RNA–Protein interactions for RNA: ENST00000542879.5

ZEB1-209, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 3,645 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-209ENST00000542879 SPC24Q8NBT2 197 aa6.67□□□□□ -1.34
ZEB1-209ENST00000542879 UTYO14607 1347 aa6.67□□□□□ -1.34
ZEB1-209ENST00000542879 VPS37CA5D8V6 355 aaPredicted RBP6.67□□□□□ -1.34
ZEB1-209ENST00000542879 GIGYF1O75420 1035 aaPredicted RBP6.67□□□□□ -1.34
ZEB1-209ENST00000542879 NCBP1Q09161 790 aaKnown RBP6.67□□□□□ -1.34
ZEB1-209ENST00000542879 SAMD1Q6SPF0 538 aaPredicted RBP6.67□□□□□ -1.34
ZEB1-209ENST00000542879 LUZP1Q86V48 1076 aa6.67□□□□□ -1.34
ZEB1-209ENST00000542879 PDCL2Q8N4E4 241 aa6.67□□□□□ -1.34
ZEB1-209ENST00000542879 CLSTN2Q9H4D0 955 aa6.67□□□□□ -1.34
ZEB1-209ENST00000542879 SCN11AQ9UI33 1791 aa6.67□□□□□ -1.34
ZEB1-209ENST00000542879 CDC25BP30305 580 aa6.67□□□□□ -1.34
ZEB1-209ENST00000542879 ZNF75DP51815 510 aa6.67□□□□□ -1.34
ZEB1-209ENST00000542879 CBX1P83916 185 aa6.67□□□□□ -1.34
ZEB1-209ENST00000542879 LARP1BQ659C4 914 aaKnown RBP6.67□□□□□ -1.34
ZEB1-209ENST00000542879 CLASRPQ8N2M8 674 aaKnown RBP6.67□□□□□ -1.34
ZEB1-209ENST00000542879 FAM227BQ96M60 508 aa6.67□□□□□ -1.34
ZEB1-209ENST00000542879 UBR2Q8IWV8 1755 aa6.66□□□□□ -1.34
ZEB1-209ENST00000542879 ZBTB22O15209 634 aa6.66□□□□□ -1.34
ZEB1-209ENST00000542879 KCNQ3O43525 872 aa6.66□□□□□ -1.34
ZEB1-209ENST00000542879 ALDH1L1O75891 902 aa6.66□□□□□ -1.34
ZEB1-209ENST00000542879 RPS6KB1P23443 525 aa6.66□□□□□ -1.34
ZEB1-209ENST00000542879 NMIQ13287 307 aaPredicted RBP6.66□□□□□ -1.34
ZEB1-209ENST00000542879 TPRNQ4KMQ1 711 aa6.66□□□□□ -1.34
ZEB1-209ENST00000542879 ANO6Q4KMQ2 910 aa6.66□□□□□ -1.34
ZEB1-209ENST00000542879 LEO1Q8WVC0 666 aaPredicted RBP6.66□□□□□ -1.34
ZEB1-209ENST00000542879 KAZALD1Q96I82 304 aa6.66□□□□□ -1.34
ZEB1-209ENST00000542879 PGBD1Q96JS3 809 aa6.66□□□□□ -1.34
ZEB1-209ENST00000542879 DDX19AQ9NUU7 478 aaKnown RBP6.66□□□□□ -1.34
ZEB1-209ENST00000542879 TAF6LQ9Y6J9 622 aa6.66□□□□□ -1.34
ZEB1-209ENST00000542879 NPHP3Q7Z494 1330 aa6.66□□□□□ -1.34
ZEB1-209ENST00000542879 NHSQ6T4R5 1651 aa6.66□□□□□ -1.34
ZEB1-209ENST00000542879 SASH1O94885 1247 aa6.66□□□□□ -1.34
ZEB1-209ENST00000542879 PDCP20941 246 aa6.66□□□□□ -1.34
ZEB1-209ENST00000542879 LRMPQ12912 555 aa6.66□□□□□ -1.34
ZEB1-209ENST00000542879 ZSCAN25Q6NSZ9 544 aa6.66□□□□□ -1.34
ZEB1-209ENST00000542879 FAM173BQ6P4H8 233 aa6.66□□□□□ -1.34
ZEB1-209ENST00000542879 ERC1Q8IUD2 1116 aa6.66□□□□□ -1.34
ZEB1-209ENST00000542879 SCAND2PQ9GZW5 306 aaPredicted RBP6.66□□□□□ -1.34
ZEB1-209ENST00000542879 LGR6Q9HBX8 967 aa6.66□□□□□ -1.34
ZEB1-209ENST00000542879 DACT1Q9NYF0 836 aa6.66□□□□□ -1.34
ZEB1-209ENST00000542879 NRBP1Q9UHY1 535 aa6.66□□□□□ -1.34
ZEB1-209ENST00000542879 AMOTL2Q9Y2J4 779 aa6.66□□□□□ -1.34
ZEB1-209ENST00000542879 LY75O60449 1722 aa6.66□□□□□ -1.34
ZEB1-209ENST00000542879 COL15A1P39059 1388 aa6.66□□□□□ -1.34
ZEB1-209ENST00000542879 RGPD5Q99666 1765 aa6.65□□□□□ -1.34
ZEB1-209ENST00000542879 A0A0D9SFI3 127 aa6.65□□□□□ -1.34
ZEB1-209ENST00000542879 SMTNL1A8MU46 457 aa6.65□□□□□ -1.34
ZEB1-209ENST00000542879 HIP1O00291 1037 aa6.65□□□□□ -1.34
ZEB1-209ENST00000542879 NLRP6P59044 892 aa6.65□□□□□ -1.34
ZEB1-209ENST00000542879 USPL1Q5W0Q7 1092 aa6.65□□□□□ -1.34
ZEB1-209ENST00000542879 CCDC186Q7Z3E2 898 aa6.65□□□□□ -1.34
ZEB1-209ENST00000542879 ZFP91Q96JP5 570 aaPredicted RBP6.65□□□□□ -1.34
ZEB1-209ENST00000542879 PA2G4Q9UQ80 394 aaKnown RBP6.65□□□□□ -1.34
ZEB1-209ENST00000542879 ZKSCAN1P17029 563 aaPredicted RBP6.65□□□□□ -1.34
ZEB1-209ENST00000542879 TRHP20396 242 aaPredicted RBP6.65□□□□□ -1.34
ZEB1-209ENST00000542879 U2AF2P26368 475 aaKnown RBP eCLIP6.65□□□□□ -1.347e-7■■■■■ 29.9
ZEB1-209ENST00000542879 PSMA5P28066 241 aa6.65□□□□□ -1.34
ZEB1-209ENST00000542879 PLCB2Q00722 1185 aa6.65□□□□□ -1.34
ZEB1-209ENST00000542879 CHAF1AQ13111 956 aaPredicted RBP6.65□□□□□ -1.34
ZEB1-209ENST00000542879 RESTQ13127 1097 aa6.65□□□□□ -1.34
ZEB1-209ENST00000542879 CAMK4Q16566 473 aa6.65□□□□□ -1.34
ZEB1-209ENST00000542879 LARP1Q6PKG0 1096 aaKnown RBP6.65□□□□□ -1.34
ZEB1-209ENST00000542879 NGDNQ8NEJ9 315 aaKnown RBP6.65□□□□□ -1.34
ZEB1-209ENST00000542879 DDX54Q8TDD1 881 aaKnown RBP6.65□□□□□ -1.34
ZEB1-209ENST00000542879 FEZ1Q99689 392 aa6.65□□□□□ -1.34
ZEB1-209ENST00000542879 TNMDQ9H2S6 317 aa6.65□□□□□ -1.34
ZEB1-209ENST00000542879 ARFGEF2Q9Y6D5 1785 aa6.65□□□□□ -1.34
ZEB1-209ENST00000542879 NR1I2O75469 434 aa6.65□□□□□ -1.35
ZEB1-209ENST00000542879 EIF2S2P20042 333 aaKnown RBP6.65□□□□□ -1.35
ZEB1-209ENST00000542879 IQCB1Q15051 598 aa6.65□□□□□ -1.35
ZEB1-209ENST00000542879 ANKRD1Q15327 319 aa6.65□□□□□ -1.35
ZEB1-209ENST00000542879 SARM1Q6SZW1 724 aa6.65□□□□□ -1.35
ZEB1-209ENST00000542879 FERMT3Q86UX7 667 aa6.65□□□□□ -1.35
ZEB1-209ENST00000542879 THEMISQ8N1K5 641 aaPredicted RBP6.65□□□□□ -1.35
ZEB1-209ENST00000542879 USHBP1Q8N6Y0 703 aa6.65□□□□□ -1.35
ZEB1-209ENST00000542879 SECISBP2LQ93073 1101 aaKnown RBP6.65□□□□□ -1.35
ZEB1-209ENST00000542879 EAF2Q96CJ1 260 aaPredicted RBP6.65□□□□□ -1.35
ZEB1-209ENST00000542879 GPATCH3Q96I76 525 aa6.65□□□□□ -1.35
ZEB1-209ENST00000542879 CTNNA3Q9UI47 895 aa6.65□□□□□ -1.35
ZEB1-209ENST00000542879 ERBB3P21860 1342 aa6.65□□□□□ -1.35
ZEB1-209ENST00000542879 KIF20AO95235 890 aa6.64□□□□□ -1.35
ZEB1-209ENST00000542879 ANXA1P04083 346 aa6.64□□□□□ -1.35
ZEB1-209ENST00000542879 CCDC144BQ3MJ40 725 aa6.64□□□□□ -1.35
ZEB1-209ENST00000542879 CCDC144CPQ8IYA2 1237 aa6.64□□□□□ -1.35
ZEB1-209ENST00000542879 CKAP2LQ8IYA6 745 aa6.64□□□□□ -1.35
ZEB1-209ENST00000542879 SPATA32Q96LK8 384 aa6.64□□□□□ -1.35
ZEB1-209ENST00000542879 CHMP4AQ9BY43 222 aa6.64□□□□□ -1.35
ZEB1-209ENST00000542879 IFIT2P09913 472 aaKnown RBP6.64□□□□□ -1.35
ZEB1-209ENST00000542879 RBM6P78332 1123 aaKnown RBP6.64□□□□□ -1.35
ZEB1-209ENST00000542879 AACSQ86V21 672 aa6.64□□□□□ -1.35
ZEB1-209ENST00000542879 CACTINQ8WUQ7 758 aaKnown RBP6.64□□□□□ -1.35
ZEB1-209ENST00000542879 SLC26A8Q96RN1 970 aa6.64□□□□□ -1.35
ZEB1-209ENST00000542879 KCND1Q9NSA2 647 aa6.64□□□□□ -1.35
ZEB1-209ENST00000542879 TLR7Q9NYK1 1049 aaKnown RBP6.64□□□□□ -1.35
ZEB1-209ENST00000542879 HMG20BQ9P0W2 317 aa6.64□□□□□ -1.35
ZEB1-209ENST00000542879 ADD1P35611 737 aaKnown RBP6.64□□□□□ -1.35
ZEB1-209ENST00000542879 OS9Q13438 667 aaPredicted RBP6.64□□□□□ -1.35
ZEB1-209ENST00000542879 RFX7Q2KHR2 1363 aa6.64□□□□□ -1.35
ZEB1-209ENST00000542879 PROSER3Q2NL68 480 aa6.64□□□□□ -1.35
ZEB1-209ENST00000542879 NBPF6Q5VWK0 638 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms