RNA–Protein interactions for RNA: ENST00000543341.6

GTF2H3-212, Transcript of general transcription factor IIH subunit 3, human

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2H3, Length 3,329 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GTF2H3-212	ENST00000543341	PIP4K2A	P48426	406 aa	Predicted RBP	9.11	□□□□□ -0.95
GTF2H3-212	ENST00000543341	EN1	Q05925	392 aa	Predicted RBP	9.11	□□□□□ -0.95
GTF2H3-212	ENST00000543341	TBC1D9B	Q66K14	1250 aa		9.11	□□□□□ -0.95
GTF2H3-212	ENST00000543341	KCNQ4	P56696	695 aa		9.1	□□□□□ -0.95
GTF2H3-212	ENST00000543341	SLC16A10	Q8TF71	515 aa		9.1	□□□□□ -0.95
GTF2H3-212	ENST00000543341	SLX4	Q8IY92	1834 aa		9.1	□□□□□ -0.95
GTF2H3-212	ENST00000543341	GOLGA6L3	A6NEY3	463 aa		9.1	□□□□□ -0.95
GTF2H3-212	ENST00000543341	GNPAT	O15228	680 aa		9.1	□□□□□ -0.95
GTF2H3-212	ENST00000543341	DDR1	Q08345	913 aa		9.1	□□□□□ -0.95
GTF2H3-212	ENST00000543341	SF3B3	Q15393	1217 aa	Known RBP	9.1	□□□□□ -0.95
GTF2H3-212	ENST00000543341	CWF19L2	Q2TBE0	894 aa	Known RBP	9.1	□□□□□ -0.95
GTF2H3-212	ENST00000543341	KIF6	Q6ZMV9	814 aa		9.1	□□□□□ -0.95
GTF2H3-212	ENST00000543341	RPAP2	Q8IXW5	612 aa	Predicted RBP	9.1	□□□□□ -0.95
GTF2H3-212	ENST00000543341	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	9.1	□□□□□ -0.95
GTF2H3-212	ENST00000543341	HSP90AA1	P07900	732 aa	Known RBP	9.1	□□□□□ -0.95
GTF2H3-212	ENST00000543341	GNAI3	P08754	354 aa		9.1	□□□□□ -0.95
GTF2H3-212	ENST00000543341	ATP8B2	P98198	1209 aa		9.1	□□□□□ -0.95
GTF2H3-212	ENST00000543341	SUSD4	Q5VX71	490 aa		9.1	□□□□□ -0.95
GTF2H3-212	ENST00000543341	TRIM44	Q96DX7	344 aa	Predicted RBP	9.1	□□□□□ -0.95
GTF2H3-212	ENST00000543341	CWC25	Q9NXE8	425 aa	Predicted RBP	9.1	□□□□□ -0.95
GTF2H3-212	ENST00000543341	FBXO3	Q9UK99	471 aa		9.1	□□□□□ -0.95
GTF2H3-212	ENST00000543341	SBF1	O95248	1867 aa		9.1	□□□□□ -0.95
GTF2H3-212	ENST00000543341	EPHA10	Q5JZY3	1008 aa		9.09	□□□□□ -0.95
GTF2H3-212	ENST00000543341	TRAPPC3L	Q5T215	181 aa		9.09	□□□□□ -0.95
GTF2H3-212	ENST00000543341	NECTIN2	Q92692	538 aa		9.09	□□□□□ -0.95
GTF2H3-212	ENST00000543341	SUCLG2	Q96I99	432 aa		9.09	□□□□□ -0.95
GTF2H3-212	ENST00000543341	ZNF609	O15014	1411 aa		9.09	□□□□□ -0.95
GTF2H3-212	ENST00000543341	CDK5RAP2	Q96SN8	1893 aa		9.08	□□□□□ -0.96
GTF2H3-212	ENST00000543341	ECM29	Q5VYK3	1845 aa		9.08	□□□□□ -0.96
GTF2H3-212	ENST00000543341	HSP90AA2P	Q14568	343 aa	Predicted RBP	9.08	□□□□□ -0.96
GTF2H3-212	ENST00000543341	USPL1	Q5W0Q7	1092 aa		9.08	□□□□□ -0.96
GTF2H3-212	ENST00000543341	HOMEZ	Q8IX15	550 aa		9.08	□□□□□ -0.96
GTF2H3-212	ENST00000543341	MYD88	Q99836	296 aa		9.08	□□□□□ -0.96
GTF2H3-212	ENST00000543341	HOXA10	P31260	410 aa	Predicted RBP	9.08	□□□□□ -0.96
GTF2H3-212	ENST00000543341	NFIX	Q14938	502 aa		9.08	□□□□□ -0.96
GTF2H3-212	ENST00000543341	DCTPP1	Q9H773	170 aa		9.08	□□□□□ -0.96
GTF2H3-212	ENST00000543341	ZNF652	Q9Y2D9	606 aa		9.08	□□□□□ -0.96
GTF2H3-212	ENST00000543341	TIAM2	Q8IVF5	1701 aa		9.08	□□□□□ -0.96
GTF2H3-212	ENST00000543341	VGLL2	Q8N8G2	317 aa		9.08	□□□□□ -0.96
GTF2H3-212	ENST00000543341	COPRS	Q9NQ92	184 aa		9.08	□□□□□ -0.96
GTF2H3-212	ENST00000543341	SRP68	Q9UHB9	627 aa	Known RBP	9.08	□□□□□ -0.96
GTF2H3-212	ENST00000543341		A0A0G2JS52	829 aa		9.07	□□□□□ -0.96
GTF2H3-212	ENST00000543341	CIAO1	O76071	339 aa		9.07	□□□□□ -0.96
GTF2H3-212	ENST00000543341	SEC24B	O95487	1268 aa		9.07	□□□□□ -0.96
GTF2H3-212	ENST00000543341	PTGER2	P43116	358 aa		9.07	□□□□□ -0.96
GTF2H3-212	ENST00000543341	RIC3	Q7Z5B4	369 aa		9.07	□□□□□ -0.96
GTF2H3-212	ENST00000543341	LAMA4	Q16363	1823 aa		9.07	□□□□□ -0.96
GTF2H3-212	ENST00000543341	GNAI2	P04899	355 aa		9.07	□□□□□ -0.96
GTF2H3-212	ENST00000543341	DEFB132	Q7Z7B7	95 aa		9.07	□□□□□ -0.96
GTF2H3-212	ENST00000543341	ZBTB3	Q9H5J0	574 aa		9.06	□□□□□ -0.96
GTF2H3-212	ENST00000543341	MYO5A	Q9Y4I1	1855 aa	Known RBP	9.06	□□□□□ -0.96
GTF2H3-212	ENST00000543341	TTLL11	Q8NHH1	800 aa		9.06	□□□□□ -0.96
GTF2H3-212	ENST00000543341	PKNOX2	Q96KN3	472 aa		9.06	□□□□□ -0.96
GTF2H3-212	ENST00000543341	RWDD1	Q9H446	243 aa	Predicted RBP	9.06	□□□□□ -0.96
GTF2H3-212	ENST00000543341	LAMB1	P07942	1786 aa		9.06	□□□□□ -0.96
GTF2H3-212	ENST00000543341	PNMA6E	A0A0J9YXQ4	647 aa		9.06	□□□□□ -0.96
GTF2H3-212	ENST00000543341	ITPRIP	Q8IWB1	547 aa		9.06	□□□□□ -0.96
GTF2H3-212	ENST00000543341	NYX	Q9GZU5	481 aa		9.06	□□□□□ -0.96
GTF2H3-212	ENST00000543341	BICC1	Q9H694	974 aa	Known RBP	9.06	□□□□□ -0.96
GTF2H3-212	ENST00000543341	PDZRN3	Q9UPQ7	1066 aa		9.06	□□□□□ -0.96
GTF2H3-212	ENST00000543341	TBC1D2B	Q9UPU7	963 aa		9.06	□□□□□ -0.96
GTF2H3-212	ENST00000543341	CTSW	P56202	376 aa		9.05	□□□□□ -0.96
GTF2H3-212	ENST00000543341	PTPN12	Q05209	780 aa	Known RBP	9.05	□□□□□ -0.96
GTF2H3-212	ENST00000543341	ATG9A	Q7Z3C6	839 aa		9.05	□□□□□ -0.96
GTF2H3-212	ENST00000543341	NLGN1	Q8N2Q7	840 aa		9.05	□□□□□ -0.96
GTF2H3-212	ENST00000543341	ANP32B	Q92688	251 aa	Known RBP	9.05	□□□□□ -0.96
GTF2H3-212	ENST00000543341	PDE8A	O60658	829 aa		9.05	□□□□□ -0.96
GTF2H3-212	ENST00000543341	NEXN	Q0ZGT2	675 aa		9.05	□□□□□ -0.96
GTF2H3-212	ENST00000543341	PRR5L	Q6MZQ0	368 aa		9.05	□□□□□ -0.96
GTF2H3-212	ENST00000543341	MFAP1	P55081	439 aa	Known RBP	9.05	□□□□□ -0.96
GTF2H3-212	ENST00000543341	NUCB1	Q02818	461 aa		9.05	□□□□□ -0.96
GTF2H3-212	ENST00000543341	C3orf67	Q6ZVT6	689 aa		9.05	□□□□□ -0.96
GTF2H3-212	ENST00000543341	SMIM5	Q71RC9	77 aa		9.05	□□□□□ -0.96
GTF2H3-212	ENST00000543341	UTP14A	Q9BVJ6	771 aa	Known RBP	9.05	□□□□□ -0.96
GTF2H3-212	ENST00000543341	LRRFIP2	Q9Y608	721 aa	Known RBP	9.05	□□□□□ -0.96
GTF2H3-212	ENST00000543341	SH3TC1	Q8TE82	1336 aa		9.04	□□□□□ -0.96
GTF2H3-212	ENST00000543341	PPP1R42	Q7Z4L9	355 aa		9.04	□□□□□ -0.96
GTF2H3-212	ENST00000543341	GCC1	Q96CN9	775 aa		9.04	□□□□□ -0.96
GTF2H3-212	ENST00000543341	GPR108	Q9NPR9	543 aa		9.04	□□□□□ -0.96
GTF2H3-212	ENST00000543341	HDAC5	Q9UQL6	1122 aa		9.04	□□□□□ -0.96
GTF2H3-212	ENST00000543341	AIMP1	Q12904	312 aa	Known RBP	9.04	□□□□□ -0.96
GTF2H3-212	ENST00000543341	OSBPL3	Q9H4L5	887 aa		9.04	□□□□□ -0.96
GTF2H3-212	ENST00000543341	STK32B	Q9NY57	414 aa		9.04	□□□□□ -0.96
GTF2H3-212	ENST00000543341	PAPPA2	Q9BXP8	1791 aa		9.04	□□□□□ -0.96
GTF2H3-212	ENST00000543341	CCDC88A	Q3V6T2	1871 aa		9.04	□□□□□ -0.96
GTF2H3-212	ENST00000543341	KCNA3	P22001	575 aa		9.03	□□□□□ -0.96
GTF2H3-212	ENST00000543341	C15orf52	Q6ZUT6	534 aa	Known RBP	9.03	□□□□□ -0.96
GTF2H3-212	ENST00000543341	CHD4	Q14839	1912 aa		9.03	□□□□□ -0.96
GTF2H3-212	ENST00000543341	COL4A5	P29400	1685 aa		9.03	□□□□□ -0.96
GTF2H3-212	ENST00000543341	UBTFL1	P0CB47	393 aa	Predicted RBP	9.03	□□□□□ -0.96
GTF2H3-212	ENST00000543341	RFC4	P35249	363 aa		9.03	□□□□□ -0.96
GTF2H3-212	ENST00000543341	ERFE	Q4G0M1	354 aa		9.03	□□□□□ -0.96
GTF2H3-212	ENST00000543341	RIPOR2	Q9Y4F9	1068 aa		9.03	□□□□□ -0.96
GTF2H3-212	ENST00000543341	ATP5J2-PTCD1	G3V325	749 aa		9.03	□□□□□ -0.96
GTF2H3-212	ENST00000543341	C7orf43	Q8WVR3	580 aa		9.03	□□□□□ -0.96
GTF2H3-212	ENST00000543341	PDGFD	Q9GZP0	370 aa	Predicted RBP	9.03	□□□□□ -0.96
GTF2H3-212	ENST00000543341	AOX1	Q06278	1338 aa		9.03	□□□□□ -0.96
GTF2H3-212	ENST00000543341	FGFR2	P21802	821 aa		9.02	□□□□□ -0.97
GTF2H3-212	ENST00000543341	NIP7	Q9Y221	180 aa	Known RBP eCLIP	9.02	□□□□□ -0.97
GTF2H3-212	ENST00000543341	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	9.02	□□□□□ -0.97

Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms