RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 PRKD2Q9BZL6 878 aa5.23□□□□□ -1.57
SNHG1-219ENST00000542112 ANTXR1Q9H6X2 564 aa5.23□□□□□ -1.57
SNHG1-219ENST00000542112 DIAPH3Q9NSV4 1193 aa5.23□□□□□ -1.57
SNHG1-219ENST00000542112 CHMP5Q9NZZ3 219 aa5.23□□□□□ -1.57
SNHG1-219ENST00000542112 CWC15Q9P013 229 aaKnown RBP5.23□□□□□ -1.57
SNHG1-219ENST00000542112 PKD2L1Q9P0L9 805 aa5.23□□□□□ -1.57
SNHG1-219ENST00000542112 SERTAD1Q9UHV2 236 aa5.23□□□□□ -1.57
SNHG1-219ENST00000542112 ANAPC4Q9UJX5 808 aa5.23□□□□□ -1.57
SNHG1-219ENST00000542112 AMOTL2Q9Y2J4 779 aa5.23□□□□□ -1.57
SNHG1-219ENST00000542112 ERCC6Q03468 1493 aa5.23□□□□□ -1.57
SNHG1-219ENST00000542112 ARHGAP35Q9NRY4 1499 aa5.23□□□□□ -1.57
SNHG1-219ENST00000542112 SAMD9Q5K651 1589 aa5.23□□□□□ -1.57
SNHG1-219ENST00000542112 FHAD1B1AJZ9 1412 aa5.23□□□□□ -1.57
SNHG1-219ENST00000542112 AQRO60306 1485 aaKnown RBP eCLIP5.22□□□□□ -1.572e-14■■■■■ 45.6
SNHG1-219ENST00000542112 GRIN2BQ13224 1484 aa5.22□□□□□ -1.57
SNHG1-219ENST00000542112 ATAD2Q6PL18 1390 aa5.22□□□□□ -1.57
SNHG1-219ENST00000542112 DHX16O60231 1041 aaKnown RBP5.22□□□□□ -1.57
SNHG1-219ENST00000542112 LGR5O75473 907 aa5.22□□□□□ -1.57
SNHG1-219ENST00000542112 REC8O95072 547 aa5.22□□□□□ -1.57
SNHG1-219ENST00000542112 ABL1P00519 1130 aa5.22□□□□□ -1.57
SNHG1-219ENST00000542112 SETSIPP0DME0 302 aa5.22□□□□□ -1.57
SNHG1-219ENST00000542112 SMTNP53814 917 aa5.22□□□□□ -1.57
SNHG1-219ENST00000542112 CBX1P83916 185 aa5.22□□□□□ -1.57
SNHG1-219ENST00000542112 SF3B2Q13435 895 aaKnown RBP5.22□□□□□ -1.57
SNHG1-219ENST00000542112 FKBP5Q13451 457 aaPredicted RBP5.22□□□□□ -1.57
SNHG1-219ENST00000542112 MTFR1Q15390 333 aa5.22□□□□□ -1.57
SNHG1-219ENST00000542112 TERF2Q15554 542 aa5.22□□□□□ -1.57
SNHG1-219ENST00000542112 CT47A1Q5JQC4 288 aaPredicted RBP5.22□□□□□ -1.57
SNHG1-219ENST00000542112 LRCH2Q5VUJ6 765 aa5.22□□□□□ -1.57
SNHG1-219ENST00000542112 Q6ZVU0 165 aa5.22□□□□□ -1.57
SNHG1-219ENST00000542112 CENPQQ7L2Z9 268 aaPredicted RBP5.22□□□□□ -1.57
SNHG1-219ENST00000542112 CYP4X1Q8N118 509 aa5.22□□□□□ -1.57
SNHG1-219ENST00000542112 TMTC2Q8N394 836 aa5.22□□□□□ -1.57
SNHG1-219ENST00000542112 RNF217Q8TC41 542 aa5.22□□□□□ -1.57
SNHG1-219ENST00000542112 SNRNP27Q8WVK2 155 aaKnown RBP5.22□□□□□ -1.57
SNHG1-219ENST00000542112 ERCC4Q92889 916 aaPredicted RBP5.22□□□□□ -1.57
SNHG1-219ENST00000542112 VTI1AQ96AJ9 217 aa5.22□□□□□ -1.57
SNHG1-219ENST00000542112 PDLIM2Q96JY6 352 aa5.22□□□□□ -1.57
SNHG1-219ENST00000542112 ESYT1Q9BSJ8 1104 aa5.22□□□□□ -1.57
SNHG1-219ENST00000542112 PANK2Q9BZ23 570 aa5.22□□□□□ -1.57
SNHG1-219ENST00000542112 SLKQ9H2G2 1235 aaPredicted RBP5.22□□□□□ -1.57
SNHG1-219ENST00000542112 DEF6Q9H4E7 631 aa5.22□□□□□ -1.57
SNHG1-219ENST00000542112 SUDS3Q9H7L9 328 aaPredicted RBP5.22□□□□□ -1.57
SNHG1-219ENST00000542112 SCHIP1Q9P0W5 487 aaPredicted RBP5.22□□□□□ -1.57
SNHG1-219ENST00000542112 BIN2Q9UBW5 565 aaPredicted RBP5.22□□□□□ -1.57
SNHG1-219ENST00000542112 CHD1O14646 1710 aa5.22□□□□□ -1.57
SNHG1-219ENST00000542112 CLIP1P30622 1438 aa5.22□□□□□ -1.57
SNHG1-219ENST00000542112 RRBP1Q9P2E9 1410 aaKnown RBP5.22□□□□□ -1.57
SNHG1-219ENST00000542112 NCOA2Q15596 1464 aa5.21□□□□□ -1.58
SNHG1-219ENST00000542112 INSRP06213 1382 aa5.21□□□□□ -1.58
SNHG1-219ENST00000542112 KANK1Q14678 1352 aa5.21□□□□□ -1.58
SNHG1-219ENST00000542112 NPC1L1Q9UHC9 1359 aa5.21□□□□□ -1.58
SNHG1-219ENST00000542112 TTC24A2A3L6 582 aaPredicted RBP5.21□□□□□ -1.58
SNHG1-219ENST00000542112 A6NJY4 79 aa5.21□□□□□ -1.58
SNHG1-219ENST00000542112 CDK2AP1O14519 115 aa5.21□□□□□ -1.58
SNHG1-219ENST00000542112 ICMTO60725 284 aa5.21□□□□□ -1.58
SNHG1-219ENST00000542112 STAU1O95793 577 aaKnown RBP5.21□□□□□ -1.58
SNHG1-219ENST00000542112 SLFN14P0C7P3 912 aa5.21□□□□□ -1.58
SNHG1-219ENST00000542112 CAPN2P17655 700 aa5.21□□□□□ -1.58
SNHG1-219ENST00000542112 CASQ1P31415 396 aa5.21□□□□□ -1.58
SNHG1-219ENST00000542112 SCNN1AP37088 669 aa5.21□□□□□ -1.58
SNHG1-219ENST00000542112 NASPP49321 788 aaPredicted RBP5.21□□□□□ -1.58
SNHG1-219ENST00000542112 FOXK2Q01167 660 aa5.21□□□□□ -1.58
SNHG1-219ENST00000542112 FKBP4Q02790 459 aaKnown RBP eCLIP5.21□□□□□ -1.58
SNHG1-219ENST00000542112 CHAF1AQ13111 956 aaPredicted RBP5.21□□□□□ -1.58
SNHG1-219ENST00000542112 CLN3Q13286 438 aa5.21□□□□□ -1.58
SNHG1-219ENST00000542112 SLC9A9Q8IVB4 645 aa5.21□□□□□ -1.58
SNHG1-219ENST00000542112 GLYCTKQ8IVS8 523 aa5.21□□□□□ -1.58
SNHG1-219ENST00000542112 SUGP1Q8IWZ8 645 aaKnown RBP5.21□□□□□ -1.58
SNHG1-219ENST00000542112 NBPF15Q8N660 670 aa5.21□□□□□ -1.58
SNHG1-219ENST00000542112 GTF3C2Q8WUA4 911 aaPredicted RBP5.21□□□□□ -1.58
SNHG1-219ENST00000542112 ANKRD7Q92527 254 aa5.21□□□□□ -1.58
SNHG1-219ENST00000542112 GBP4Q96PP9 640 aa5.21□□□□□ -1.58
SNHG1-219ENST00000542112 MKNK1Q9BUB5 465 aa5.21□□□□□ -1.58
SNHG1-219ENST00000542112 TEX13AQ9BXU3 409 aaPredicted RBP5.21□□□□□ -1.58
SNHG1-219ENST00000542112 NUCKS1Q9H1E3 243 aaKnown RBP5.21□□□□□ -1.58
SNHG1-219ENST00000542112 TSPAN10Q9H1Z9 355 aaPredicted RBP5.21□□□□□ -1.58
SNHG1-219ENST00000542112 ARHGEF10LQ9HCE6 1279 aa5.21□□□□□ -1.58
SNHG1-219ENST00000542112 CWC22Q9HCG8 908 aaKnown RBP5.21□□□□□ -1.58
SNHG1-219ENST00000542112 CHMP3Q9Y3E7 222 aa5.21□□□□□ -1.58
SNHG1-219ENST00000542112 MORC2Q9Y6X9 1032 aaPredicted RBP5.21□□□□□ -1.58
SNHG1-219ENST00000542112 ARHGAP31Q2M1Z3 1444 aa5.21□□□□□ -1.58
SNHG1-219ENST00000542112 VPS8Q8N3P4 1428 aa5.21□□□□□ -1.58
SNHG1-219ENST00000542112 A0A1W2PRU2 124 aa5.2□□□□□ -1.58
SNHG1-219ENST00000542112 ANKRD33BA6NCL7 494 aa5.2□□□□□ -1.58
SNHG1-219ENST00000542112 HMGB1P1B2RPK0 211 aaPredicted RBP5.2□□□□□ -1.58
SNHG1-219ENST00000542112 H3BRB1 525 aa5.2□□□□□ -1.58
SNHG1-219ENST00000542112 MPHOSPH10O00566 681 aaKnown RBP5.2□□□□□ -1.58
SNHG1-219ENST00000542112 C21orf2O43822 256 aa5.2□□□□□ -1.58
SNHG1-219ENST00000542112 PPP1R12BO60237 982 aaPredicted RBP5.2□□□□□ -1.58
SNHG1-219ENST00000542112 GDF9O60383 454 aa5.2□□□□□ -1.58
SNHG1-219ENST00000542112 COQ9O75208 318 aa5.2□□□□□ -1.58
SNHG1-219ENST00000542112 ZIC2O95409 532 aaPredicted RBP5.2□□□□□ -1.58
SNHG1-219ENST00000542112 IL2RAP01589 272 aa5.2□□□□□ -1.58
SNHG1-219ENST00000542112 PTGIRP43119 386 aa5.2□□□□□ -1.58
SNHG1-219ENST00000542112 MARSP56192 900 aaKnown RBP5.2□□□□□ -1.58
SNHG1-219ENST00000542112 PSMA6P60900 246 aaKnown RBP5.2□□□□□ -1.58
SNHG1-219ENST00000542112 IRX1P78414 480 aaPredicted RBP5.2□□□□□ -1.58
SNHG1-219ENST00000542112 KIAA2012Q0VF49 1180 aa5.2□□□□□ -1.58
SNHG1-219ENST00000542112 TLR1Q15399 786 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms