RNA–Protein interactions for RNA: ENST00000542922.5

SLC3A2-220, Transcript of solute carrier family 3 member 2, humanhuman

TSL 2

Gene SLC3A2, Length 2,174 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-220ENST00000542922 ZNF594Q96JF6 807 aaPredicted RBP16.44■□□□□ 0.22
SLC3A2-220ENST00000542922 ZNF330Q9Y3S2 320 aaPredicted RBP16.44■□□□□ 0.22
SLC3A2-220ENST00000542922 CYP46A1Q9Y6A2 500 aa16.44■□□□□ 0.22
SLC3A2-220ENST00000542922 ZNF609O15014 1411 aa16.43■□□□□ 0.22
SLC3A2-220ENST00000542922 GADD45BO75293 160 aaPredicted RBP16.43■□□□□ 0.22
SLC3A2-220ENST00000542922 SLFNL1Q499Z3 407 aa16.43■□□□□ 0.22
SLC3A2-220ENST00000542922 VPS53Q5VIR6 699 aa16.43■□□□□ 0.22
SLC3A2-220ENST00000542922 NECAB1Q8N987 351 aa16.43■□□□□ 0.22
SLC3A2-220ENST00000542922 SEC62Q99442 399 aaKnown RBP16.43■□□□□ 0.22
SLC3A2-220ENST00000542922 WDR33Q9C0J8 1336 aaKnown RBP16.43■□□□□ 0.22
SLC3A2-220ENST00000542922 DDX46Q7L014 1031 aaKnown RBP16.43■□□□□ 0.22
SLC3A2-220ENST00000542922 TM6SF1Q9BZW5 370 aa16.43■□□□□ 0.22
SLC3A2-220ENST00000542922 ASAP1Q9ULH1 1129 aa16.43■□□□□ 0.22
SLC3A2-220ENST00000542922 JCADQ9P266 1359 aa16.42■□□□□ 0.22
SLC3A2-220ENST00000542922 SYT1P21579 422 aa16.42■□□□□ 0.22
SLC3A2-220ENST00000542922 PRIM1P49642 420 aaKnown RBP16.42■□□□□ 0.22
SLC3A2-220ENST00000542922 ME3Q16798 604 aa16.42■□□□□ 0.22
SLC3A2-220ENST00000542922 LRRC24Q50LG9 513 aa16.42■□□□□ 0.22
SLC3A2-220ENST00000542922 ZKSCAN1P17029 563 aaPredicted RBP16.41■□□□□ 0.22
SLC3A2-220ENST00000542922 NASPP49321 788 aaPredicted RBP16.41■□□□□ 0.22
SLC3A2-220ENST00000542922 RBSNQ9H1K0 784 aa16.41■□□□□ 0.22
SLC3A2-220ENST00000542922 TPCN1Q9ULQ1 816 aa16.41■□□□□ 0.22
SLC3A2-220ENST00000542922 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.41■□□□□ 0.22
SLC3A2-220ENST00000542922 SYCE3A1L190 88 aa16.41■□□□□ 0.22
SLC3A2-220ENST00000542922 TAF5LO75529 589 aa16.41■□□□□ 0.22
SLC3A2-220ENST00000542922 SMC3Q9UQE7 1217 aa16.41■□□□□ 0.22
SLC3A2-220ENST00000542922 KAT6BQ8WYB5 2073 aa16.4■□□□□ 0.22
SLC3A2-220ENST00000542922 ITGB4P16144 1822 aa16.4■□□□□ 0.22
SLC3A2-220ENST00000542922 GJB2P29033 226 aa16.4■□□□□ 0.22
SLC3A2-220ENST00000542922 TIMM10P62072 90 aa16.4■□□□□ 0.22
SLC3A2-220ENST00000542922 DNAJC10Q8IXB1 793 aa16.4■□□□□ 0.22
SLC3A2-220ENST00000542922 PUS3Q9BZE2 481 aaKnown RBP16.4■□□□□ 0.22
SLC3A2-220ENST00000542922 TMOD3Q9NYL9 352 aa16.4■□□□□ 0.22
SLC3A2-220ENST00000542922 CNPY2Q9Y2B0 182 aa16.4■□□□□ 0.22
SLC3A2-220ENST00000542922 STX6O43752 255 aa16.4■□□□□ 0.22
SLC3A2-220ENST00000542922 ZSCAN22P10073 491 aaPredicted RBP16.4■□□□□ 0.22
SLC3A2-220ENST00000542922 TPRNQ4KMQ1 711 aa16.4■□□□□ 0.22
SLC3A2-220ENST00000542922 USP48Q86UV5 1035 aa16.4■□□□□ 0.22
SLC3A2-220ENST00000542922 PIGBQ92521 554 aa16.4■□□□□ 0.22
SLC3A2-220ENST00000542922 NEUROD6Q96NK8 337 aa16.4■□□□□ 0.22
SLC3A2-220ENST00000542922 HAUS7Q99871 368 aa16.4■□□□□ 0.22
SLC3A2-220ENST00000542922 CCDC85AQ96PX6 553 aaPredicted RBP16.39■□□□□ 0.21
SLC3A2-220ENST00000542922 BTG4Q9NY30 223 aa16.39■□□□□ 0.21
SLC3A2-220ENST00000542922 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.39■□□□□ 0.21
SLC3A2-220ENST00000542922 CCDC191Q8NCU4 936 aa16.38■□□□□ 0.21
SLC3A2-220ENST00000542922 TOB2Q14106 344 aaPredicted RBP16.37■□□□□ 0.21
SLC3A2-220ENST00000542922 ISCA1Q9BUE6 129 aa16.37■□□□□ 0.21
SLC3A2-220ENST00000542922 ATG3Q9NT62 314 aa16.37■□□□□ 0.21
SLC3A2-220ENST00000542922 GOLIM4O00461 696 aa16.37■□□□□ 0.21
SLC3A2-220ENST00000542922 MBD3O95983 291 aa16.37■□□□□ 0.21
SLC3A2-220ENST00000542922 F13A1P00488 732 aa16.37■□□□□ 0.21
SLC3A2-220ENST00000542922 RPS6KB1P23443 525 aa16.37■□□□□ 0.21
SLC3A2-220ENST00000542922 BLOC1S2Q6QNY1 142 aa16.37■□□□□ 0.21
SLC3A2-220ENST00000542922 MTMR6Q9Y217 621 aa16.37■□□□□ 0.21
SLC3A2-220ENST00000542922 EYA2O00167 538 aa16.36■□□□□ 0.21
SLC3A2-220ENST00000542922 SYNE4Q8N205 404 aa16.36■□□□□ 0.21
SLC3A2-220ENST00000542922 SH2B1Q9NRF2 756 aaPredicted RBP16.36■□□□□ 0.21
SLC3A2-220ENST00000542922 USPL1Q5W0Q7 1092 aa16.36■□□□□ 0.21
SLC3A2-220ENST00000542922 FAM89AQ96GI7 184 aa16.36■□□□□ 0.21
SLC3A2-220ENST00000542922 ZSCAN31Q96LW9 406 aaPredicted RBP16.36■□□□□ 0.21
SLC3A2-220ENST00000542922 PSMA5P28066 241 aa16.35■□□□□ 0.21
SLC3A2-220ENST00000542922 IL15P40933 162 aaPredicted RBP16.35■□□□□ 0.21
SLC3A2-220ENST00000542922 TCIRG1Q13488 830 aa16.35■□□□□ 0.21
SLC3A2-220ENST00000542922 RNF20Q5VTR2 975 aa16.35■□□□□ 0.21
SLC3A2-220ENST00000542922 LRSAM1Q6UWE0 723 aa16.35■□□□□ 0.21
SLC3A2-220ENST00000542922 KBTBD3Q8NAB2 608 aa16.35■□□□□ 0.21
SLC3A2-220ENST00000542922 RFX7Q2KHR2 1363 aa16.35■□□□□ 0.21
SLC3A2-220ENST00000542922 LAMA4Q16363 1823 aa16.34■□□□□ 0.21
SLC3A2-220ENST00000542922 A0A0G2JLW4 131 aa16.34■□□□□ 0.21
SLC3A2-220ENST00000542922 A0A1B0GUL7 405 aa16.34■□□□□ 0.21
SLC3A2-220ENST00000542922 FIBPO43427 364 aa16.34■□□□□ 0.21
SLC3A2-220ENST00000542922 STK3Q13188 491 aa16.34■□□□□ 0.21
SLC3A2-220ENST00000542922 SLC4A9Q96Q91 983 aa16.34■□□□□ 0.21
SLC3A2-220ENST00000542922 CYP21A2P08686 494 aa16.34■□□□□ 0.21
SLC3A2-220ENST00000542922 MCMDC2Q4G0Z9 681 aa16.34■□□□□ 0.21
SLC3A2-220ENST00000542922 PAG1Q9NWQ8 432 aa16.34■□□□□ 0.21
SLC3A2-220ENST00000542922 VPS37CA5D8V6 355 aaPredicted RBP16.33■□□□□ 0.2
SLC3A2-220ENST00000542922 ADORA1P30542 326 aa16.33■□□□□ 0.2
SLC3A2-220ENST00000542922 HLFQ16534 295 aa16.33■□□□□ 0.2
SLC3A2-220ENST00000542922 STOX1Q6ZVD7 989 aa16.33■□□□□ 0.2
SLC3A2-220ENST00000542922 TMEM87AQ8NBN3 555 aa16.33■□□□□ 0.2
SLC3A2-220ENST00000542922 PPP1R9BQ96SB3 815 aa16.33■□□□□ 0.2
SLC3A2-220ENST00000542922 PALLDQ8WX93 1383 aa16.33■□□□□ 0.2
SLC3A2-220ENST00000542922 DISP2A7MBM2 1401 aa16.33■□□□□ 0.2
SLC3A2-220ENST00000542922 GPTP24298 496 aa16.33■□□□□ 0.2
SLC3A2-220ENST00000542922 DNM1Q05193 864 aaKnown RBP16.33■□□□□ 0.2
SLC3A2-220ENST00000542922 CCDC173Q0VFZ6 552 aa16.33■□□□□ 0.2
SLC3A2-220ENST00000542922 TSGA10IPQ3SY00 556 aa16.33■□□□□ 0.2
SLC3A2-220ENST00000542922 RNF214Q8ND24 703 aa16.33■□□□□ 0.2
SLC3A2-220ENST00000542922 HMG20BQ9P0W2 317 aa16.33■□□□□ 0.2
SLC3A2-220ENST00000542922 CDC37L1Q7L3B6 337 aa16.32■□□□□ 0.2
SLC3A2-220ENST00000542922 LRRC2Q9BYS8 371 aa16.32■□□□□ 0.2
SLC3A2-220ENST00000542922 GPR108Q9NPR9 543 aa16.32■□□□□ 0.2
SLC3A2-220ENST00000542922 COL16A1Q07092 1604 aaPredicted RBP16.31■□□□□ 0.2
SLC3A2-220ENST00000542922 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.31■□□□□ 0.2
SLC3A2-220ENST00000542922 SH3TC1Q8TE82 1336 aa16.31■□□□□ 0.2
SLC3A2-220ENST00000542922 CIAO1O76071 339 aa16.31■□□□□ 0.2
SLC3A2-220ENST00000542922 FAM173BQ6P4H8 233 aa16.31■□□□□ 0.2
SLC3A2-220ENST00000542922 KIF6Q6ZMV9 814 aa16.31■□□□□ 0.2
SLC3A2-220ENST00000542922 FERMT3Q86UX7 667 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms