RNA–Protein interactions for RNA: ENST00000542555.1

CLPB-211, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2

Gene CLPB, Length 421 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-211ENST00000542555 PPFIA3O75145 1194 aa11.38□□□□□ -0.59
CLPB-211ENST00000542555 SUZ12Q15022 739 aaKnown RBP11.38□□□□□ -0.59
CLPB-211ENST00000542555 ITPKCQ96DU7 683 aa11.38□□□□□ -0.59
CLPB-211ENST00000542555 WNK3Q9BYP7 1800 aa11.37□□□□□ -0.59
CLPB-211ENST00000542555 KCNMA1Q12791 1236 aa11.37□□□□□ -0.59
CLPB-211ENST00000542555 ZNF827Q17R98 1081 aa11.37□□□□□ -0.59
CLPB-211ENST00000542555 LYPD8Q6UX82 237 aa11.37□□□□□ -0.59
CLPB-211ENST00000542555 FOXJ1Q92949 421 aa11.37□□□□□ -0.59
CLPB-211ENST00000542555 SYTL4Q96C24 671 aaPredicted RBP11.37□□□□□ -0.59
CLPB-211ENST00000542555 NHSQ6T4R5 1651 aa11.36□□□□□ -0.59
CLPB-211ENST00000542555 SPTLC1O15269 473 aa11.36□□□□□ -0.59
CLPB-211ENST00000542555 HSPA6P17066 643 aa11.36□□□□□ -0.59
CLPB-211ENST00000542555 NBPF1Q3BBV0 1214 aa11.36□□□□□ -0.59
CLPB-211ENST00000542555 KCTD17Q8N5Z5 321 aa11.36□□□□□ -0.59
CLPB-211ENST00000542555 DDX54Q8TDD1 881 aaKnown RBP11.36□□□□□ -0.59
CLPB-211ENST00000542555 KIAA1210Q9ULL0 1709 aa11.35□□□□□ -0.59
CLPB-211ENST00000542555 DIXDC1Q155Q3 683 aa11.35□□□□□ -0.59
CLPB-211ENST00000542555 QRICH2Q9H0J4 1663 aa11.35□□□□□ -0.59
CLPB-211ENST00000542555 COL18A1P39060 1754 aa11.34□□□□□ -0.59
CLPB-211ENST00000542555 KTN1Q86UP2 1357 aaKnown RBP11.34□□□□□ -0.59
CLPB-211ENST00000542555 BPHLQ86WA6 291 aaPredicted RBP11.34□□□□□ -0.59
CLPB-211ENST00000542555 LINC00528Q8N1L1 170 aa11.34□□□□□ -0.59
CLPB-211ENST00000542555 NLGN2Q8NFZ4 835 aa11.34□□□□□ -0.59
CLPB-211ENST00000542555 LRRC4BQ9NT99 713 aa11.34□□□□□ -0.59
CLPB-211ENST00000542555 ABCC6O95255 1503 aa11.34□□□□□ -0.59
CLPB-211ENST00000542555 ATP10DQ9P241 1426 aa11.34□□□□□ -0.59
CLPB-211ENST00000542555 PNPLA7Q6ZV29 1317 aa11.34□□□□□ -0.59
CLPB-211ENST00000542555 ANKRD24Q8TF21 1146 aa11.33□□□□□ -0.6
CLPB-211ENST00000542555 ZNF526Q8TF50 670 aaPredicted RBP11.33□□□□□ -0.6
CLPB-211ENST00000542555 BEGAINQ9BUH8 593 aa11.33□□□□□ -0.6
CLPB-211ENST00000542555 TRPM1Q7Z4N2 1603 aa11.33□□□□□ -0.6
CLPB-211ENST00000542555 PIK3C2AO00443 1686 aa11.33□□□□□ -0.6
CLPB-211ENST00000542555 NR3C2P08235 984 aa11.32□□□□□ -0.6
CLPB-211ENST00000542555 GJA5P36382 358 aa11.32□□□□□ -0.6
CLPB-211ENST00000542555 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.32□□□□□ -0.6
CLPB-211ENST00000542555 TMEM151AQ8N4L1 468 aa11.32□□□□□ -0.6
CLPB-211ENST00000542555 FLAD1Q8NFF5 587 aa11.32□□□□□ -0.6
CLPB-211ENST00000542555 MAP10Q9P2G4 905 aa11.32□□□□□ -0.6
CLPB-211ENST00000542555 CCNL1Q9UK58 526 aaPredicted RBP11.32□□□□□ -0.6
CLPB-211ENST00000542555 BTAF1O14981 1849 aa11.31□□□□□ -0.6
CLPB-211ENST00000542555 RNF225M0QZC1 329 aaPredicted RBP11.31□□□□□ -0.6
CLPB-211ENST00000542555 YBX3P16989 372 aaKnown RBP eCLIP11.31□□□□□ -0.6
CLPB-211ENST00000542555 HDGFL2Q7Z4V5 671 aaPredicted RBP11.31□□□□□ -0.6
CLPB-211ENST00000542555 CD2APQ9Y5K6 639 aa11.31□□□□□ -0.6
CLPB-211ENST00000542555 PAPPAQ13219 1627 aa11.31□□□□□ -0.6
CLPB-211ENST00000542555 RGPD5Q99666 1765 aa11.31□□□□□ -0.6
CLPB-211ENST00000542555 KAT6BQ8WYB5 2073 aa11.31□□□□□ -0.6
CLPB-211ENST00000542555 SHANK3Q9BYB0 1731 aa11.3□□□□□ -0.6
CLPB-211ENST00000542555 CFAP99D6REC4 459 aa11.3□□□□□ -0.6
CLPB-211ENST00000542555 GRM5P41594 1212 aa11.3□□□□□ -0.6
CLPB-211ENST00000542555 GIGYF2Q6Y7W6 1299 aaKnown RBP11.3□□□□□ -0.6
CLPB-211ENST00000542555 TBC1D2Q9BYX2 928 aa11.3□□□□□ -0.6
CLPB-211ENST00000542555 ZBTB3Q9H5J0 574 aa11.3□□□□□ -0.6
CLPB-211ENST00000542555 USP47Q96K76 1375 aa11.29□□□□□ -0.6
CLPB-211ENST00000542555 GDF11O95390 407 aa11.29□□□□□ -0.6
CLPB-211ENST00000542555 RSBN1LQ6PCB5 846 aaPredicted RBP11.29□□□□□ -0.6
CLPB-211ENST00000542555 MEIOBQ8N635 442 aa11.29□□□□□ -0.6
CLPB-211ENST00000542555 KCNQ4P56696 695 aa11.28□□□□□ -0.6
CLPB-211ENST00000542555 MSL1Q68DK7 614 aa11.28□□□□□ -0.6
CLPB-211ENST00000542555 TMC1Q8TDI8 760 aa11.28□□□□□ -0.6
CLPB-211ENST00000542555 LTV1Q96GA3 475 aaPredicted RBP11.28□□□□□ -0.6
CLPB-211ENST00000542555 TSEN34Q9BSV6 310 aaKnown RBP11.28□□□□□ -0.6
CLPB-211ENST00000542555 DNMT3LQ9UJW3 386 aa11.28□□□□□ -0.6
CLPB-211ENST00000542555 QSER1Q2KHR3 1735 aa11.28□□□□□ -0.6
CLPB-211ENST00000542555 ANKRD36BQ8N2N9 1353 aa11.28□□□□□ -0.6
CLPB-211ENST00000542555 NFAT5O94916 1531 aa11.27□□□□□ -0.61
CLPB-211ENST00000542555 F12P00748 615 aaPredicted RBP11.27□□□□□ -0.61
CLPB-211ENST00000542555 RASSF7Q02833 373 aa11.27□□□□□ -0.61
CLPB-211ENST00000542555 COL23A1Q86Y22 540 aaPredicted RBP11.27□□□□□ -0.61
CLPB-211ENST00000542555 ZCRB1Q8TBF4 217 aaKnown RBP11.27□□□□□ -0.61
CLPB-211ENST00000542555 TSC1Q92574 1164 aa11.27□□□□□ -0.61
CLPB-211ENST00000542555 CNTNAP3BQ96NU0 1288 aa11.27□□□□□ -0.61
CLPB-211ENST00000542555 CNTNAP3Q9BZ76 1288 aa11.27□□□□□ -0.61
CLPB-211ENST00000542555 PCDHB15Q9Y5E8 787 aa11.27□□□□□ -0.61
CLPB-211ENST00000542555 AMHR2Q16671 573 aa11.26□□□□□ -0.61
CLPB-211ENST00000542555 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.26□□□□□ -0.61
CLPB-211ENST00000542555 C4orf48Q5BLP8 95 aa11.26□□□□□ -0.61
CLPB-211ENST00000542555 ARMC2Q8NEN0 867 aa11.26□□□□□ -0.61
CLPB-211ENST00000542555 TERF2IPQ9NYB0 399 aa11.26□□□□□ -0.61
CLPB-211ENST00000542555 USP31Q70CQ4 1352 aa11.26□□□□□ -0.61
CLPB-211ENST00000542555 FSHRP23945 695 aa11.25□□□□□ -0.61
CLPB-211ENST00000542555 AMPHP49418 695 aa11.25□□□□□ -0.61
CLPB-211ENST00000542555 VASH1Q7L8A9 365 aaPredicted RBP11.25□□□□□ -0.61
CLPB-211ENST00000542555 NME9Q86XW9 330 aa11.25□□□□□ -0.61
CLPB-211ENST00000542555 IP6K1Q92551 441 aa11.25□□□□□ -0.61
CLPB-211ENST00000542555 ADAMTS8Q9UP79 889 aa11.25□□□□□ -0.61
CLPB-211ENST00000542555 ROCK2O75116 1388 aaKnown RBP11.25□□□□□ -0.61
CLPB-211ENST00000542555 GSK3AP49840 483 aa11.24□□□□□ -0.61
CLPB-211ENST00000542555 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.24□□□□□ -0.61
CLPB-211ENST00000542555 C16orf71Q8IYS4 520 aaPredicted RBP11.24□□□□□ -0.61
CLPB-211ENST00000542555 AK7Q96M32 723 aa11.24□□□□□ -0.61
CLPB-211ENST00000542555 EMILIN1Q9Y6C2 1016 aa11.24□□□□□ -0.61
CLPB-211ENST00000542555 TTLL8A6PVC2 850 aa11.23□□□□□ -0.61
CLPB-211ENST00000542555 RAPGEF4Q8WZA2 1011 aa11.23□□□□□ -0.61
CLPB-211ENST00000542555 TOMM70O94826 608 aa11.22□□□□□ -0.61
CLPB-211ENST00000542555 CGNL1Q0VF96 1302 aa11.22□□□□□ -0.61
CLPB-211ENST00000542555 COL24A1Q17RW2 1714 aa11.22□□□□□ -0.61
CLPB-211ENST00000542555 CSPP1Q1MSJ5 1256 aa11.22□□□□□ -0.61
CLPB-211ENST00000542555 PRPF38BQ5VTL8 546 aaKnown RBP11.22□□□□□ -0.61
CLPB-211ENST00000542555 IGSF1Q8N6C5 1336 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms