RNA–Protein interactions for RNA: ENST00000542381.1

SRGAP1-204, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 360 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-204ENST00000542381 USP17L17D6RBQ6 530 aa10.42□□□□□ -0.74
SRGAP1-204ENST00000542381 USP17L19D6RCP7 530 aa10.42□□□□□ -0.74
SRGAP1-204ENST00000542381 USP17L20D6RJB6 530 aa10.42□□□□□ -0.74
SRGAP1-204ENST00000542381 MAP3K6O95382 1288 aa10.42□□□□□ -0.74
SRGAP1-204ENST00000542381 EPB42P16452 691 aa10.42□□□□□ -0.74
SRGAP1-204ENST00000542381 MLLT1Q03111 559 aaPredicted RBP10.42□□□□□ -0.74
SRGAP1-204ENST00000542381 USP17L24Q0WX57 530 aa10.42□□□□□ -0.74
SRGAP1-204ENST00000542381 DGKZQ13574 1117 aa10.42□□□□□ -0.74
SRGAP1-204ENST00000542381 IFT43Q96FT9 208 aa10.42□□□□□ -0.74
SRGAP1-204ENST00000542381 SASH3O75995 380 aa10.41□□□□□ -0.74
SRGAP1-204ENST00000542381 DHX32Q7L7V1 743 aaKnown RBP10.41□□□□□ -0.74
SRGAP1-204ENST00000542381 QTRT2Q9H974 415 aaKnown RBP10.41□□□□□ -0.74
SRGAP1-204ENST00000542381 KRTAP9-6A0A140TA67 174 aa10.4□□□□□ -0.74
SRGAP1-204ENST00000542381 FBXO11Q86XK2 927 aa10.4□□□□□ -0.74
SRGAP1-204ENST00000542381 TRPM4Q8TD43 1214 aa10.4□□□□□ -0.74
SRGAP1-204ENST00000542381 CALR3Q96L12 384 aaKnown RBP10.4□□□□□ -0.74
SRGAP1-204ENST00000542381 FRRS1LQ9P0K9 344 aa10.4□□□□□ -0.74
SRGAP1-204ENST00000542381 FAM196BA6NMK8 535 aa10.39□□□□□ -0.75
SRGAP1-204ENST00000542381 MICAL2O94851 1124 aa10.39□□□□□ -0.75
SRGAP1-204ENST00000542381 LMOD1P29536 600 aaPredicted RBP10.39□□□□□ -0.75
SRGAP1-204ENST00000542381 ARSDP51689 593 aa10.39□□□□□ -0.75
SRGAP1-204ENST00000542381 PCSK7Q16549 785 aa10.39□□□□□ -0.75
SRGAP1-204ENST00000542381 ARXQ96QS3 562 aa10.39□□□□□ -0.75
SRGAP1-204ENST00000542381 VRTNQ9H8Y1 702 aa10.39□□□□□ -0.75
SRGAP1-204ENST00000542381 USP20Q9Y2K6 914 aa10.39□□□□□ -0.75
SRGAP1-204ENST00000542381 ELMSAN1Q6PJG2 1045 aa10.38□□□□□ -0.75
SRGAP1-204ENST00000542381 WFDC12Q8WWY7 111 aa10.38□□□□□ -0.75
SRGAP1-204ENST00000542381 RARAP10276 462 aa10.37□□□□□ -0.75
SRGAP1-204ENST00000542381 WEE1P30291 646 aa10.37□□□□□ -0.75
SRGAP1-204ENST00000542381 IREB2P48200 963 aaKnown RBP10.37□□□□□ -0.75
SRGAP1-204ENST00000542381 HFE2Q6ZVN8 426 aa10.37□□□□□ -0.75
SRGAP1-204ENST00000542381 WFDC8Q8IUA0 241 aa10.37□□□□□ -0.75
SRGAP1-204ENST00000542381 DTWD1Q8N5C7 304 aa10.37□□□□□ -0.75
SRGAP1-204ENST00000542381 OPLAHO14841 1288 aa10.36□□□□□ -0.75
SRGAP1-204ENST00000542381 NOS3P29474 1203 aa10.36□□□□□ -0.75
SRGAP1-204ENST00000542381 GPLD1P80108 840 aa10.36□□□□□ -0.75
SRGAP1-204ENST00000542381 LRP8Q14114 963 aa10.36□□□□□ -0.75
SRGAP1-204ENST00000542381 C11orf91Q3C1V1 193 aa10.36□□□□□ -0.75
SRGAP1-204ENST00000542381 NBPF11Q86T75 865 aa10.36□□□□□ -0.75
SRGAP1-204ENST00000542381 HYAL3O43820 417 aaPredicted RBP10.35□□□□□ -0.75
SRGAP1-204ENST00000542381 DEAF1O75398 565 aaPredicted RBP10.35□□□□□ -0.75
SRGAP1-204ENST00000542381 TTC9Q92623 222 aa10.35□□□□□ -0.75
SRGAP1-204ENST00000542381 SMG9Q9H0W8 520 aaKnown RBP10.35□□□□□ -0.75
SRGAP1-204ENST00000542381 FOXO3O43524 673 aa10.34□□□□□ -0.75
SRGAP1-204ENST00000542381 MYO19Q96H55 970 aa10.34□□□□□ -0.75
SRGAP1-204ENST00000542381 C11orf16Q9NQ32 467 aa10.34□□□□□ -0.75
SRGAP1-204ENST00000542381 LRFN2Q9ULH4 789 aa10.34□□□□□ -0.75
SRGAP1-204ENST00000542381 RTCBQ9Y3I0 505 aaKnown RBP10.34□□□□□ -0.75
SRGAP1-204ENST00000542381 VTI1AQ96AJ9 217 aa10.33□□□□□ -0.76
SRGAP1-204ENST00000542381 MEGF10Q96KG7 1140 aa10.33□□□□□ -0.76
SRGAP1-204ENST00000542381 IGF2-ASQ6U949 168 aa10.32□□□□□ -0.76
SRGAP1-204ENST00000542381 J3QW42 95 aa10.31□□□□□ -0.76
SRGAP1-204ENST00000542381 EIF2AK2P19525 551 aaKnown RBP10.31□□□□□ -0.76
SRGAP1-204ENST00000542381 NRLP54845 237 aa10.31□□□□□ -0.76
SRGAP1-204ENST00000542381 TLR7Q9NYK1 1049 aaKnown RBP10.31□□□□□ -0.76
SRGAP1-204ENST00000542381 XYLBO75191 536 aa10.3□□□□□ -0.76
SRGAP1-204ENST00000542381 RGL4Q8IZJ4 473 aa10.3□□□□□ -0.76
SRGAP1-204ENST00000542381 CMTR1Q8N1G2 835 aaKnown RBP10.3□□□□□ -0.76
SRGAP1-204ENST00000542381 A6NJR5 290 aa10.29□□□□□ -0.76
SRGAP1-204ENST00000542381 DLL1O00548 723 aa10.29□□□□□ -0.76
SRGAP1-204ENST00000542381 EGFRP00533 1210 aa10.29□□□□□ -0.76
SRGAP1-204ENST00000542381 CDCA8Q53HL2 280 aa10.29□□□□□ -0.76
SRGAP1-204ENST00000542381 TREML1Q86YW5 311 aa10.29□□□□□ -0.76
SRGAP1-204ENST00000542381 FAM200AQ8TCP9 573 aa10.29□□□□□ -0.76
SRGAP1-204ENST00000542381 ARID4AP29374 1257 aaPredicted RBP10.28□□□□□ -0.76
SRGAP1-204ENST00000542381 CFAP70Q5T0N1 1121 aa10.28□□□□□ -0.76
SRGAP1-204ENST00000542381 PLD4Q96BZ4 506 aa10.28□□□□□ -0.76
SRGAP1-204ENST00000542381 LOC102724428A0A0B4J2F2 783 aa10.27□□□□□ -0.77
SRGAP1-204ENST00000542381 MMP20O60882 483 aa10.27□□□□□ -0.77
SRGAP1-204ENST00000542381 ALX3O95076 343 aa10.27□□□□□ -0.77
SRGAP1-204ENST00000542381 SIK1P57059 783 aa10.27□□□□□ -0.77
SRGAP1-204ENST00000542381 COX20Q5RI15 118 aa10.27□□□□□ -0.77
SRGAP1-204ENST00000542381 KCNMB2Q9Y691 235 aa10.27□□□□□ -0.77
SRGAP1-204ENST00000542381 FKBP5Q13451 457 aaPredicted RBP10.26□□□□□ -0.77
SRGAP1-204ENST00000542381 GDF6Q6KF10 455 aaPredicted RBP10.26□□□□□ -0.77
SRGAP1-204ENST00000542381 PRR23CQ6ZRP0 262 aa10.26□□□□□ -0.77
SRGAP1-204ENST00000542381 NSUN5Q96P11 429 aaKnown RBP10.26□□□□□ -0.77
SRGAP1-204ENST00000542381 PSAPP07602 524 aa10.25□□□□□ -0.77
SRGAP1-204ENST00000542381 PRIMPOLQ96LW4 560 aa10.25□□□□□ -0.77
SRGAP1-204ENST00000542381 AKTIPQ9H8T0 292 aa10.25□□□□□ -0.77
SRGAP1-204ENST00000542381 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.25□□□□□ -0.77
SRGAP1-204ENST00000542381 RNF112Q9ULX5 631 aa10.25□□□□□ -0.77
SRGAP1-204ENST00000542381 DZIP1LQ8IYY4 767 aaKnown RBP10.24□□□□□ -0.77
SRGAP1-204ENST00000542381 IL22RA1Q8N6P7 574 aa10.24□□□□□ -0.77
SRGAP1-204ENST00000542381 RFX1P22670 979 aa10.23□□□□□ -0.77
SRGAP1-204ENST00000542381 GHRHP01286 108 aa10.22□□□□□ -0.77
SRGAP1-204ENST00000542381 ETFBKMTQ8IXQ9 262 aa10.22□□□□□ -0.77
SRGAP1-204ENST00000542381 SAP130Q9H0E3 1048 aa10.22□□□□□ -0.77
SRGAP1-204ENST00000542381 NOVA2Q9UNW9 492 aaKnown RBP10.22□□□□□ -0.77
SRGAP1-204ENST00000542381 TRIM33Q9UPN9 1127 aa10.22□□□□□ -0.77
SRGAP1-204ENST00000542381 F8W735 103 aaPredicted RBP10.21□□□□□ -0.77
SRGAP1-204ENST00000542381 SETDB1Q15047 1291 aa10.21□□□□□ -0.77
SRGAP1-204ENST00000542381 TMEM132AQ24JP5 1023 aa10.21□□□□□ -0.77
SRGAP1-204ENST00000542381 FAM26DQ5JW98 314 aa10.21□□□□□ -0.77
SRGAP1-204ENST00000542381 TMEM130Q8N3G9 435 aa10.21□□□□□ -0.77
SRGAP1-204ENST00000542381 MRPL18Q9H0U6 180 aaKnown RBP10.21□□□□□ -0.77
SRGAP1-204ENST00000542381 PRMT3O60678 531 aa10.2□□□□□ -0.78
SRGAP1-204ENST00000542381 HOXD8P13378 290 aaPredicted RBP10.2□□□□□ -0.78
SRGAP1-204ENST00000542381 TRIP4Q15650 581 aaPredicted RBP10.2□□□□□ -0.78
SRGAP1-204ENST00000542381 KRTAP1-3Q8IUG1 177 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms