RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 ZNF697Q5TEC3 545 aa4.62□□□□□ -1.67
CHD4-209ENST00000542717 MOB2Q70IA6 237 aa4.62□□□□□ -1.67
CHD4-209ENST00000542717 NUTM1Q86Y26 1132 aa4.62□□□□□ -1.67
CHD4-209ENST00000542717 TDHQ8IZJ6 230 aa4.62□□□□□ -1.67
CHD4-209ENST00000542717 NKX2-3Q8TAU0 364 aa4.62□□□□□ -1.67
CHD4-209ENST00000542717 SH3TC2Q8TF17 1288 aa4.62□□□□□ -1.67
CHD4-209ENST00000542717 CFHR5Q9BXR6 569 aa4.62□□□□□ -1.67
CHD4-209ENST00000542717 FLT4P35916 1363 aa4.62□□□□□ -1.67
CHD4-209ENST00000542717 COL4A5P29400 1685 aa4.61□□□□□ -1.67
CHD4-209ENST00000542717 ANKRD26Q9UPS8 1709 aa4.61□□□□□ -1.67
CHD4-209ENST00000542717 FARP2O94887 1054 aaPredicted RBP4.61□□□□□ -1.67
CHD4-209ENST00000542717 BMP8BP34820 402 aa4.61□□□□□ -1.67
CHD4-209ENST00000542717 SP3Q02447 781 aa4.61□□□□□ -1.67
CHD4-209ENST00000542717 GRIPAP1Q4V328 841 aa4.61□□□□□ -1.67
CHD4-209ENST00000542717 C1orf141Q5JVX7 400 aa4.61□□□□□ -1.67
CHD4-209ENST00000542717 ZNF530Q6P9A1 599 aaPredicted RBP4.61□□□□□ -1.67
CHD4-209ENST00000542717 IL27Q8NEV9 243 aa4.61□□□□□ -1.67
CHD4-209ENST00000542717 CNKSR2Q8WXI2 1034 aa4.61□□□□□ -1.67
CHD4-209ENST00000542717 RPGRQ92834 1020 aaKnown RBP4.61□□□□□ -1.67
CHD4-209ENST00000542717 C1QTNF1Q9BXJ1 281 aa4.61□□□□□ -1.67
CHD4-209ENST00000542717 UBE2OQ9C0C9 1292 aaKnown RBP4.61□□□□□ -1.67
CHD4-209ENST00000542717 GGA3Q9NZ52 723 aa4.61□□□□□ -1.67
CHD4-209ENST00000542717 ZMYND8Q9ULU4 1186 aaPredicted RBP4.61□□□□□ -1.67
CHD4-209ENST00000542717 ARIH1Q9Y4X5 557 aaPredicted RBP4.61□□□□□ -1.67
CHD4-209ENST00000542717 POLR2AP24928 1970 aaKnown RBP4.61□□□□□ -1.67
CHD4-209ENST00000542717 LAMA3Q16787 3333 aa4.61□□□□□ -1.67
CHD4-209ENST00000542717 TONSLQ96HA7 1378 aa4.61□□□□□ -1.67
CHD4-209ENST00000542717 ZNF609O15014 1411 aa4.61□□□□□ -1.67
CHD4-209ENST00000542717 MRC1P22897 1456 aa4.61□□□□□ -1.67
CHD4-209ENST00000542717 PRAMEF22A3QJZ6 481 aa4.6□□□□□ -1.67
CHD4-209ENST00000542717 STARD3NLO95772 234 aa4.6□□□□□ -1.67
CHD4-209ENST00000542717 KIF4BQ2VIQ3 1234 aa4.6□□□□□ -1.67
CHD4-209ENST00000542717 PLEKHO1Q53GL0 409 aaPredicted RBP4.6□□□□□ -1.67
CHD4-209ENST00000542717 OTUD7BQ6GQQ9 843 aa4.6□□□□□ -1.67
CHD4-209ENST00000542717 TPTE2Q6XPS3 522 aa4.6□□□□□ -1.67
CHD4-209ENST00000542717 IFNL1Q8IU54 200 aa4.6□□□□□ -1.67
CHD4-209ENST00000542717 SUPT20HQ8NEM7 779 aa4.6□□□□□ -1.67
CHD4-209ENST00000542717 SHISA4Q96DD7 197 aa4.6□□□□□ -1.67
CHD4-209ENST00000542717 CDX2Q99626 313 aaPredicted RBP4.6□□□□□ -1.67
CHD4-209ENST00000542717 GDF15Q99988 308 aa4.6□□□□□ -1.67
CHD4-209ENST00000542717 GGNBP2Q9H3C7 697 aa4.6□□□□□ -1.67
CHD4-209ENST00000542717 BIN2Q9UBW5 565 aaPredicted RBP4.6□□□□□ -1.67
CHD4-209ENST00000542717 RAB3GAP2Q9H2M9 1393 aa4.6□□□□□ -1.67
CHD4-209ENST00000542717 HTTP42858 3142 aa4.6□□□□□ -1.67
CHD4-209ENST00000542717 TJP1Q07157 1748 aa4.6□□□□□ -1.67
CHD4-209ENST00000542717 MANSC4A6NHS7 340 aaPredicted RBP4.59□□□□□ -1.67
CHD4-209ENST00000542717 EGFRP00533 1210 aa4.59□□□□□ -1.67
CHD4-209ENST00000542717 FOSL2P15408 326 aa4.59□□□□□ -1.67
CHD4-209ENST00000542717 NF2P35240 595 aa4.59□□□□□ -1.67
CHD4-209ENST00000542717 TNNT2P45379 298 aaPredicted RBP4.59□□□□□ -1.67
CHD4-209ENST00000542717 MRE11P49959 708 aa4.59□□□□□ -1.67
CHD4-209ENST00000542717 EIF5P55010 431 aaKnown RBP4.59□□□□□ -1.67
CHD4-209ENST00000542717 INHBEP58166 350 aa4.59□□□□□ -1.67
CHD4-209ENST00000542717 SLC39A6Q13433 755 aa4.59□□□□□ -1.67
CHD4-209ENST00000542717 MTFR1Q15390 333 aa4.59□□□□□ -1.67
CHD4-209ENST00000542717 C7orf61Q8IZ16 206 aa4.59□□□□□ -1.67
CHD4-209ENST00000542717 EYA1Q99502 592 aa4.59□□□□□ -1.67
CHD4-209ENST00000542717 RNF208Q9H0X6 261 aa4.59□□□□□ -1.67
CHD4-209ENST00000542717 POTEB2H3BUK9 544 aa4.58□□□□□ -1.68
CHD4-209ENST00000542717 SYN1P17600 705 aa4.58□□□□□ -1.68
CHD4-209ENST00000542717 GJA8P48165 433 aa4.58□□□□□ -1.68
CHD4-209ENST00000542717 CRHR2Q13324 411 aa4.58□□□□□ -1.68
CHD4-209ENST00000542717 PRKG1Q13976 671 aa4.58□□□□□ -1.68
CHD4-209ENST00000542717 KIF22Q14807 665 aa4.58□□□□□ -1.68
CHD4-209ENST00000542717 ANGEL2Q5VTE6 544 aaKnown RBP4.58□□□□□ -1.68
CHD4-209ENST00000542717 FAM109BQ6ICB4 259 aaPredicted RBP4.58□□□□□ -1.68
CHD4-209ENST00000542717 ADAMTS19Q8TE59 1207 aa4.58□□□□□ -1.68
CHD4-209ENST00000542717 MYLIPQ8WY64 445 aa4.58□□□□□ -1.68
CHD4-209ENST00000542717 DPF2Q92785 391 aa4.58□□□□□ -1.68
CHD4-209ENST00000542717 UHRF1Q96T88 793 aaPredicted RBP4.58□□□□□ -1.68
CHD4-209ENST00000542717 VPS33BQ9H267 617 aa4.58□□□□□ -1.68
CHD4-209ENST00000542717 ZNF652Q9Y2D9 606 aa4.58□□□□□ -1.68
CHD4-209ENST00000542717 EMILIN1Q9Y6C2 1016 aa4.58□□□□□ -1.68
CHD4-209ENST00000542717 PIEZO1Q92508 2521 aa4.58□□□□□ -1.68
CHD4-209ENST00000542717 CACNA1GO43497 2377 aa4.57□□□□□ -1.68
CHD4-209ENST00000542717 ASTN2O75129 1339 aaPredicted RBP4.57□□□□□ -1.68
CHD4-209ENST00000542717 KLRG2A4D1S0 409 aaPredicted RBP4.57□□□□□ -1.68
CHD4-209ENST00000542717 IGF2BP3O00425 579 aaKnown RBP eCLIP4.57□□□□□ -1.68
CHD4-209ENST00000542717 PSMD14O00487 310 aa4.57□□□□□ -1.68
CHD4-209ENST00000542717 CAMTA2O94983 1202 aa4.57□□□□□ -1.68
CHD4-209ENST00000542717 GJB1P08034 283 aa4.57□□□□□ -1.68
CHD4-209ENST00000542717 MAGEA10P43363 369 aaPredicted RBP4.57□□□□□ -1.68
CHD4-209ENST00000542717 PTPN12Q05209 780 aaKnown RBP4.57□□□□□ -1.68
CHD4-209ENST00000542717 AMOTQ4VCS5 1084 aa4.57□□□□□ -1.68
CHD4-209ENST00000542717 PRAMEF18Q5VWM3 479 aa4.57□□□□□ -1.68
CHD4-209ENST00000542717 SPRYD7Q5W111 196 aa4.57□□□□□ -1.68
CHD4-209ENST00000542717 DPP8Q6V1X1 898 aaPredicted RBP4.57□□□□□ -1.68
CHD4-209ENST00000542717 ARMC9Q7Z3E5 817 aa4.57□□□□□ -1.68
CHD4-209ENST00000542717 DZIP3Q86Y13 1208 aaKnown RBP4.57□□□□□ -1.68
CHD4-209ENST00000542717 SLC10A4Q96EP9 437 aa4.57□□□□□ -1.68
CHD4-209ENST00000542717 LRFN3Q9BTN0 628 aa4.57□□□□□ -1.68
CHD4-209ENST00000542717 SCAF8Q9UPN6 1271 aaKnown RBP4.57□□□□□ -1.68
CHD4-209ENST00000542717 NIP7Q9Y221 180 aaKnown RBP eCLIP4.57□□□□□ -1.68
CHD4-209ENST00000542717 SNED1Q8TER0 1413 aa4.56□□□□□ -1.68
CHD4-209ENST00000542717 KIF24Q5T7B8 1368 aa4.56□□□□□ -1.68
CHD4-209ENST00000542717 KIF7Q2M1P5 1343 aa4.56□□□□□ -1.68
CHD4-209ENST00000542717 RGL2O15211 777 aa4.56□□□□□ -1.68
CHD4-209ENST00000542717 TFRCP02786 760 aaKnown RBP4.56□□□□□ -1.68
CHD4-209ENST00000542717 CCL5P13501 91 aa4.56□□□□□ -1.68
CHD4-209ENST00000542717 RPS12P25398 132 aaKnown RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms