RNA–Protein interactions for RNA: ENST00000542947.1

SLC6A13-210, Transcript of solute carrier family 6 member 13, humanhuman

TSL 3

Gene SLC6A13, Length 490 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13-210ENST00000542947 LRRFIP2Q9Y608 721 aaKnown RBP23.14■■□□□ 1.29
SLC6A13-210ENST00000542947 TTLL11Q8NHH1 800 aa23.13■■□□□ 1.29
SLC6A13-210ENST00000542947 KAZALD1Q96I82 304 aa23.13■■□□□ 1.29
SLC6A13-210ENST00000542947 BICC1Q9H694 974 aaKnown RBP23.13■■□□□ 1.29
SLC6A13-210ENST00000542947 RTL9Q8NET4 1388 aa23.13■■□□□ 1.29
SLC6A13-210ENST00000542947 CSF1RP07333 972 aa23.12■■□□□ 1.29
SLC6A13-210ENST00000542947 DPEP1P16444 411 aa23.12■■□□□ 1.29
SLC6A13-210ENST00000542947 CHRNA5P30532 468 aa23.12■■□□□ 1.29
SLC6A13-210ENST00000542947 HOXA10P31260 410 aaPredicted RBP23.12■■□□□ 1.29
SLC6A13-210ENST00000542947 RABL6Q3YEC7 729 aaPredicted RBP23.12■■□□□ 1.29
SLC6A13-210ENST00000542947 STYK1Q6J9G0 422 aa23.12■■□□□ 1.29
SLC6A13-210ENST00000542947 RBM17Q96I25 401 aaKnown RBP23.12■■□□□ 1.29
SLC6A13-210ENST00000542947 CRBNQ96SW2 442 aa23.12■■□□□ 1.29
SLC6A13-210ENST00000542947 SYT17Q9BSW7 474 aa23.12■■□□□ 1.29
SLC6A13-210ENST00000542947 ZBTB40Q9NUA8 1239 aa23.12■■□□□ 1.29
SLC6A13-210ENST00000542947 EPHA10Q5JZY3 1008 aa23.11■■□□□ 1.29
SLC6A13-210ENST00000542947 LMBR1LQ6UX01 489 aa23.11■■□□□ 1.29
SLC6A13-210ENST00000542947 DDX46Q7L014 1031 aaKnown RBP23.11■■□□□ 1.29
SLC6A13-210ENST00000542947 A0A0G2JLW4 131 aa23.1■■□□□ 1.29
SLC6A13-210ENST00000542947 ALDH1B1P30837 517 aa23.1■■□□□ 1.29
SLC6A13-210ENST00000542947 ANKRD44Q8N8A2 993 aa23.1■■□□□ 1.29
SLC6A13-210ENST00000542947 ZNF622Q969S3 477 aaKnown RBP eCLIP23.1■■□□□ 1.29
SLC6A13-210ENST00000542947 CRAMP1Q96RY5 1269 aa23.1■■□□□ 1.29
SLC6A13-210ENST00000542947 BRCA1P38398 1863 aaKnown RBP23.1■■□□□ 1.29
SLC6A13-210ENST00000542947 AAMPQ13685 434 aa23.09■■□□□ 1.29
SLC6A13-210ENST00000542947 NLGN2Q8NFZ4 835 aa23.09■■□□□ 1.29
SLC6A13-210ENST00000542947 CNKSR1Q969H4 720 aa23.09■■□□□ 1.29
SLC6A13-210ENST00000542947 GREM2Q9H772 168 aa23.09■■□□□ 1.29
SLC6A13-210ENST00000542947 CHMP3Q9Y3E7 222 aa23.09■■□□□ 1.29
SLC6A13-210ENST00000542947 SRCAPQ6ZRS2 3230 aa23.08■■□□□ 1.29
SLC6A13-210ENST00000542947 FAM161AQ3B820 660 aa23.08■■□□□ 1.29
SLC6A13-210ENST00000542947 CCDC85AQ96PX6 553 aaPredicted RBP23.08■■□□□ 1.29
SLC6A13-210ENST00000542947 PIM2Q9P1W9 311 aa23.08■■□□□ 1.29
SLC6A13-210ENST00000542947 KCNA3P22001 575 aa23.07■■□□□ 1.28
SLC6A13-210ENST00000542947 IFIT5Q13325 482 aaKnown RBP23.07■■□□□ 1.28
SLC6A13-210ENST00000542947 MTX1Q13505 466 aa23.07■■□□□ 1.28
SLC6A13-210ENST00000542947 CCDC57Q2TAC2 916 aa23.07■■□□□ 1.28
SLC6A13-210ENST00000542947 CDC5LQ99459 802 aaKnown RBP23.07■■□□□ 1.28
SLC6A13-210ENST00000542947 C1orf115Q9H7X2 142 aa23.07■■□□□ 1.28
SLC6A13-210ENST00000542947 ANKRD18BA2A2Z9 1011 aa23.06■■□□□ 1.28
SLC6A13-210ENST00000542947 ITGA6P23229 1130 aa23.06■■□□□ 1.28
SLC6A13-210ENST00000542947 GRAPQ13588 217 aa23.06■■□□□ 1.28
SLC6A13-210ENST00000542947 GRAPLQ8TC17 118 aaPredicted RBP23.06■■□□□ 1.28
SLC6A13-210ENST00000542947 CACNA1SQ13698 1873 aa23.06■■□□□ 1.28
SLC6A13-210ENST00000542947 TTLL6Q8N841 843 aa23.05■■□□□ 1.28
SLC6A13-210ENST00000542947 NEFLP07196 543 aa23.04■■□□□ 1.28
SLC6A13-210ENST00000542947 IRX6P78412 446 aaPredicted RBP23.04■■□□□ 1.28
SLC6A13-210ENST00000542947 TMC4Q7Z404 712 aa23.04■■□□□ 1.28
SLC6A13-210ENST00000542947 SEC31BQ9NQW1 1179 aa23.04■■□□□ 1.28
SLC6A13-210ENST00000542947 TAF1P21675 1872 aa23.04■■□□□ 1.28
SLC6A13-210ENST00000542947 SRGAP3O43295 1099 aa23.03■■□□□ 1.28
SLC6A13-210ENST00000542947 BBOX1O75936 387 aa23.03■■□□□ 1.28
SLC6A13-210ENST00000542947 DALRD3Q5D0E6 543 aaKnown RBP23.03■■□□□ 1.28
SLC6A13-210ENST00000542947 TAF7LQ5H9L4 462 aa23.03■■□□□ 1.28
SLC6A13-210ENST00000542947 PRPF40BQ6NWY9 871 aaKnown RBP23.03■■□□□ 1.28
SLC6A13-210ENST00000542947 CEP85Q6P2H3 762 aa23.03■■□□□ 1.28
SLC6A13-210ENST00000542947 ANKRD18AQ8IVF6 992 aa23.03■■□□□ 1.28
SLC6A13-210ENST00000542947 RPAP2Q8IXW5 612 aaPredicted RBP23.03■■□□□ 1.28
SLC6A13-210ENST00000542947 EXOC6Q8TAG9 804 aa23.03■■□□□ 1.28
SLC6A13-210ENST00000542947 IGHMBP2P38935 993 aaKnown RBP23.02■■□□□ 1.28
SLC6A13-210ENST00000542947 RPS8P62241 208 aaKnown RBP23.02■■□□□ 1.28
SLC6A13-210ENST00000542947 SLX4Q8IY92 1834 aa23.01■■□□□ 1.27
SLC6A13-210ENST00000542947 PPEF1O14829 653 aaPredicted RBP23.01■■□□□ 1.27
SLC6A13-210ENST00000542947 ATP8B2P98198 1209 aa23.01■■□□□ 1.27
SLC6A13-210ENST00000542947 CELF1Q92879 486 aaKnown RBP23.01■■□□□ 1.27
SLC6A13-210ENST00000542947 SPEF2Q9C093 1822 aa23.01■■□□□ 1.27
SLC6A13-210ENST00000542947 ARFGEF1Q9Y6D6 1849 aa23.01■■□□□ 1.27
SLC6A13-210ENST00000542947 MPHOSPH8Q99549 860 aa23■■□□□ 1.27
SLC6A13-210ENST00000542947 TMX4Q9H1E5 349 aaPredicted RBP23■■□□□ 1.27
SLC6A13-210ENST00000542947 HMMRO75330 724 aa22.99■■□□□ 1.27
SLC6A13-210ENST00000542947 BCS1LQ9Y276 419 aa22.99■■□□□ 1.27
SLC6A13-210ENST00000542947 COL4A1P02462 1669 aa22.98■■□□□ 1.27
SLC6A13-210ENST00000542947 PNMA6EA0A0J9YXQ4 647 aa22.98■■□□□ 1.27
SLC6A13-210ENST00000542947 RFX5P48382 616 aaPredicted RBP22.98■■□□□ 1.27
SLC6A13-210ENST00000542947 SOGA3Q5TF21 947 aa22.98■■□□□ 1.27
SLC6A13-210ENST00000542947 SSH3Q8TE77 659 aa22.98■■□□□ 1.27
SLC6A13-210ENST00000542947 BSDC1Q9NW68 430 aaPredicted RBP22.98■■□□□ 1.27
SLC6A13-210ENST00000542947 LRRC37AA6NMS7 1700 aa22.98■■□□□ 1.27
SLC6A13-210ENST00000542947 POLA2Q14181 598 aa22.97■■□□□ 1.27
SLC6A13-210ENST00000542947 CC2D2BQ6DHV5 1058 aa22.97■■□□□ 1.27
SLC6A13-210ENST00000542947 COPRSQ9NQ92 184 aa22.97■■□□□ 1.27
SLC6A13-210ENST00000542947 FBXO3Q9UK99 471 aa22.97■■□□□ 1.27
SLC6A13-210ENST00000542947 ATP6V0A2Q9Y487 856 aa22.97■■□□□ 1.27
SLC6A13-210ENST00000542947 PTPN12Q05209 780 aaKnown RBP22.96■■□□□ 1.27
SLC6A13-210ENST00000542947 GRIPAP1Q4V328 841 aa22.96■■□□□ 1.27
SLC6A13-210ENST00000542947 LDHAL6AQ6ZMR3 332 aa22.96■■□□□ 1.27
SLC6A13-210ENST00000542947 SP8Q8IXZ3 490 aa22.96■■□□□ 1.27
SLC6A13-210ENST00000542947 ZNF594Q96JF6 807 aaPredicted RBP22.96■■□□□ 1.27
SLC6A13-210ENST00000542947 CNNM1Q9NRU3 951 aa22.95■■□□□ 1.26
SLC6A13-210ENST00000542947 WWC3Q9ULE0 1092 aa22.95■■□□□ 1.26
SLC6A13-210ENST00000542947 C21orf2O43822 256 aa22.94■■□□□ 1.26
SLC6A13-210ENST00000542947 C7orf43Q8WVR3 580 aa22.94■■□□□ 1.26
SLC6A13-210ENST00000542947 EYA2O00167 538 aa22.93■■□□□ 1.26
SLC6A13-210ENST00000542947 CIAO1O76071 339 aa22.93■■□□□ 1.26
SLC6A13-210ENST00000542947 CCDC93Q567U6 631 aa22.93■■□□□ 1.26
SLC6A13-210ENST00000542947 KLHDC4Q8TBB5 520 aa22.93■■□□□ 1.26
SLC6A13-210ENST00000542947 PCDHB15Q9Y5E8 787 aa22.93■■□□□ 1.26
SLC6A13-210ENST00000542947 SIRT2Q8IXJ6 389 aa22.92■■□□□ 1.26
SLC6A13-210ENST00000542947 PELP1Q8IZL8 1130 aaKnown RBP22.92■■□□□ 1.26
SLC6A13-210ENST00000542947 ZNF219Q9P2Y4 722 aaPredicted RBP22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms