP1Q8N8J0 262 aa13.47□□□□□ -0.25
DDX11-225ENST00000543511 NIP7Q9Y221 180 aaKnown RBP eCLIP13.47□□□□□ -0.25
DDX11-225ENST00000543511 DLEC1Q9Y238 1755 aa13.47□□□□□ -0.25
DDX11-225ENST00000543511 COL11A2P13942 1736 aaPredicted RBP13.47□□□□□ -0.25
DDX11-225ENST00000543511 DDX60Q8IY21 1712 aaKnown RBP13.47□□□□□ -0.25
DDX11-225ENST00000543511 DDX58O95786 925 aaKnown RBP13.46□□□□□ -0.25
DDX11-225ENST00000543511 GPTP24298 496 aa13.46□□□□□ -0.25
DDX11-225ENST00000543511 FKBP5Q13451 457 aaPredicted RBP13.46□□□□□ -0.25
DDX11-225ENST00000543511 HSP90AB3PQ58FF7 597 aa13.46□□□□□ -0.25
DDX11-225ENST00000543511 RIC3Q7Z5B4 369 aa13.46□□□□□ -0.25
DDX11-225ENST00000543511 ISCA1Q9BUE6 129 aa13.46□□□□□ -0.25
DDX11-225ENST00000543511 METTL22Q9BUU2 404 aaPredicted RBP13.46□□□□□ -0.25
DDX11-225ENST00000543511 MAP3K2Q9Y2U5 619 aa13.46□□□□□ -0.25
DDX11-225ENST00000543511 PARP3Q9Y6F1 533 aa13.46□□□□□ -0.25
DDX11-225ENST00000543511 PXDNLA1KZ92 1463 aa13.46□□□□□ -0.25
DDX11-225ENST00000543511 BRCA1P38398 1863 aaKnown RBP13.46□□□□□ -0.26
DDX11-225ENST00000543511 BCAR3O75815 825 aa13.45□□□□□ -0.26
DDX11-225ENST00000543511 SERPINB2P05120 415 aa13.45□□□□□ -0.26
DDX11-225ENST00000543511 SETDB2Q96T68 719 aa13.45□□□□□ -0.26
DDX11-225ENST00000543511 PTPRCP08575 1304 aa13.44□□□□□ -0.26
DDX11-225ENST00000543511 KIF16BQ96L93 1317 aa13.44□□□□□ -0.26
DDX11-225ENST00000543511 F6X3S4 739 aa13.44□□□□□ -0.26
DDX11-225ENST00000543511 SUSD4Q5VX71 490 aa13.44□□□□□ -0.26
DDX11-225ENST00000543511 NLRP10Q86W26 655 aa13.44□□□□□ -0.26
DDX11-225ENST00000543511 DNAAF4Q8WXU2 420 aa13.44□□□□□ -0.26
DDX11-225ENST00000543511 MYD88Q99836 296 aa13.44□□□□□ -0.26
DDX11-225ENST00000543511 MYH3P11055 1940 aa13.44□□□□□ -0.26
DDX11-225ENST00000543511 ABCC12Q96J65 1359 aa13.44□□□□□ -0.26
DDX11-225ENST00000543511 ATP5J2-PTCD1G3V325 749 aa13.43□□□□□ -0.26
DDX11-225ENST00000543511 NTSR2O95665 410 aa13.43□□□□□ -0.26
DDX11-225ENST00000543511 IGKV5-2P06315 115 aa13.43□□□□□ -0.26
DDX11-225ENST00000543511 TRIM28Q13263 835 aaKnown RBP13.43□□□□□ -0.26
DDX11-225ENST00000543511 RIC1Q4ADV7 1423 aa13.43□□□□□ -0.26
DDX11-225ENST00000543511 PARP10Q53GL7 1025 aa13.43□□□□□ -0.26
DDX11-225ENST00000543511 PRR5LQ6MZQ0 368 aa13.43□□□□□ -0.26
DDX11-225ENST00000543511 KRI1Q8N9T8 703 aaKnown RBP13.43□□□□□ -0.26
DDX11-225ENST00000543511 NOB1Q9ULX3 412 aaKnown RBP13.43□□□□□ -0.26
DDX11-225ENST00000543511 G3V3G9 751 aa13.42□□□□□ -0.26
DDX11-225ENST00000543511 CNBD1Q8NA66 436 aa13.42□□□□□ -0.26
DDX11-225ENST00000543511 FAM177BA6PVY3 158 aa13.41□□□□□ -0.26
DDX11-225ENST00000543511 NEURL1BA8MQ27 555 aa13.41□□□□□ -0.26
DDX11-225ENST00000543511 CWF19L2Q2TBE0 894 aaKnown RBP13.41□□□□□ -0.26
DDX11-225ENST00000543511 BEND3Q5T5X7 828 aa13.41□□□□□ -0.26
DDX11-225ENST00000543511 NBPF5PQ86XG9 351 aaPredicted RBP13.41□□□□□ -0.26
DDX11-225ENST00000543511 RCAN3Q9UKA8 241 aa13.41□□□□□ -0.26
DDX11-225ENST00000543511 TNNQ9UQP3 1299 aa13.41□□□□□ -0.26
DDX11-225ENST00000543511 CACNA1SQ13698 1873 aa13.41□□□□□ -0.26
DDX11-225ENST00000543511 PPP1R42Q7Z4L9 355 aa13.4□□□□□ -0.26
DDX11-225ENST00000543511 NUTM1Q86Y26 1132 aa13.4□□□□□ -0.26
DDX11-225ENST00000543511 CCDC24Q8N4L8 307 aa13.4□□□□□ -0.26
DDX11-225ENST00000543511 CCDC191Q8NCU4 936 aa13.4□□□□□ -0.26
DDX11-225ENST00000543511 LINS1Q8NG48 757 aa13.4□□□□□ -0.26
DDX11-225ENST00000543511 ARHGAP45Q92619 1136 aa13.4□□□□□ -0.26
DDX11-225ENST00000543511 UTP14AQ9BVJ6 771 aaKnown RBP13.4□□□□□ -0.26
DDX11-225ENST00000543511 FHDC1Q9C0D6 1143 aaPredicted RBP13.4□□□□□ -0.26
DDX11-225ENST00000543511 NYXQ9GZU5 481 aa13.4□□□□□ -0.26
DDX11-225ENST00000543511 PPP1R1BQ9UD71 204 aaPredicted RBP13.4□□□□□ -0.26
DDX11-225ENST00000543511 CD2APQ9Y5K6 639 aa13.4□□□□□ -0.26
DDX11-225ENST00000543511 ABCC4O15439 1325 aa13.39□□□□□ -0.27
DDX11-225ENST00000543511 RNF123Q5XPI4 1314 aa13.39□□□□□ -0.27
DDX11-225ENST00000543511 TRIM27P14373 513 aa13.39□□□□□ -0.27
DDX11-225ENST00000543511 PLCG2P16885 1265 aa13.39□□□□□ -0.27
DDX11-225ENST00000543511 NEXNQ0ZGT2 675 aa13.39□□□□□ -0.27
DDX11-225ENST00000543511 ERFEQ4G0M1 354 aa13.39□□□□□ -0.27
DDX11-225ENST00000543511 TPTE2Q6XPS3 522 aa13.39□□□□□ -0.27
DDX11-225ENST00000543511 SYNE4Q8N205 404 aa13.39□□□□□ -0.27
DDX11-225ENST00000543511 API5Q9BZZ5 524 aaKnown RBP13.39□□□□□ -0.27
DDX11-225ENST00000543511 CWC25Q9NXE8 425 aaPredicted RBP13.39□□□□□ -0.27
DDX11-225ENST00000543511 ST5P78524 1137 aa13.38□□□□□ -0.27
DDX11-225ENST00000543511 MAP3K9P80192 1104 aa13.38□□□□□ -0.27
DDX11-225ENST00000543511 SLC4A10Q6U841 1118 aa13.38□□□□□ -0.27
DDX11-225ENST00000543511 ATF7IPQ6VMQ6 1270 aa13.38□□□□□ -0.27
DDX11-225ENST00000543511 NLGN2Q8NFZ4 835 aa13.38□□□□□ -0.27
DDX11-225ENST00000543511 TRMT112Q9UI30 125 aaKnown RBP13.38□□□□□ -0.27
DDX11-225ENST00000543511 ARFGEF1Q9Y6D6 1849 aa13.38□□□□□ -0.27
DDX11-225ENST00000543511 TAF1P21675 1872 aa13.38□□□□□ -0.27
DDX11-225ENST00000543511 SH3TC1Q8TE82 1336 aa13.38□□□□□ -0.27
DDX11-225ENST00000543511 ALDH1L1O75891 902 aa13.37□□□□□ -0.27
DDX11-225ENST00000543511 PCCAP05165 728 aaPredicted RBP13.37□□□□□ -0.27
DDX11-225ENST00000543511 CASP7P55210 303 aa13.37□□□□□ -0.27
DDX11-225ENST00000543511 GCKRQ14397 625 aa13.37□□□□□ -0.27
DDX11-225ENST00000543511 ZKSCAN2Q63HK3 967 aa13.37□□□□□ -0.27
DDX11-225ENST00000543511 ZBTB38Q8NAP3 1195 aaPredicted RBP13.37□□□□□ -0.27
DDX11-225ENST00000543511 FRAT1Q92837 279 aaPredicted RBP13.37□□□□□ -0.27
DDX11-225ENST00000543511 L3MBTL3Q96JM7 780 aaPredicted RBP13.37□□□□□ -0.27
DDX11-225ENST00000543511 SYT17Q9BSW7 474 aa13.37□□□□□ -0.27
DDX11-225ENST00000543511 BRIP1Q9BX63 1249 aa13.37□□□□□ -0.27
DDX11-225ENST00000543511 SRCIN1Q9C0H9 1055 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms