RNA–Protein interactions for RNA: ENST00000541960.5

GABARAPL1-210, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 3

Gene GABARAPL1, Length 3,214 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-210ENST00000541960 TIMM10P62072 90 aa21.39■■□□□ 1.02
GABARAPL1-210ENST00000541960 ANAPC15P60006 121 aa21.39■■□□□ 1.01
GABARAPL1-210ENST00000541960 THSD7AQ9UPZ6 1657 aa21.38■■□□□ 1.01
GABARAPL1-210ENST00000541960 HSPA1LP34931 641 aa21.38■■□□□ 1.01
GABARAPL1-210ENST00000541960 SMARCC1Q92922 1105 aaPredicted RBP21.38■■□□□ 1.01
GABARAPL1-210ENST00000541960 TRMT112Q9UI30 125 aaKnown RBP21.38■■□□□ 1.01
GABARAPL1-210ENST00000541960 KCNQ4P56696 695 aa21.38■■□□□ 1.01
GABARAPL1-210ENST00000541960 TTLL11Q8NHH1 800 aa21.38■■□□□ 1.01
GABARAPL1-210ENST00000541960 ZNF609O15014 1411 aa21.38■■□□□ 1.01
GABARAPL1-210ENST00000541960 CAMTA2O94983 1202 aa21.38■■□□□ 1.01
GABARAPL1-210ENST00000541960 PTH1RQ03431 593 aa21.38■■□□□ 1.01
GABARAPL1-210ENST00000541960 NMIQ13287 307 aaPredicted RBP21.38■■□□□ 1.01
GABARAPL1-210ENST00000541960 GPR108Q9NPR9 543 aa21.38■■□□□ 1.01
GABARAPL1-210ENST00000541960 IRS4O14654 1257 aaPredicted RBP21.37■■□□□ 1.01
GABARAPL1-210ENST00000541960 COL5A3P25940 1745 aaPredicted RBP21.37■■□□□ 1.01
GABARAPL1-210ENST00000541960 ST18O60284 1047 aa21.37■■□□□ 1.01
GABARAPL1-210ENST00000541960 FAM182BQ5T319 152 aa21.37■■□□□ 1.01
GABARAPL1-210ENST00000541960 FSD1Q9BTV5 496 aa21.37■■□□□ 1.01
GABARAPL1-210ENST00000541960 GREM2Q9H772 168 aa21.37■■□□□ 1.01
GABARAPL1-210ENST00000541960 NEK4P51957 841 aa21.36■■□□□ 1.01
GABARAPL1-210ENST00000541960 LINC00116Q8NCU8 138 aa21.36■■□□□ 1.01
GABARAPL1-210ENST00000541960 NEUROD6Q96NK8 337 aa21.36■■□□□ 1.01
GABARAPL1-210ENST00000541960 A0A0D9SFI3 127 aa21.36■■□□□ 1.01
GABARAPL1-210ENST00000541960 CTSWP56202 376 aa21.36■■□□□ 1.01
GABARAPL1-210ENST00000541960 RUFY2Q8WXA3 655 aa21.36■■□□□ 1.01
GABARAPL1-210ENST00000541960 IFIT5Q13325 482 aaKnown RBP21.35■■□□□ 1.01
GABARAPL1-210ENST00000541960 RASEFQ8IZ41 740 aa21.35■■□□□ 1.01
GABARAPL1-210ENST00000541960 HAUS7Q99871 368 aa21.35■■□□□ 1.01
GABARAPL1-210ENST00000541960 HSP90AA1P07900 732 aaKnown RBP21.35■■□□□ 1.01
GABARAPL1-210ENST00000541960 SUSD4Q5VX71 490 aa21.35■■□□□ 1.01
GABARAPL1-210ENST00000541960 CHGBP05060 677 aa21.34■■□□□ 1.01
GABARAPL1-210ENST00000541960 A0A1B0GUL7 405 aa21.34■■□□□ 1.01
GABARAPL1-210ENST00000541960 ITGA6P23229 1130 aa21.34■■□□□ 1.01
GABARAPL1-210ENST00000541960 KIAA1211Q6ZU35 1233 aa21.34■■□□□ 1.01
GABARAPL1-210ENST00000541960 DNAJC2Q99543 621 aaKnown RBP21.34■■□□□ 1.01
GABARAPL1-210ENST00000541960 SNX14Q9Y5W7 946 aa21.34■■□□□ 1.01
GABARAPL1-210ENST00000541960 UPF3BQ9BZI7 483 aaKnown RBP21.34■■□□□ 1.01
GABARAPL1-210ENST00000541960 SNRKQ9NRH2 765 aa21.34■■□□□ 1.01
GABARAPL1-210ENST00000541960 MYH3P11055 1940 aa21.33■■□□□ 1.01
GABARAPL1-210ENST00000541960 ZNF831Q5JPB2 1677 aa21.33■■□□□ 1.01
GABARAPL1-210ENST00000541960 HIP1O00291 1037 aa21.33■■□□□ 1
GABARAPL1-210ENST00000541960 RIC1Q4ADV7 1423 aa21.33■■□□□ 1
GABARAPL1-210ENST00000541960 CEP126Q9P2H0 1117 aa21.33■■□□□ 1
GABARAPL1-210ENST00000541960 FBXO3Q9UK99 471 aa21.33■■□□□ 1
GABARAPL1-210ENST00000541960 PDE8AO60658 829 aa21.32■■□□□ 1
GABARAPL1-210ENST00000541960 MEX3CQ5U5Q3 659 aaKnown RBP21.32■■□□□ 1
GABARAPL1-210ENST00000541960 MED23Q9ULK4 1368 aa21.32■■□□□ 1
GABARAPL1-210ENST00000541960 TAF7LQ5H9L4 462 aa21.32■■□□□ 1
GABARAPL1-210ENST00000541960 GJD4Q96KN9 370 aaPredicted RBP21.32■■□□□ 1
GABARAPL1-210ENST00000541960 CCDC171Q6TFL3 1326 aa21.32■■□□□ 1
GABARAPL1-210ENST00000541960 FAM177BA6PVY3 158 aa21.31■■□□□ 1
GABARAPL1-210ENST00000541960 DDX46Q7L014 1031 aaKnown RBP21.31■■□□□ 1
GABARAPL1-210ENST00000541960 ZNF589Q86UQ0 364 aaPredicted RBP21.31■■□□□ 1
GABARAPL1-210ENST00000541960 RIPOR2Q9Y4F9 1068 aa21.31■■□□□ 1
GABARAPL1-210ENST00000541960 AFF2P51816 1311 aa21.31■■□□□ 1
GABARAPL1-210ENST00000541960 ADORA1P30542 326 aa21.31■■□□□ 1
GABARAPL1-210ENST00000541960 CIZ1Q9ULV3 898 aaPredicted RBP21.31■■□□□ 1
GABARAPL1-210ENST00000541960 SMIM5Q71RC9 77 aa21.31■■□□□ 1
GABARAPL1-210ENST00000541960 HCLS1P14317 486 aaPredicted RBP21.3■■□□□ 1
GABARAPL1-210ENST00000541960 BTAF1O14981 1849 aa21.3■■□□□ 1
GABARAPL1-210ENST00000541960 ZGPATQ8N5A5 531 aaKnown RBP21.29■■□□□ 1
GABARAPL1-210ENST00000541960 ANKRD18BA2A2Z9 1011 aa21.29■■□□□ 1
GABARAPL1-210ENST00000541960 PRPF40BQ6NWY9 871 aaKnown RBP21.29■■□□□ 1
GABARAPL1-210ENST00000541960 LDHAL6AQ6ZMR3 332 aa21.29■■□□□ 1
GABARAPL1-210ENST00000541960 TMX3Q96JJ7 454 aa21.29■■□□□ 1
GABARAPL1-210ENST00000541960 SH3TC1Q8TE82 1336 aa21.29■■□□□ 1
GABARAPL1-210ENST00000541960 NHSQ6T4R5 1651 aa21.28■■□□□ 1
GABARAPL1-210ENST00000541960 RAB3GAP1Q15042 981 aa21.28■■□□□ 1
GABARAPL1-210ENST00000541960 NECTIN1Q15223 517 aa21.28■■□□□ 1
GABARAPL1-210ENST00000541960 MAP4K1Q92918 833 aa21.28■■□□□ 1
GABARAPL1-210ENST00000541960 UTP14AQ9BVJ6 771 aaKnown RBP21.28■■□□□ 1
GABARAPL1-210ENST00000541960 NIP7Q9Y221 180 aaKnown RBP eCLIP21.28■■□□□ 1
GABARAPL1-210ENST00000541960 KCNB2Q92953 911 aa21.28■■□□□ 1
GABARAPL1-210ENST00000541960 XAGE2Q96GT9 111 aa21.28■■□□□ 1
GABARAPL1-210ENST00000541960 BCORQ6W2J9 1755 aa21.28■■□□□ 1
GABARAPL1-210ENST00000541960 GOLIM4O00461 696 aa21.27■■□□□ 1
GABARAPL1-210ENST00000541960 NTSR2O95665 410 aa21.27■■□□□ 1
GABARAPL1-210ENST00000541960 RBM8AQ9Y5S9 174 aaKnown RBP21.27■■□□□ 1
GABARAPL1-210ENST00000541960 RFX7Q2KHR2 1363 aa21.27■■□□□ 1
GABARAPL1-210ENST00000541960 NOL8Q76FK4 1167 aaKnown RBP21.27■■□□□ 1
GABARAPL1-210ENST00000541960 KBTBD3Q8NAB2 608 aa21.27■■□□□ 1
GABARAPL1-210ENST00000541960 TNPO1Q92973 898 aaKnown RBP21.27■■□□□ 1
GABARAPL1-210ENST00000541960 PAG1Q9NWQ8 432 aa21.27■■□□□ 1
GABARAPL1-210ENST00000541960 EP400Q96L91 3159 aa21.27■■□□□ 1
GABARAPL1-210ENST00000541960 SLFNL1Q499Z3 407 aa21.27■□□□□ 0.99
GABARAPL1-210ENST00000541960 VGLL2Q8N8G2 317 aa21.27■□□□□ 0.99
GABARAPL1-210ENST00000541960 ATRNO75882 1429 aa21.26■□□□□ 0.99
GABARAPL1-210ENST00000541960 CNTNAP4Q9C0A0 1308 aa21.26■□□□□ 0.99
GABARAPL1-210ENST00000541960 ADCK5Q3MIX3 580 aa21.26■□□□□ 0.99
GABARAPL1-210ENST00000541960 PARP10Q53GL7 1025 aa21.26■□□□□ 0.99
GABARAPL1-210ENST00000541960 AEBP2Q6ZN18 517 aaPredicted RBP21.26■□□□□ 0.99
GABARAPL1-210ENST00000541960 SEC62Q99442 399 aaKnown RBP21.26■□□□□ 0.99
GABARAPL1-210ENST00000541960 AKAP2Q9Y2D5 859 aa21.26■□□□□ 0.99
GABARAPL1-210ENST00000541960 DDX60Q8IY21 1712 aaKnown RBP21.26■□□□□ 0.99
GABARAPL1-210ENST00000541960 METTL24Q5JXM2 366 aa21.26■□□□□ 0.99
GABARAPL1-210ENST00000541960 LRP5O75197 1615 aa21.26■□□□□ 0.99
GABARAPL1-210ENST00000541960 TTC14Q96N46 770 aa21.25■□□□□ 0.99
GABARAPL1-210ENST00000541960 IFIT1P09914 478 aaKnown RBP21.25■□□□□ 0.99
GABARAPL1-210ENST00000541960 CPA1P15085 419 aa21.25■□□□□ 0.99
GABARAPL1-210ENST00000541960 MCM4P33991 863 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms